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authorzimoun <zimon.toutoune@gmail.com>2020-10-30 15:56:38 +0100
committerRicardo Wurmus <rekado@elephly.net>2020-12-09 12:12:34 +0100
commitfeb0cbf402e33880e74eb0576dd51083462519d9 (patch)
treedf3a2e0fd5dabdafbfdf7f312954ba184c055226 /gnu
parentff4834c065a3b0d90021fbbba2f8306ade9ce691 (diff)
downloadguix-patches-feb0cbf402e33880e74eb0576dd51083462519d9.tar
guix-patches-feb0cbf402e33880e74eb0576dd51083462519d9.tar.gz
gnu: r-biocset: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.4.0. [propagated-inputs]: Add r-s4vectors; remove r-rtracklayer.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioconductor.scm11
1 files changed, 7 insertions, 4 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index a854fef82e..b938729b0e 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -8076,24 +8076,27 @@ analytics on packages.")
(define-public r-biocset
(package
(name "r-biocset")
- (version "1.2.2")
+ (version "1.4.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "BiocSet" version))
(sha256
(base32
- "041hq3rp0kv7kjwcjjrksk8lw3sj6j1v3wdcr8z611k0g0z6p0cj"))))
+ "16pjg09i0j5qk9s9qzm6fq5q0bgwb4wgqvp6scs06ajgrr07qjqg"))))
(properties `((upstream-name . "BiocSet")))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
+ ("r-biocio" ,r-biocio)
("r-dplyr" ,r-dplyr)
("r-keggrest" ,r-keggrest)
+ ("r-ontologyindex" ,r-ontologyindex)
("r-plyr" ,r-plyr)
("r-rlang" ,r-rlang)
- ("r-rtracklayer" ,r-rtracklayer)
- ("r-tibble" ,r-tibble)))
+ ("r-s4vectors" ,r-s4vectors)
+ ("r-tibble" ,r-tibble)
+ ("r-tidyr" ,r-tidyr)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page