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* gnu: Fix package references.Efraim Flashner2020-09-30
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/algebra.scm (iml)[inputs]: Correctly refer to package inputs. * gnu/packages/astronomy.scm (xplanet), * gnu/packages/audio.scm (redkite, libaudec, lv2lint, lv2toweb), * gnu/packages/bioconductor.scm (r-cummerbund), * gnu/packages/chicken.scm (chicken), * gnu/packages/conky.scm (conky), * gnu/packages/cran.scm (r-latex2exp), * gnu/packages/crates-io.scm (rust-rgb), * gnu/packages/databases.scm (mariadb), * gnu/packages/diffoscope.scm (reprotest), * gnu/packages/file-systems.scm (glusterfs), * gnu/packages/finance.scm (electron-cash), * gnu/packages/games.scm (rinutils, ksudoku, kdiamond, kigo), * gnu/packages/geo.scm (grass), * gnu/packages/gnome.scm (libmediaart, gnome-contacts, geoclue), * gnu/packages/gnucash.scm (aqbanking), * gnu/packages/image.scm (mtpaint), * gnu/packages/kde-internet.scm (kopete, ktorrent), * gnu/packages/kde-utils.scm (kmousetool, kmouth, kronometer), * gnu/packages/linphone.scm (liblinphone), * gnu/packages/maths.scm (ppl), * gnu/packages/mercury.scm (mercury-minimal), * gnu/packages/music.scm (bjumblr, bschaffl, lsp-plugins, spectacle-analyzer, helm, tap-lv2, wolf-shaper, shiru-lv2), * gnu/packages/networking.scm (restinio), * gnu/packages/prolog.scm (swi-prolog), * gnu/packages/python-web.scm (gunicorn), * gnu/packages/python-xyz.scm (python-docusign-esign), * gnu/packages/ruby.scm (ruby-cucumber, ruby_version, ruby-addressable), * gnu/packages/sagemath.scm (python-cypari2), * gnu/packages/skarnet.scm (s6-linux-init), * gnu/packages/vpn.scm (sshuttle), * gnu/packages/web.scm (libcyaml), * gnu/packages/xdisorg.scm (kbdd), * gnu/packages/xorg.scm (xpra): Same.
* gnu: r-chippeakanno: Update to 3.22.4.Roel Janssen2020-09-28
| | | | * gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.22.4.
* gnu: Fix typoes in package descriptions.Tobias Geerinckx-Rice2020-09-23
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/audio.scm (caps-plugins-lv2)[synopsis]: Fix typo. * gnu/packages/bioconductor.scm (r-karyoploter, r-anota, r-gcrma) (r-bigmemoryextras)[description]: Likewise. * gnu/packages/cran.scm (r-geometry)[synopsis]: Likewise. (r-stringdist, r-patchwork, r-depth, r-tea)[description]: Likewise. * gnu/packages/crates-io.scm (rust-assert-fs-0.11, rust-notify-4) (rust-tokio-fs-0.1)[synopsis, description]: Likewise. (rust-blas-sys-0.7)[description]: Likewise. (rust-fs-extra-1.1, rust-xattr-0.2)[synopsis]: Likewise. * gnu/packages/databases.scm (perl-mysql-config)[description]: Likewise. * gnu/packages/disk.scm (hddtemp)[description]: Likewise. * gnu/packages/django.scm (python-djangorestframework)[description]: Likewise. * gnu/packages/documentation.scm (doc++)[description]: Likewise. * gnu/packages/emacs-xyz.scm (emacs-kakoune, emacs-pyim-basedict, eless) (emacs-scpaste)[description]: Likewise. * gnu/packages/file-systems.scm (dbxfs)[description]: Likewise. * gnu/packages/finance.scm (python-stdnum)[description]: Likewise. * gnu/packages/fontutils.scm (woff2)[description]: Likewise. * gnu/packages/games.scm (openttd-opengfx)[description]: Likewise. * gnu/packages/gnome-xyz.scm (gnome-shell-extension-topicons-redux) [description]: Likewise. * gnu/packages/gnome.scm (libgrss)[description]: Likewise. * gnu/packages/golang.scm (go-github-com-mitchellh-reflectwalk) [description]: Likewise. (go-github-com-go-git-go-billy)[synopsis, description]: Likewise. * gnu/packages/haskell-check.scm (ghc-inspection-testing)[description]: