diff options
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 56219c55a5..e03eb21531 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1192,6 +1192,32 @@ shape. This package provides an @code{htmlwidget} for building streamgraph visualizations.") (license license:expat)))) +(define-public r-wasabi + (let ((commit "8c33cabde8d18c2657cd6e38e7cb834f87cf9846") + (revision "1")) + (package + (name "r-wasabi") + (version (git-version "1.0.1" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/COMBINE-lab/wasabi") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0rpdj6n4cnx8n2zl60dzgl638474sg49dknwi9x3qb4g56dpphfa")))) + (properties `((upstream-name . "wasabi"))) + (build-system r-build-system) + (propagated-inputs (list r-data-table r-rhdf5 r-rjson)) + (home-page "https://github.com/COMBINE-lab/wasabi") + (synopsis "Use Sailfish and Salmon with Sleuth") + (description + "This package converts the output of the Sailfish and Salmon RNA-seq +quantification tools so that it can be used with the Sleuth differential +analysis package.") + (license license:bsd-3)))) + (define-public pbbam (package (name "pbbam") |