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| * gnu: Update python-scikit-learn to 0.22.1.Roel Janssen2020-03-06
| | | | | | | | | | * gnu/packages/machine-learning.scm (python-scikit-learn): Update to 0.22.1; Add python-joblib to native-inputs to run the test suite.
* | Merge branch 'master' into core-updatesMarius Bakke2020-03-04
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| * gnu: libsvm: Use HTTPS home page.Tobias Geerinckx-Rice2020-02-23
| | | | | | | | * gnu/packages/machine-learning.scm (libsvm)[home-page]: Use HTTPS.
* | Merge branch 'staging' into core-updatesMarius Bakke2020-02-03
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| * gnu: ghmm: Fix missing module import.Marius Bakke2020-01-26
| | | | | | | | | | | | This is a follow-up to commit 9c2563a80b6f1d8fb8677f5314e6180ea9916aa5. * gnu/packages/machine-learning.scm (ghmm)[arguments]: Add #:modules.
* | gnu: Replace uses of 'libjpeg' with 'libjpeg-turbo'.Marius Bakke2020-01-22
|/ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/abiword.scm (abiword)[inputs]: Change from LIBJPEG to LIBJPEG-TURBO. * gnu/packages/admin.scm (testdisk)[inputs]: Likewise. * gnu/packages/algebra.scm (giac)[inputs]: Likewise. * gnu/packages/animation.scm (synfig)[inputs]: Likewise. * gnu/packages/astronomy.scm (gnuastro, celestia)[inputs]: Likewise. * gnu/packages/cdrom.scm (dvdstyler)[inputs]: Likewise. * gnu/packages/cran.scm (r-jpeg, r-tiff, r-readbitmap)[inputs]: Likewise. * gnu/packages/cups.scm (cups-filters, hplip)[inputs]: Likewise. * gnu/packages/display-managers.scm (slim)[inputs]: Likewise. * gnu/packages/ebook.scm (fbreader)[inputs]: Likewise. * gnu/packages/emacs.scm (emacs)[inputs]: Likewise. * gnu/packages/enlightenment.scm (efl)[propagated-inputs]: Likewise. * gnu/packages/fltk.scm (fltk, ntk)[inputs]: Likewise. * gnu/packages/fontutils.scm (fontforge)[inputs]: Likewise. * gnu/packages/freedesktop.scm (weston)[inputs]: Likewise. * gnu/packages/game-development.scm (sfml, allegro, aseprite, python-pygame, eureka, ioquake3)[inputs]: Likewise. * gnu/packages/games.scm (adanaxisgpl, freedroidrpg, irrlicht, minetest, fizmo, supertuxkart, gzdoom, xmoto, xonotic)[inputs]: Likewise. * gnu/packages/gd.scm (gd, perl-gd)[inputs]: Likewise. * gnu/packages/ghostscript.scm (lcms)[inputs]: Likewise. (ghostscript)[inputs, native-inputs]: Likewise. * gnu/packages/gimp.scm (gegl, gimp)[inputs]: Likewise. * gnu/packages/gnome.scm (libgnomeui, eog, tracker-miners, gthumb)[inputs]: Likewise. * gnu/packages/gnunet.scm (libextractor)[inputs]: Likewise. * gnu/packages/gnustep.scm (windowmaker)[inputs]: Likewise. * gnu/packages/graphics.scm (blender, blender-2.79, openimageio, openscenegraph, openscenegraph-3.4, povray, fgallery)[inputs]: Likewise. * gnu/packages/graphviz.scm (graphviz)[inputs]: Likewise. * gnu/packages/gstreamer.scm (gst-plugins-good)[inputs]: Likewise. * gnu/packages/gtk.scm (gdk-pixbuf)[inputs]: Likewise. * gnu/packages/image-processing.scm (dcmtk, mia, vtk, opencv, vips, nip2, vxl, insight-toolkit)[inputs]: Likewise. * gnu/packages/image-viewers.scm (gpicview, luminance-hdr)[inputs]: Likewise. * gnu/packages/image.scm (jpegoptim, libtiff, leptonica, imlib2, freeimage, vigra, libwebp, libmng, jasper, steghide, jp2a)[inputs]: Likewise. * gnu/packages/imagemagick.scm (imagemagick, graphicsmagick)[inputs]: Likewise. * gnu/packages/java.scm (icedtea-6, icedtea-7, openjdk9, openjdk11, openjdk12)[inputs]: Likewise. * gnu/packages/kde-frameworks.scm (khtml)[inputs]: Likewise. * gnu/packages/kodi.scm (kodi)[inputs]: Likewise. * gnu/packages/machine-learning.scm (dlib, tensorflow)[inputs]: Likewise. * gnu/packages/mate.scm (atril, eom)[inputs]: Likewise. * gnu/packages/maths.scm (hdf4, hdf-java, hdf-eos2, netcdf)[inputs]: Likewise. * gnu/packages/netpbm.scm (netpbm)[inputs]: Likewise. * gnu/packages/pdf.scm (zathura-pdf-mupdf, podofo, mupdf, fbida)[inputs]: Likewise. * gnu/packages/photo.scm (libraw, libpano13, enblend-enfuse, darktable, hugin, rawtherapee)[inputs]: Likewise. * gnu/packages/prolog.scm (swi-prolog)[native-inputs]: Likewise. * gnu/packages/python-xyz.scm (python-hdf4, python-pillow)[inputs]: Likewise. * gnu/packages/qt.scm (qtbase, qtwebkit)[inputs]: Likewise. * gnu/packages/rdesktop.scm (freerdp)[inputs]: Likewise. * gnu/packages/scanner.scm (sane-backends, xsane)[inputs]: Likewise. * gnu/packages/scheme.scm (racket)[inputs]: Likewise. * gnu/packages/scribus.scm (scribus)[inputs]: Likewise. * gnu/packages/sdl.scm (sdl-image)[propagated-inputs]: Likewise. (guile-sdl)[native-inputs]: Likewise. * gnu/packages/spice.scm (spice-gtk)[inputs]: Likewise. * gnu/packages/statistics.scm (r-with-tests)[inputs]: Likewise. * gnu/packages/tcl.scm (perl-tk)[inputs]: Likewise. * gnu/packages/upnp.scm (readymedia)[inputs]: Likewise. * gnu/packages/video.scm (mplayer, mpv, v4l-utils, motion)[inputs]: Likewise. * gnu/packages/web-browsers.scm (dillo, links)[inputs]: Likewise. * gnu/packages/web.scm (netsurf)[inputs]: Likewise. * gnu/packages/webkit.scm (webkitgtk)[inputs]: Likewise. * gnu/packages/wine.scm (wine)[inputs]: Likewise. * gnu/packages/wv.scm (wv)[inputs]: Likewise. * gnu/packages/wxwidgets.scm (wxwidgets, wxwidgets-2)[inputs]: Likewise. * gnu/packages/xdisorg.scm (xscreensaver)[inputs]: Likewise. * gnu/packages/xfce.scm (tumbler)[inputs]: Likewise. * gnu/packages/xfig.scm (xfig, transfig)[inputs]: Likewise. * gnu/packages/xorg.scm (xpra)[inputs]: Likewise.
* gnu: Add python-umap-learn.Brett Gilio2019-12-23
| | | | * gnu/packages/machine-learning.scm (python-umap-learn): New variable.
* gnu: Really move lisp libraries to lisp-xyz, uglify-js to javascript and ↵Pierre Neidhardt2019-12-05
| | | | | | | | | | | | | | | | | stumpwm to wm. * gnu/local.mk: Include lisp-xyz.scm. * gnu/packages/lisp-xyz.scm: New file. * gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to javascript.scm and stumpwm to wm.scm. * gnu/packages/javascript.scm: Add uglify-js. * gnu/packages/wm.scm: Add stumpwm. * gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm. * gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm. * gnu/packages/web.scm: Find uglify-js in javascript.scm. * gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm. * guix/build-system/minify.scm (default-uglify-js): Find uglify-js in javascript module instead of lisp.
* Revert "gnu: Properly move lisp libraries to lisp-xyz, uglify-js to ↵Tobias Geerinckx-Rice2019-12-05
| | | | | | | javascript and stumpwm to wm." This reverts commit ac1ee30f4f7f9d0ae2a655676b0e8b9eb90a35dd, which still breaks ‘guix pull’.
* gnu: Properly move lisp libraries to lisp-xyz, uglify-js to javascript and ↵Pierre Neidhardt2019-12-05
| | | | | | | | | | | | | | | | | stumpwm to wm. * gnu/local.mk: Include lisp-xyz.scm. * gnu/packages/lisp-xyz.scm: New file. * gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to javascript.scm and stumpwm to wm.scm. * gnu/packages/javascript.scm: Add uglify-js. * gnu/packages/wm.scm: Add stumpwm. * gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm. * gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm. * gnu/packages/web.scm: Find uglify-js in javascript.scm. * gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm. * guix/build-system/minify.scm (default-uglify-js): Find uglify-js in javascript module instead of lisp.
* gnu: python-scipy: Move to (gnu packages python-science).Ricardo Wurmus2019-12-02
| | | | | | | | * gnu/packages/python-xyz.scm (python-scipy, python2-scipy): Move these from here... * gnu/packages/python-science.scm (python-scipy, python2-scipy): ...to here. * gnu/packages/bioinformatics.scm, gnu/packages/machine-learning.scm, gnu/packages/statistics.scm: Adjust module imports.