Likewise. * gnu/packages/haskell-web.scm (ghc-yesod-form)[description]: Likewise. * gnu/packages/haskell-xyz.scm (ghc-hex)[description]: Likewise. * gnu/packages/hyperledger.scm (hyperledger-iroha-ed25519)[description]: Likewise. * gnu/packages/java.scm (java-mail)[synopsis]: Likewise. (java-native-access-platform)[description]: Likewise. * gnu/packages/kde-frameworks.scm (kactivities-stats)[description]: Likewise. * gnu/packages/kde-utils.scm (krusader)[description]: Likewise. * gnu/packages/language.scm (praat)[description]: Likewise. * gnu/packages/linux.scm (light)[description]: Likewise. * gnu/packages/lisp-xyz.scm (sbcl-hu.dwim.defclass-star)[description]: Likewise. * gnu/packages/mail.scm (dovecot-trees, sieve-connect)[description]: Likewise. * gnu/packages/ocaml.scm (ocaml-opam-file-format, ocaml-cppo) (ocaml4.07-ppx-variants-conv)[description]: Likewise. * gnu/packages/perl.scm (perl-convert-binhex)[description]: Likewise. * gnu/packages/python-crypto.scm (python-ecdsa)[description]: Likewise. * gnu/packages/python-web.scm (python-html5lib)[synopsis, description]: Likewise. (python-venusian)[synopsis]: Likewise. * gnu/packages/python-xyz.scm (python-readlike, python-gssapi) (python-flufl-i18n)[description]: Likewise. (python-pox, python-watchdog, python-xattr)[synopsis, description]: Likewise. * gnu/packages/ruby.scm (ruby-sorcerer)[description]: Likewise. * gnu/packages/rust-apps.scm (watchexec)[description]: Likewise. * gnu/packages/rust.scm (mrustc)[synopsis]: Likewise. * gnu/packages/shells.scm (s-shell)[description]: Likewise. * gnu/packages/ssh.scm (sshpass)[description]: Likewise. * gnu/packages/terminals.scm (beep)[description]: Likewise. * gnu/packages/web.scm (perl-lwp-useragent-cached)[description]: Likewise. * gnu/packages/wv.scm (wv)[description]: Likewise.
* gnu: r-wgcna: Move to (gnu packages bioconductor).Ricardo Wurmus2020-09-14
| | | | | | | This is a follow-up to commit 6e0ab26f31cd2bb7e5d88719d3d458df68c1963e. * gnu/packages/cran.scm (r-wgcna): Move from here... * gnu/packages/bioconductor.scm (r-wgcna): ...to here.
* gnu: r-fithic: Move to (gnu packages bioconductor).zimoun2020-09-14
| | | | | | | * gnu/packages/bioinformatics.scm (r-fithic): Move from here... * gnu/packages/bioconductor.scm (r-fithic): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: r-hitc: Move to (gnu packages bioconductor).zimoun2020-09-14
| | | | | | | * gnu/packages/bioinformatics.scm (r-hitc): Move from here... * gnu/packages/bioconductor.scm (r-hitc): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: r-hdf5array: Move to (gnu packages bioconductor).zimoun2020-09-14
| | | | | | | * gnu/packages/bioinformatics.scm (r-hdf5array): Move from here... * gnu/packages/bioconductor.scm (r-hdf5array): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: r-rhdf5lib: Move to (gnu packages bioconductor).zimoun2020-09-14
| | | | | | | * gnu/packages/bioinformatics.scm (r-rhdf5lib): Move from here... * gnu/packages/bioconductor.scm (r-rhdf5lib): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: r-beachmat: Move to (gnu packages bioconductor).zimoun2020-09-14
| | | | | | | * gnu/packages/bioinformatics.scm (r-beachmat): Move from here... * gnu/packages/bioconductor.scm (r-beachmat): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: r-singlecellexperiment: Move to (gnu packages bioconductor).zimoun2020-09-14
| | | | | | | * gnu/packages/bioinformatics.scm (r-singlecellexperiment): Move from here... * gnu/packages/bioconductor.scm (r-singlecellexperiment): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: r-scater: Move to (gnu packages bioconductor).zimoun2020-09-14
