| Commit message (Collapse) | Author | Age |
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* gnu/packages/bioinformatics.scm (r-gostats): Update to 2.56.0.
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* gnu/packages/bioinformatics.scm (r-category): Update to 2.56.0.
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* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.52.0.
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* gnu/packages/bioinformatics.scm (r-rbgl): Update to 1.66.0.
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* gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.32.0.
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* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.36.0.
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* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.30.0.
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* gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.72.0.
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* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.6.1.
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* gnu/packages/bioconductor.scm (r-ncdfflow): [arguments]: Avoid to have a
plain directory on the list of libraries to link.
Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
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* gnu/packages/bioconductor.scm (r-cytoml): [arguments]: Avoid to have
a plain directory on the list of libraries to link.
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* gnu/packages/bioconductor.scm (r-flowworkspace): [arguments]: Avoid to have
a plain directory on the list of libraries to link.
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* gnu/packages/bioconductor.scm (r-hdf5array): [arguments]: Avoid to have a
plain directory on the list of libraries to link.
Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
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* gnu/packages/bioconductor.scm (r-cytolib): [arguments]: Avoid to have a
plain directory on the list of libraries to link.
Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
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* gnu/packages/bioconductor.scm (r-rhdf5lib)[arguments]: Fix build.
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* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.18.0.
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* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.16.0.
[propagated-inputs]: Add r-matrixgenerics; remove r-matrixstats.
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* gnu/packages/bioconductor.scm (r-matrixgenerics): New variable.
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* gnu/packages/cran.scm (r-ggalluvial): New variable.
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* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.24.0.
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* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.28.0.
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* gnu/packages/bioconductor.scm (r-hitc): Update to 1.34.0.
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* gnu/packages/bioconductor.scm (r-fithic): Update to 1.16.0.
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* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.30.0.
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* gnu/packages/bioconductor.scm (r-rgraphviz): Update to 2.34.0.
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* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.52.0.
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* gnu/packages/bioconductor.scm (r-fourcseq): Update to 1.24.0.
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* gnu/packages/bioconductor.scm (r-icens): Update to 1.62.0.
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* gnu/packages/bioconductor.scm (r-m3c): Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-rgreat): Update to 1.22.0.
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* gnu/packages/bioconductor.scm (r-biodist): Update to 1.62.0.
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* gnu/packages/bioconductor.scm (r-biocworkflowtools): Update to 1.16.0.
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* gnu/packages/bioconductor.scm (r-biocset): Update to 1.4.0.
[propagated-inputs]: Add r-s4vectors; remove r-rtracklayer.
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* gnu/packages/bioconductor.scm (r-biocio): New variable.
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* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.8.0.
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* gnu/packages/bioconductor.scm (r-biocor): Update to 1.14.0.
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* gnu/packages/bioconductor.scm (r-bioconcotk): Update to 1.10.0.
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* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.16.0.
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* gnu/packages/bioconductor.scm (r-experimenthub): Update to 1.16.0.
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* gnu/packages/bioconductor.scm (r-biocgraph): Update to 1.52.0.
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* gnu/packages/bioconductor.scm (r-bioccasestudies): Update to 1.52.0.
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* gnu/packages/bioconductor.scm (r-ebarrays): Update to 2.54.0.
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* gnu/packages/bioconductor.scm (r-reactomepa): Update to 1.34.0.
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* gnu/packages/bioconductor.scm (r-graphite): Update to 1.36.0.
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* gnu/packages/bioconductor.scm (r-biobroom): Update to 1.22.0.
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* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.28.0.
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* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.42.0.
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* gnu/packages/bioconductor.scm (r-bigpint): Update to 1.6.0.
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* gnu/packages/bioconductor.scm (r-bigmemoryextras): Update to 1.38.0.
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