* Revert "gnu: Move lisp libraries to lisp-xyz, uglify-js to javascript and ↵Ricardo Wurmus2019-11-28
| | | | | | stumpwm to wm." This reverts commit abf43a67d5929bf279edce3e790ef1348dda32a5 as it broke "guix pull".
* gnu: Move lisp libraries to lisp-xyz, uglify-js to javascript and stumpwm to wm.Pierre Neidhardt2019-11-28
| | | | | | | | | | | | | * gnu/local.mk: Include lisp-xyz.scm. * gnu/packages/lisp-xyz.scm: New file. * gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to javascript.scm and stumpwm to wm.scm. * gnu/packages/javascript.scm: Add uglify-js. * gnu/packages/wm.scm: Add stumpwm. * gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm. * gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm. * gnu/packages/web.scm: Find uglify-js in javascript.scm. * gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* gnu: Add gloo.Giacomo Leidi2019-10-21
| | | | | | * gnu/packages/machine-learning.scm (gloo): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: protobuf: Update to 3.10.0.Marius Bakke2019-10-21
| | | | | | | | | | | | * gnu/packages/protobuf.scm (protobuf, python-protobuf): Update to 3.10.0. (protobuf-next, python-protobuf-next): Rename to .... (protobuf-3.6, python-protobuf-3.6): ... this. (protobuf-3.5): New public variable. * gnu/packages/machine-learning.scm (grpc)[native-inputs]: Change from PROTOBUF-NEXT to PROTOBUF. (tensorflow)[native-inputs, propagated-inputs]: Adjust for renamed PROTOBUF-NEXT. * gnu/packages/robotics.scm (aseba)[inputs]: Change from PROTOBUF to PROTOBUF-3.5. * gnu/packages/telephony.scm (mumble)[inputs]: Likewise.
* gnu: gRPC: Update description.Marius Bakke2019-10-12
| | | | * gnu/packages/machine-learning.scm (grpc)[description]: Remove "open source".
* gnu: FANN: Update description.Marius Bakke2019-10-12
| | | | * gnu/packages/machine-learning.scm (fann)[description]: Remove "open source".
* gnu: python-scikit-learn: Update to 0.20.4.Jesse Gibbons2019-10-12
| | | | | | | | Fixes <https://bugs.gnu.org/37705>. * gnu/packages/machine-learning.scm (python-scikit-learn): Update to 0.20.4. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* Merge branch 'master' into core-updatesRicardo Wurmus2019-10-06
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| * gnu: Add cl-random-forest.Guillaume Le Vaillant2019-10-06
| | | | | | | | | | * gnu/packages/machine-learning.scm (sbcl-cl-random-forest, cl-random-forest, ecl-cl-random-forest): New variables.
| * gnu: Add cl-online-learning.Guillaume Le Vaillant2019-10-06
| | | | | | | | | | * gnu/packages/machine-learning.scm (sbcl-cl-online-learning, cl-online-learning, ecl-cl-online-learning): New variables.
| * gnu: Add cl-libsvm-format.Guillaume Le Vaillant2019-10-06
| | | | | | | | | | * gnu/packages/machine-learning.scm (sbcl-cl-libsvm-format, cl-libsvm-format, ecl-cl-libsvm-format): New variables.
* | Merge branch 'master' into core-updatesMarius Bakke2019-08-13
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| * gnu: ghmm: Remove extra build phase.Efraim Flashner2019-08-07
| | | | | | | | | | * gnu/packages/machine-learning.scm (ghmm)[arguments]: Remove unneeded 'autogen phase.
| * gnu: ghmm: Update source file-name field.Efraim Flashner2019-08-07
| | | | | | | | | | * gnu/packages/machine-learning.scm (ghmm)[source]: Change 'file-name field to include '-checkout' string.
| * gnu: python-scikit-learn: Make gzip timestamps writable.Brian Leung2019-08-05
| | | | | | | | | | | | | | * gnu/packages/machine-learning.scm (python-scikit-learn) [arguments]: Add custom phase to make gzip timestamps writable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* | gnu: python-keras: Add upstream patch.Marius Bakke2019-07-19
| | | | | | | | | | | | * gnu/packages/patches/python-keras-integration-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/machine-learning.scm (python-keras)[source](patches): New field.
* | gnu: tensorflow: Provide older setuptools version.Marius Bakke2019-07-19
| | | | | | | | | | | | * gnu/packages/python-xyz.scm (python-setuptools-for-tensorflow): New public variable. * gnu/packages/machine-learning.scm (tensorflow)[native-inputs]: Add it.
* | gnu: gRPC: Re-add custom c-ares variant.Marius Bakke2019-07-15
| | | | | | | | | | | | | | | | Commit e8393ebe46d9ad09aceb152618db490378ba5ded updated c-ares without knowing that cmake-build-system was the most important feature of 'c-ares-next'. * gnu/packages/adns.scm (c-ares/cmake): New hidden package. * gnu/packages/machine-learning.scm (grpc)[inputs]: Change C-ARES to C-ARES/CMAKE.