| | | | | | | * gnu/packages/bioinformatics.scm (r-scater): Move from here... * gnu/packages/bioconductor.scm (r-scater): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: r-scran: Move to (gnu packages bioconductor).zimoun2020-09-14
| | | | | | | * gnu/packages/bioinformatics.scm (r-scran): Move from here... * gnu/packages/bioconductor.scm (r-scran): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: r-delayedmatrixstats: Move to (gnu packages bioconductor).zimoun2020-09-14
| | | | | | | * gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Move from here... * gnu/packages/bioconductor.scm (r-delayedmatrixstats): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: r-rgraphviz: Move to (gnu packages bioconductor).zimoun2020-09-14
| | | | | | | * gnu/packages/graph.scm (r-rgraphviz): Move from here... * gnu/packages/bioconductor.scm (r-rgraphviz): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: r-preprocesscore: Move to (gnu packages bioconductor).zimoun2020-09-14
| | | | | | | * gnu/packages/statistics.scm (r-preprocesscore): Move from here... * gnu/packages/bioconductor.scm (r-preprocesscore): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: r-fourcseq: Move to (gnu packages bioconductor).zimoun2020-09-14
| | | | | | | * gnu/packages/cran.scm (r-fourcseq): Move from here... * gnu/packages/bioconductor.scm (r-fourcseq): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: r-activedriverwgs: Update to 1.1.0.Ricardo Wurmus2020-09-14
| | | | | | * gnu/packages/bioconductor.scm (r-activedriverwgs): Update to 1.1.0. [propagated-inputs]: Remove r-plyr. [native-inputs]: Add r-knitr.
* gnu: r-codedepends: Comment why it is in bioconductor.scm.zimoun2020-09-11
| | | | * gnu/packages/bioconductor.scm (r-codedepends): Add comment.
* gnu: Add r-fhtest.Peter Lo2020-09-11
| | | | | | * gnu/packages/bioconductor.scm (r-fhtest): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: Add r-interval.Peter Lo2020-09-11
| | | | | | * gnu/packages/bioconductor.scm (r-interval): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: Add r-icens.Peter Lo2020-09-11
| | | | | | * gnu/packages/bioconductor.scm (r-icens): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: r-cicero: Update to 1.6.2.Ricardo Wurmus2020-09-04
| | | | * gnu/packages/bioconductor.scm (r-cicero): Update to 1.6.2.
* gnu: r-mixomics: Update to 6.12.2.Ricardo Wurmus2020-09-04
| | | | * gnu/packages/bioconductor.scm (r-mixomics): Update to 6.12.2.
* gnu: r-atacseqqc: Update to 1.12.4.Ricardo Wurmus2020-09-04
| | | | * gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.12.4.
* gnu: r-gkmsvm: Update to 0.81.0.Ricardo Wurmus2020-09-04
| | | | * gnu/packages/bioconductor.scm (r-gkmsvm): Update to 0.81.0.
* gnu: r-chippeakanno: Update to 3.22.3.Ricardo Wurmus2020-09-04
| | | | * gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.22.3.
* gnu: r-biocset: Update to 1.2.2.Ricardo Wurmus2020-08-20
| | | | * gnu/packages/bioconductor.scm (r-biocset): Update to 1.2.2.
* gnu: r-experimenthub: Update to 1.14.2.Ricardo Wurmus2020-08-20
| | | | * gnu/packages/bioconductor.scm (r-experimenthub): Update to 1.14.2.
* gnu: r-variancepartition: Update to 1.18.3.Ricardo Wurmus2020-08-20
| | | | * gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.18.3.
* gnu: r-rsubread: Update to 2.2.6.Ricardo Wurmus2020-08-20
| | | | * gnu/packages/bioconductor.scm (r-rsubread): Update to 2.2.6.
* gnu: r-rbowtie: Update to 1.28.1.Ricardo Wurmus2020-08-20
| | | | * gnu/packages/bioconductor.scm (r-rbowtie): Update to 1.28.1.
