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* gnu: Add r-lintr.Nicolò Balzarotti2019-12-11
| | | | | | * gnu/packages/cran.scm (r-lintr): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: Add r-cyclocomp.Nicolò Balzarotti2019-12-11
| | | | | | * gnu/packages/cran.scm (r-cyclocomp): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: Add r-xmlparsedata.Nicolò Balzarotti2019-12-11
| | | | | | * gnu/packages/cran.scm (r-xmlparsedata): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: Add r-statcheck.Nicolò Balzarotti2019-12-11
| | | | | | * gnu/packages/cran.scm (r-statcheck): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: r-metap: Update to 1.2.Ricardo Wurmus2019-12-09
| | | | | | * gnu/packages/cran.scm (r-metap): Move this from here... * gnu/packages/bioconductor.scm (r-metap): ...to here and update to 1.2. [propagated-inputs]: Add r-mutoss and r-tfisher.
* gnu: Add r-tfisher.Ricardo Wurmus2019-12-09
| | | | * gnu/packages/cran.scm (r-tfisher): New variable.
* gnu: r-umap: Update to 0.2.4.0.Ricardo Wurmus2019-12-09
| | | | * gnu/packages/cran.scm (r-umap): Update to 0.2.4.0.
* gnu: r-globals: Update to 0.12.5.Ricardo Wurmus2019-12-09
| | | | * gnu/packages/cran.scm (r-globals): Update to 0.12.5.
* gnu: r-renv: Update to 0.9.1.Ricardo Wurmus2019-12-09
| | | | * gnu/packages/cran.scm (r-renv): Update to 0.9.1.
* gnu: r-cli: Update to 2.0.0.Ricardo Wurmus2019-12-09
| | | | | * gnu/packages/cran.scm (r-cli): Update to 2.0.0. [propagated-inputs]: Add r-fansi and r-glue.
* gnu: r-energy: Update to 1.7-7.Ricardo Wurmus2019-12-09
| | | | * gnu/packages/cran.scm (r-energy): Update to 1.7-7.
* gnu: r-callr: Update to 3.4.0.Ricardo Wurmus2019-12-09
| | | | * gnu/packages/cran.scm (r-callr): Update to 3.4.0.
* gnu: r-uwot: Update to 0.1.5.Ricardo Wurmus2019-12-06
| | | | * gnu/packages/cran.scm (r-uwot): Update to 0.1.5.
* gnu: r-irkernel: Update to 1.1.Ricardo Wurmus2019-12-06
| | | | * gnu/packages/cran.scm (r-irkernel): Update to 1.1.
* gnu: r-listenv: Update to 0.8.0.Ricardo Wurmus2019-12-06
| | | | * gnu/packages/cran.scm (r-listenv): Update to 0.8.0.
* gnu: r-spam: Update to 2.5-0.Ricardo Wurmus2019-12-06
| | | | * gnu/packages/cran.scm (r-spam): Update to 2.5-0.
* gnu: r-multicool: Update to 0.1-11.Ricardo Wurmus2019-12-06
| | | | * gnu/packages/cran.scm (r-multicool): Update to 0.1-11.
* gnu: r-factoextra: Update to 1.0.6.Ricardo Wurmus2019-12-06
| | | | * gnu/packages/cran.scm (r-factoextra): Update to 1.0.6.
* gnu: r-renv: Update to 0.9.0.Ricardo Wurmus2019-12-06
| | | | * gnu/packages/cran.scm (r-renv): Update to 0.9.0.
* gnu: r-openxlsx: Update to 4.1.4.Ricardo Wurmus2019-12-06
| | | | | * gnu/packages/cran.scm (r-openxlsx): Update to 4.1.4. [propagated-inputs]: Remove r-rlang.
* gnu: r-heatmaply: Update to 1.0.0.Ricardo Wurmus2019-12-06
| | | | | * gnu/packages/cran.scm (r-heatmaply): Update to 1.0.0. [propagated-inputs]: Add r-egg.
* gnu: Add r-egg.Ricardo Wurmus2019-12-06
| | | | * gnu/packages/cran.scm (r-egg): New variable.
* gnu: r-cubature: Update to 2.0.4.Ricardo Wurmus2019-12-06
| | | | * gnu/packages/cran.scm (r-cubature): Update to 2.0.4.
* gnu: r-geometry: Update to 0.4.5.Ricardo Wurmus2019-12-06
| | | | * gnu/packages/cran.scm (r-geometry): Update to 0.4.5.
* gnu: r-htmltable: Update to 1.13.3.Ricardo Wurmus2019-12-06
| | | | * gnu/packages/cran.scm (r-htmltable): Update to 1.13.3.
* gnu: Really move lisp libraries to lisp-xyz, uglify-js to javascript and ↵Pierre Neidhardt2019-12-05
| | | | | | | | | | | | | | | | | stumpwm to wm. * gnu/local.mk: Include lisp-xyz.scm. * gnu/packages/lisp-xyz.scm: New file. * gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to javascript.scm and stumpwm to wm.scm. * gnu/packages/javascript.scm: Add uglify-js. * gnu/packages/wm.scm: Add stumpwm. * gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm. * gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm. * gnu/packages/web.scm: Find uglify-js in javascript.scm. * gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm. * guix/build-system/minify.scm (default-uglify-js): Find uglify-js in javascript module instead of lisp.