* | gnu: gst-kaldi-nnet2-online: Adjust for GCC 7.Marius Bakke2019-07-14
| | | | | | | | | | * gnu/packages/machine-learning.scm (gst-kaldi-nnet2-online)[arguments]: Don't read CPLUS_INCLUDE_PATH, or pass -std=c++11. End phases on #t.
* | build-system/python: Export 'python-version'.Ludovic Courtès2019-06-21
| | | | | | | | | | | | | | | | | | | | | | * guix/build/python-build-system.scm (get-python-version): Rename to... (python-version): ... this. Update callers. Make public. * gnu/packages/gstreamer.scm (python-gst)[arguments]: Adjust accordingly. * gnu/packages/machine-learning.scm (ghmm)[arguments]: Likewise. * gnu/packages/openldap.scm (389-ds-base)[arguments]: Import (guix build python-build-system). Use 'python-version'. * gnu/packages/package-management.scm (conda)[arguments]: Use 'python-version'.
* | Merge branch 'staging' into core-updatesMarius Bakke2019-06-20
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| * gnu: Add python-keras.Ricardo Wurmus2019-06-19
| | | | | | | | * gnu/packages/machine-learning.scm (python-keras): New variable.
| * gnu: Add python-keras-preprocessing.Ricardo Wurmus2019-06-19
| | | | | | | | * gnu/packages/machine-learning.scm (python-keras-preprocessing): New variable.
| * gnu: Add python-keras-applications.Ricardo Wurmus2019-06-19
| | | | | | | | * gnu/packages/machine-learning.scm (python-keras-applications): New variable.
| * gnu: Add python-iml.Nicolas Goaziou2019-06-18
| | | | | | | | * gnu/packages/machine-learning.scm (python-iml): New variable.
| * gnu: gemmlowp-for-tensorflow: Use SSE2.Ricardo Wurmus2019-06-18
| | | | | | | | | | * gnu/packages/machine-learning.scm (gemmlowp-for-tensorflow)[arguments]: Only enable SSE2, not SSE4.1 on i686 and x86_64 architectures.
| * gnu: python-scikit-learn: Update to 0.20.3.Ricardo Wurmus2019-06-17
| | | | | | | | * gnu/packages/machine-learning.scm (python-scikit-learn): Update to 0.20.3.
* | Merge branch 'master' into core-updatesLudovic Courtès2019-06-13
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| * gnu: rxcpp: Don't use unstable tarball.Tobias Geerinckx-Rice2019-05-26
| | | | | | | | | | * gnu/packages/machine-learning.scm (rxcpp)[source]: Use GIT-FETCH and GIT-FILE-NAME.
| * gnu: rxcpp: Update to 4.1.0.Tobias Geerinckx-Rice2019-05-26
| | | | | | | | * gnu/packages/machine-learning.scm (rxcpp): Update to 4.1.0.
* | Merge branch 'master' into core-updatesMarius Bakke2019-05-01
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| * gnu: libsvm: Update to 3.23.Tobias Geerinckx-Rice2019-04-25
| | | | | | | | * gnu/packages/machine-learning.scm (libsvm): Update to 3.23.
| * gnu: openfst: Update to 1.7.2.Tobias Geerinckx-Rice2019-04-25
| | | | | | | | * gnu/packages/machine-learning.scm (openfst): Update to 1.7.2.
| * gnu: Add tensorflow.Ricardo Wurmus2019-04-11
| | | | | | | | * gnu/packages/machine-learning.scm (tensorflow): New variable.
| * gnu: ocaml-mcl: Do not use unstable tarball.Ricardo Wurmus2019-04-11
| | | | | | | | * gnu/packages/machine-learning.scm (ocaml-mcl)[source]: Use git-fetch.
| * gnu: ocaml-mcl: Build with latest OCaml.Ricardo Wurmus2019-04-11
| | | | | | | | | | | | * gnu/packages/machine-learning.scm (ocaml-mcl)[arguments]: Remove #:ocaml and #:findlib arguments; patch code in build phase. [native-inputs]: Add ocamlbuild.
| * gnu: Add gemmlowp-for-tensorflow.Ricardo Wurmus2019-04-08
| | | | | | | | * gnu/packages/machine-learning.scm (gemmlowp-for-tensorflow): New variable.
| * gnu: r-kernlab: Move to (gnu packages cran).Ricardo Wurmus2019-03-25
| | | | | | | | | | * gnu/packages/machine-learning.scm (r-kernlab): Move from here... * gnu/packages/cran.scm (r-kernlab): ...to here.
* | Merge branch 'staging' into core-updatesMarius Bakke2019-03-23
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