* gnu: r-biocfilecache: Update to 1.12.1.Ricardo Wurmus2020-08-20
| | | | * gnu/packages/bioconductor.scm (r-biocfilecache): Update to 1.12.1.
* gnu: r-rbowtie2: Update to 1.10.1.Ricardo Wurmus2020-08-20
| | | | * gnu/packages/bioconductor.scm (r-rbowtie2): Update to 1.10.1.
* gnu: r-motifstack: Update to 1.32.1.Ricardo Wurmus2020-08-20
| | | | * gnu/packages/bioconductor.scm (r-motifstack): Update to 1.32.1.
* gnu: r-clusterprofiler: Update to 3.16.1.Ricardo Wurmus2020-08-20
| | | | | * gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.16.1. [propagated-inputs]: Add r-rlang.
* gnu: r-gosemsim: Update to 2.14.1.Ricardo Wurmus2020-08-20
| | | | * gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.14.1.
* gnu: r-oligo: Update to 1.52.1.Ricardo Wurmus2020-08-20
| | | | * gnu/packages/bioconductor.scm (r-oligo): Update to 1.52.1.
* gnu: r-oligoclasses: Update to 1.50.4.Ricardo Wurmus2020-08-20
| | | | * gnu/packages/bioconductor.scm (r-oligoclasses): Update to 1.50.4.
* gnu: r-abseqr: Add pandoc-citeproc.Ricardo Wurmus2020-08-16
| | | | * gnu/packages/bioconductor.scm (r-abseqr)[inputs]: Add pandoc-citeproc.
* gnu: r-abseqr: Use pandoc instead of ghc-pandoc.Ricardo Wurmus2020-08-16
| | | | | * gnu/packages/bioconductor.scm (r-abseqr)[inputs]: Replace ghc-pandoc with pandoc.
* gnu: r-nmf: Update to 0.23.0.Ricardo Wurmus2020-08-12
| | | | | * gnu/packages/bioconductor.scm (r-nmf): Update to 0.23.0. [native-inputs]: Add r-knitr.
* gnu: Add r-m3c.Ricardo Wurmus2020-08-11
| | | | * gnu/packages/bioconductor.scm (r-m3c): New variable.
* gnu: Use HTTPS for github.com (and subdomains) home pages.Tobias Geerinckx-Rice2020-07-16
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/bioconductor.scm (r-qvalue)[home-page]: Use HTTPS and follow permanent redirection. * gnu/packages/check.scm (python-codecov, python-nosexcover) [home-page]: Likewise. * gnu/packages/cran.scm (r-ffbase, r-ggrepel, r-valr) [home-page]: Likewise. * gnu/packages/crates-io.scm (rust-block-0.1, rust-dispatch-0.1) (rust-objc-0.2, rust-objc-exception-0.1) (rust-objc-foundation-0.1, rust-objc-id-0.1, rust-objc-test-utils-0.0) (rust-onig-5.0, rust-onig-sys-69.2, rust-vergen-3.1) [home-page]: Likewise. * gnu/packages/finance.scm (ledger-agent, keepkey-agent) [home-page]: Likewise. * gnu/packages/haskell-check.scm (ghc-tasty-expected-failure) [home-page]: Likewise. * gnu/packages/haskell-web.scm (ghc-bsb-http-chunked, ghc-warp) (ghc-warp-tls)[home-page]: Likewise. * gnu/packages/haskell-xyz.scm (ghc-configurator, ghc-hasktags) (ghc-linear, ghc-newtype-generics, ghc-retry, ghc-xdg-basedir) (ghc-pretty-show)[home-page]: Likewise. * gnu/packages/java.scm (java-javax-inject)[home-page]: Likewise. * gnu/packages/libffi.scm (ruby-ffi)[home-page]: Likewise. * gnu/packages/linux.scm (procenv)[home-page]: Likewise. * gnu/packages/python-web.scm (python-aiodns, python-flask-htpasswd) (python-pycares)[home-page]: Likewise. * gnu/packages/python-xyz.scm (python-progressbar33, python-whatever) (python-funcy)[home-page]: Likewise. * gnu/packages/ruby.scm (ruby-rubyzip, ruby-spinach, ruby-gherkin-ruby) (ruby-code-statistics, ruby-colorize, ruby-wwtd)[home-page]: Likewise.