* Revert "gnu: Properly move lisp libraries to lisp-xyz, uglify-js to ↵Tobias Geerinckx-Rice2019-12-05
| | | | | | | javascript and stumpwm to wm." This reverts commit ac1ee30f4f7f9d0ae2a655676b0e8b9eb90a35dd, which still breaks ‘guix pull’.
* gnu: Properly move lisp libraries to lisp-xyz, uglify-js to javascript and ↵Pierre Neidhardt2019-12-05
| | | | | | | | | | | | | | | | | stumpwm to wm. * gnu/local.mk: Include lisp-xyz.scm. * gnu/packages/lisp-xyz.scm: New file. * gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to javascript.scm and stumpwm to wm.scm. * gnu/packages/javascript.scm: Add uglify-js. * gnu/packages/wm.scm: Add stumpwm. * gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm. * gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm. * gnu/packages/web.scm: Find uglify-js in javascript.scm. * gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm. * guix/build-system/minify.scm (default-uglify-js): Find uglify-js in javascript module instead of lisp.
* Merge branch 'staging'Marius Bakke2019-12-04
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| * Merge branch 'master' into stagingMarius Bakke2019-11-28
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| * \ Merge branch 'master' into stagingMarius Bakke2019-11-28
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| * \ \ Merge branch 'master' into stagingMarius Bakke2019-11-15
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| * \ \ \ Merge branch 'master' into stagingMarius Bakke2019-10-30
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| * \ \ \ \ Merge branch 'master' into stagingMarius Bakke2019-10-27
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| * \ \ \ \ \ Merge branch 'master' into stagingMarius Bakke2019-10-23
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| * \ \ \ \ \ \ Merge branch 'master' into stagingMarius Bakke2019-10-21
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| * \ \ \ \ \ \ \ Merge branch 'master' into stagingMarius Bakke2019-10-18
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| * | | | | | | | | gnu: mariadb: Split into out, lib and dev.Julien Lepiller2019-10-12
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/databases.scm (mariadb): Split into out, lib and dev. (perl-dbd-mysql, python-mysqlclient): Adjust dependencies. * gnu/packages/bioinformatics.scm (kentutils): Adjust dependencies. * gnu/packages/cran.scm (r-rmysql): Adjust dependencies. * gnu/packages/emacs-xyz.scm (emacs-emacsql): Adjust dependencies. * gnu/packages/kodi.scm (kodi): Adjust dependencies. * gnu/packages/qt.scm (qt, qtbase): Adjust dependencies. * gnu/packages/ruby.scm (ruby-mysql2): Adjust dependencies.
* | | | | | | | | | gnu: r-rspectra: Update to 0.16-0.Ricardo Wurmus2019-12-03
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/cran.scm (r-rspectra): Update to 0.16-0.
* | | | | | | | | | gnu: r-sjplot: Update to 2.8.1.Ricardo Wurmus2019-12-03
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/cran.scm (r-sjplot): Update to 2.8.1.
* | | | | | | | | | gnu: r-bayesplot: Update to 1.7.1.Ricardo Wurmus2019-12-03
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/cran.scm (r-bayesplot): Update to 1.7.1.
* | | | | | | | | | gnu: r-maptools: Update to 0.9-9.Ricardo Wurmus2019-12-03
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/cran.scm (r-maptools): Update to 0.9-9.
* | | | | | | | | | gnu: r-network: Update to 1.16.0.Ricardo Wurmus2019-12-03
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/cran.scm (r-network): Update to 1.16.0.
* | | | | | | | | | gnu: r-dendextend: Update to 1.13.2.Ricardo Wurmus2019-12-03
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/cran.scm (r-dendextend): Update to 1.13.2.
* | | | | | | | | | gnu: r-curl: Update to 4.3.Ricardo Wurmus2019-12-03
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/cran.scm (r-curl): Update to 4.3.
* | | | | | | | | | gnu: r-rvcheck: Update to 0.1.7.Ricardo Wurmus2019-12-01
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/cran.scm (r-rvcheck): Update to 0.1.7.
* | | | | | | | | | gnu: r-insight: Update to 0.7.1.Ricardo Wurmus2019-12-01
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/cran.scm (r-insight): Update to 0.7.1.
* | | | | | | | | | gnu: r-algdesign: Update to 1.2.0.Ricardo Wurmus2019-12-01
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/cran.scm (r-algdesign): Update to 1.2.0.
* | | | | | | | | | gnu: r-sdmtools: Update to 1.1-221.2.Ricardo Wurmus2019-12-01
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/cran.scm (r-sdmtools): Update to 1.1-221.2.
* | | | | | | | | | gnu: r-vioplot: Update to 0.3.4.Ricardo Wurmus2019-12-01
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/cran.scm (r-vioplot): Update to 0.3.4.
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