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* gnu: r-ensembldb: Update to 2.12.1.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.12.1. [native-inputs]: Add r-knitr.
* gnu: r-dirichletmultinomial: Update to 1.30.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-dirichletmultinomial): Update to 1.30.0.
* gnu: r-complexheatmap: Update to 2.4.2.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-complexheatmap): Update to 2.4.2. [native-inputs]: Add r-knitr.
* gnu: r-genomicfiles: Update to 1.24.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-genomicfiles): Update to 1.24.0.
* gnu: r-gage: Update to 2.37.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-gage): Update to 2.37.0.
* gnu: r-keggrest: Update to 1.28.0.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.28.0. [native-inputs]: Add r-knitr.
* gnu: r-fastseg: Update to 1.34.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-fastseg): Update to 1.34.0.
* gnu: r-annotationhub: Update to 2.20.0.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.20.0. [native-inputs]: Add r-knitr.
* gnu: r-interactivedisplaybase: Update to 1.26.3.Ricardo Wurmus2020-06-13
| | | | | | | * gnu/packages/bioinformatics.scm (r-interactivedisplaybase): Update to 1.26.3. [propagated-inputs]: Add r-dt. [native-inputs]: Add r-knitr.
* gnu: r-edaseq: Update to 2.22.0.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-edaseq): Update to 2.22.0. [native-inputs]: Add r-knitr.
* gnu: r-deseq: Update to 1.39.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-deseq): Update to 1.39.0.
* gnu: r-aroma-light: Update to 3.18.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-aroma-light): Update to 3.18.0.
* gnu: r-msnid: Update to 1.22.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-msnid): Update to 1.22.0.
* gnu: r-msnbase: Update to 2.14.2.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.14.2. [native-inputs]: Add r-knitr.
* gnu: r-pcamethods: Update to 1.80.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-pcamethods): Update to 1.80.0.
* gnu: r-mzid: Update to 1.26.0.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-mzid): Update to 1.26.0. [native-inputs]: Add r-knitr.
* gnu: r-vsn: Update to 3.56.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-vsn): Update to 3.56.0.
* gnu: r-affy: Update to 1.66.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-affy): Update to 1.66.0.
* gnu: r-affyio: Update to 1.58.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-affyio): Update to 1.58.0.
* gnu: r-protgenerics: Update to 1.20.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-protgenerics): Update to 1.20.0.
* gnu: r-sva: Update to 3.36.0.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-sva): Update to 3.36.0. [propagated-inputs]: Add r-edger.
* gnu: r-methylkit: Update to 1.14.2.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.14.2.
* gnu: r-copywriter: Update to 2.20.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.20.0.
* gnu: r-chipseq: Update to 1.38.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-chipseq): Update to 1.38.0.
* gnu: r-annotationfilter: Update to 1.12.0.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-annotationfilter): Update to 1.12.0. [native-inputs]: Add r-knitr.
* gnu: r-rhdf5: Update to 2.32.0.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.32.0. [native-inputs]: Add r-knitr.
* gnu: r-tximport: Update to 1.16.1.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-tximport): Update to 1.16.1.
* gnu: r-mutationalpatterns: Update to 2.0.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 2.0.0.
* gnu: r-rcas: Update to 1.14.0.Ricardo Wurmus2020-06-13
| | | | | | | | * gnu/packages/bioinformatics.scm (r-rcas): Update to 1.14.0. [propagated-inputs]: Remove r-annotationdbi, r-biomart, r-dbi, r-knitr, r-motifrg, r-org-hs-eg-db, and r-topgo; add r-bsgenome, r-gprofiler2, r-iranges, and r-ranger. [native-inputs]: Add r-knitr.
* gnu: r-bamsignals: Update to 1.20.0.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.20.0. [native-inputs]: Add r-knitr.
* gnu: r-rhtslib: Update to 1.20.0.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.20.0. [native-inputs]: Add r-knitr.
* gnu: r-zlibbioc: Update to 1.34.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-zlibbioc): Update to 1.34.0.
* gnu: r-motifrg: Update to 1.31.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-motifrg): Update to 1.31.0.
* gnu: r-seqlogo: Update to 1.54.3.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-seqlogo): Update to 1.54.3.
* gnu: r-genomation: Update to 1.20.0.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-genomation): Update to 1.20.0. [native-inputs]: Add r-knitr.
* gnu: r-seqpattern: Update to 1.20.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-seqpattern): Update to 1.20.0.
* gnu: r-impute: Update to 1.62.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-impute): Update to 1.62.0.
* gnu: r-bsgenome: Update to 1.56.0.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-bsgenome): Update to 1.56.0. [propagated-inputs]: Add r-matrixstats.
* gnu: r-topgo: Update to 2.40.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-topgo): Update to 2.40.0.
* gnu: r-genomicfeatures: Update to 1.40.0.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.40.0. [native-inputs]: Add r-knitr.
* gnu: r-rtracklayer: Update to 1.48.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.48.0.
* gnu: r-genomicalignments: Update to 1.24.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.24.0.
* gnu: r-summarizedexperiment: Update to 1.18.1.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.18.1. [native-inputs]: Add r-knitr.
* gnu: r-delayedarray: Update to 0.14.0.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.14.0. [propagated-inputs]: Remove r-biocparallel.
* gnu: r-rsamtools: Update to 2.4.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-rsamtools): Update to 2.4.0.
* gnu: r-biostrings: Update to 2.56.0.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm ( r-biostrings): Update to 2.56.0. [propagated-inputs]: Add r-crayon.
* gnu: r-biocparallel: Update to 1.22.0.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.22.0. [native-inputs]: Add r-knitr.
* gnu: r-biomart: Update to 2.44.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-biomart): Update to 2.44.0.
* gnu: r-annotationdbi: Update to 1.50.0.Ricardo Wurmus2020-06-13
| | | | | * gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.50.0. [native-inputs]: Add r-knitr.
* gnu: r-biobase: Update to 2.48.0.Ricardo Wurmus2020-06-13
| | | | * gnu/packages/bioinformatics.scm (r-biobase): Update to 2.48.0.
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