* gnu: r-activepathways: Update to 1.0.2.Ricardo Wurmus2020-07-16
| | | | | * gnu/packages/bioconductor.scm (r-activepathways): Update to 1.0.2. [propagated-inputs]: Remove r-metap.
* gnu: r-rsubread: Update to 2.2.4.Ricardo Wurmus2020-07-16
| | | | * gnu/packages/bioconductor.scm (r-rsubread): Update to 2.2.4.
* gnu: r-variancepartition: Update to 1.18.2.Ricardo Wurmus2020-07-16
| | | | * gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.18.2.
* gnu: Remove ".git" from "https://github/…/….git".Ludovic Courtès2020-07-12
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Until now, 'lookup-origin' and thus 'lookup-origin-revision' in (guix swh) would sometimes return #f for these because the ".git" URLs are redirects to the non-".git" URLs. Consequently, 'guix lint -c archival' would keep saying "scheduled Software Heritage archival"; likewise, the fallback download code would fail. * gnu/packages/ada.scm, gnu/packages/admin.scm, gnu/packages/aidc.scm, gnu/packages/algebra.scm, gnu/packages/android.scm, gnu/packages/animation.scm, gnu/packages/arcan.scm, gnu/packages/assembly.scm, gnu/packages/audio.scm, gnu/packages/authentication.scm, gnu/packages/avr.scm, gnu/packages/axoloti.scm, gnu/packages/backup.scm, gnu/packages/bash.scm, gnu/packages/benchmark.scm, gnu/packages/bioconductor.scm, gnu/packages/bioinformatics.scm, gnu/packages/bittorrent.scm, gnu/packages/boost.scm, gnu/packages/build-tools.scm, gnu/packages/c.scm, gnu/packages/calendar.scm, gnu/packages/cdrom.scm, gnu/packages/check.scm, gnu/packages/chemistry.scm, gnu/packages/chez.scm, gnu/packages/clojure.scm, gnu/packages/code.scm, gnu/packages/compression.scm, gnu/packages/compton.scm, gnu/packages/coq.scm, gnu/packages/cpp.scm, gnu/packages/cran.scm, gnu/packages/crypto.scm, gnu/packages/curl.scm, gnu/packages/databases.scm, gnu/packages/datastructures.scm, gnu/packages/debug.scm, gnu/packages/disk.scm, gnu/packages/distributed.scm, gnu/packages/django.scm, gnu/packages/dlang.scm, gnu/packages/dns.scm, gnu/packages/docker.scm, gnu/packages/education.scm, gnu/packages/efi.scm, gnu/packages/elixir.scm, gnu/packages/emacs-xyz.scm, gnu/packages/embedded.scm, gnu/packages/emulators.scm, gnu/packages/engineering.scm, gnu/packages/erlang.scm, gnu/packages/fabric-management.scm, gnu/packages/file-systems.scm, gnu/packages/finance.scm, gnu/packages/firmware.scm, gnu/packages/flashing-tools.scm, gnu/packages/fonts.scm, gnu/packages/fontutils.scm, gnu/packages/fpga.scm, gnu/packages/game-development.scm, gnu/packages/games.scm, gnu/packages/genealogy.scm, gnu/packages/genimage.scm, gnu/packages/geo.scm, gnu/packages/gimp.scm, gnu/packages/gl.scm, gnu/packages/gnome-xyz.scm, gnu/packages/gnome.scm, gnu/packages/gnuzilla.scm, gnu/packages/golang.scm, gnu/packages/gpodder.scm, gnu/packages/graph.scm, gnu/packages/graphics.scm, gnu/packages/graphviz.scm, gnu/packages/groff.scm, gnu/packages/groovy.scm, gnu/packages/gtk.scm, gnu/packages/guile-xyz.scm, gnu/packages/guile.scm, gnu/packages/hardware.scm, gnu/packages/haskell-apps.scm, gnu/packages/haskell-xyz.scm, gnu/packages/hexedit.scm, gnu/packages/i2p.scm, gnu/packages/ibus.scm, gnu/packages/image-processing