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| author | Vinicius Monego <monego@posteo.net> | 2021-03-09 12:51:14 -0300 |
|---|---|---|
| committer | Nicolas Goaziou <mail@nicolasgoaziou.fr> | 2021-03-13 13:56:07 +0100 |
| commit | 0455c19fa56396a460d6f707a39b6da6502b90e8 (patch) | |
| tree | a152503bf60bfb4565f6f56855086c65b2761ae7 /gnu/packages/python-science.scm | |
| parent | 36062f16b6bce9e5178ba4614d1c8e763a96eb64 (diff) | |
| download | guix-patches-0455c19fa56396a460d6f707a39b6da6502b90e8.tar guix-patches-0455c19fa56396a460d6f707a39b6da6502b90e8.tar.gz | |
gnu: python-scikit-image: Enable tests.
* gnu/packages/python-science.scm (python-scikit-image)[arguments]: Add phases
related to tests.
[native-inputs]: Add python-codecov, python-flake8, python-pytest,
python-pytest-cov, python-pytest-localserver, python-wheel.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
Diffstat (limited to 'gnu/packages/python-science.scm')
| -rw-r--r-- | gnu/packages/python-science.scm | 30 |
1 files changed, 27 insertions, 3 deletions
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 409745819b..79ee7c8bb2 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -36,6 +36,8 @@ #:use-module (gnu packages maths) #:use-module (gnu packages perl) #:use-module (gnu packages python) + #:use-module (gnu packages python-build) + #:use-module (gnu packages python-check) #:use-module (gnu packages python-web) #:use-module (gnu packages python-xyz) #:use-module (gnu packages sphinx) @@ -249,9 +251,25 @@ logic, also known as grey logic.") (base32 "0wgisa03smhrphcjnhq7waa5vyyd32b67hblapjbqrqqj751idpv")))) (build-system python-build-system) (arguments - ;; TODO: Some tests require running X11 server. Disable them? - '(#:tests? #f)) + `(#:phases + (modify-phases %standard-phases + (add-before 'build 'change-home-dir + (lambda _ + ;; Change from /homeless-shelter to /tmp for write permission. + (setenv "HOME" "/tmp") + #t)) + (replace 'build + (lambda _ + (invoke "make"))) + (replace 'check + (lambda _ + ;; The following tests require online data. + (invoke "python" "-m" "pytest" "skimage" "--doctest-modules" "-k" + (string-append "not test_ndim" + " and not test_skin"))))))) ;; See requirements/ for the list of build and run time requirements. + ;; NOTE: scikit-image has an optional dependency on python-pooch, however + ;; propagating it would enable many more tests that require online data. (propagated-inputs `(("python-cloudpickle" ,python-cloudpickle) ("python-dask" ,python-dask) @@ -264,7 +282,13 @@ logic, also known as grey logic.") ("python-scipy" ,python-scipy) ("python-tifffile" ,python-tifffile))) (native-inputs - `(("python-cython" ,python-cython))) + `(("python-codecov" ,python-codecov) + ("python-cython" ,python-cython) + ("python-flake8" ,python-flake8) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov) + ("python-pytest-localserver" ,python-pytest-localserver) + ("python-wheel" ,python-wheel))) (home-page "https://scikit-image.org/") (synopsis "Image processing in Python") (description |