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-rw-r--r--gnu/packages/bioconductor.scm24
1 files changed, 24 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 2d7663715a..9ecf42e783 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -3998,6 +3998,30 @@ database (e.g. JASPAR). It can also be used to visualize motifs, motif
distributions, modules and filter motifs.")
(license license:gpl2)))
+(define-public r-motifdb
+ (package
+ (name "r-motifdb")
+ (version "1.28.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "MotifDb" version))
+ (sha256
+ (base32 "0m5apkjlvdq9yhjdyds3hivfnkbm6f059hy2bkjhalrlhd2si2jc"))))
+ (properties `((upstream-name . "MotifDb")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-biocgenerics" ,r-biocgenerics)
+ ("r-biostrings" ,r-biostrings)
+ ("r-iranges" ,r-iranges)
+ ("r-rtracklayer" ,r-rtracklayer)
+ ("r-s4vectors" ,r-s4vectors)
+ ("r-splitstackshape" ,r-splitstackshape)))
+ (home-page "https://www.bioconductor.org/packages/MotifDb/")
+ (synopsis "Annotated collection of protein-DNA binding sequence motifs")
+ (description "This package provides more than 2000 annotated position
+frequency matrices from nine public sources, for multiple organisms.")
+ (license license:artistic2.0)))
+
(define-public r-motifstack
(package
(name "r-motifstack")