.scm, gnu/packages/image-viewers.scm, gnu/packages/image.scm, gnu/packages/ipfs.scm, gnu/packages/java-graphics.scm, gnu/packages/java-maths.scm, gnu/packages/java.scm, gnu/packages/javascript.scm, gnu/packages/jrnl.scm, gnu/packages/julia.scm, gnu/packages/jupyter.scm, gnu/packages/kodi.scm, gnu/packages/language.scm, gnu/packages/lego.scm, gnu/packages/less.scm, gnu/packages/libusb.scm, gnu/packages/linux.scm, gnu/packages/lirc.scm, gnu/packages/lisp-xyz.scm, gnu/packages/llvm.scm, gnu/packages/logging.scm, gnu/packages/lolcode.scm, gnu/packages/lua.scm, gnu/packages/lxde.scm, gnu/packages/lxqt.scm, gnu/packages/machine-learning.scm, gnu/packages/mail.scm, gnu/packages/markup.scm, gnu/packages/maths.scm, gnu/packages/maven.scm, gnu/packages/mes.scm, gnu/packages/messaging.scm, gnu/packages/monitoring.scm, gnu/packages/mpd.scm, gnu/packages/music.scm, gnu/packages/networking.scm, gnu/packages/node-xyz.scm, gnu/packages/ocaml.scm, gnu/packages/ocr.scm, gnu/packages/onc-rpc.scm, gnu/packages/opencl.scm, gnu/packages/opencog.scm, gnu/packages/pantheon.scm, gnu/packages/password-utils.scm, gnu/packages/patchutils.scm, gnu/packages/pdf.scm, gnu/packages/perl6.scm, gnu/packages/phabricator.scm, gnu/packages/popt.scm, gnu/packages/printers.scm, gnu/packages/prolog.scm, gnu/packages/protobuf.scm, gnu/packages/pulseaudio.scm, gnu/packages/python-crypto.scm, gnu/packages/python-web.scm, gnu/packages/python-xyz.scm, gnu/packages/qt.scm, gnu/packages/radio.scm, gnu/packages/rails.scm, gnu/packages/rdf.scm, gnu/packages/rednotebook.scm, gnu/packages/rpc.scm, gnu/packages/rsync.scm, gnu/packages/ruby.scm, gnu/packages/rust.scm, gnu/packages/scheme.scm, gnu/packages/screen.scm, gnu/packages/security-token.scm, gnu/packages/selinux.scm, gnu/packages/serialization.scm, gnu/packages/shells.scm, gnu/packages/shellutils.scm, gnu/packages/simh.scm, gnu/packages/sml.scm, gnu/packages/ssh.scm, gnu/packages/statistics.scm, gnu/packages/stenography.scm, gnu/packages/sync.scm, gnu/packages/syncthing.scm, gnu/packages/synergy.scm, gnu/packages/telephony.scm, gnu/packages/terminals.scm, gnu/packages/tex.scm, gnu/packages/texinfo.scm, gnu/packages/text-editors.scm, gnu/packages/textutils.scm, gnu/packages/time.scm, gnu/packages/tmux.scm, gnu/packages/tor.scm, gnu/packages/toys.scm, gnu/packages/version-control.scm, gnu/packages/video.scm, gnu/packages/vim.scm, gnu/packages/virtualization.scm, gnu/packages/vlang.scm, gnu/packages/vnc.scm, gnu/packages/vpn.scm, gnu/packages/web-browsers.scm, gnu/packages/web.scm, gnu/packages/wireservice.scm, gnu/packages/wm.scm, gnu/packages/wxwidgets.scm, gnu/packages/xdisorg.scm, gnu/packages/xml.scm, gnu/packages/xorg.scm, tests/lint.scm: Remove trailing ".git" from 'git-reference' URL.
* gnu: r-depecher: Update to 1.4.1.Ricardo Wurmus2020-07-04
| | | | * gnu/packages/bioconductor.scm (r-depecher): Update to 1.4.1.
* gnu: r-rsubread: Update to 2.2.3.Ricardo Wurmus2020-07-04
| | | | * gnu/packages/bioconductor.scm (r-rsubread): Update to 2.2.3.
* gnu: Add r-rgreat.Ricardo Wurmus2020-06-22
| | | | * gnu/packages/bioconductor.scm (r-rgreat): New variable.
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