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| author | Ricardo Wurmus <rekado@elephly.net> | 2021-12-04 18:39:35 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2021-12-04 19:54:27 +0100 |
| commit | f33e490334de6347c4069d532474cf76229a242b (patch) | |
| tree | 7f65a0d5b304b28524adfa884261ca8ab83a6ad0 /gnu | |
| parent | 8a446f5e41083c8a7c999fbbd21cc01c2ce1503f (diff) | |
| download | guix-patches-f33e490334de6347c4069d532474cf76229a242b.tar guix-patches-f33e490334de6347c4069d532474cf76229a242b.tar.gz | |
gnu: preseq: Remove references to %outputs and %build-inputs.
* gnu/packages/bioinformatics.scm (preseq)[arguments]: Replace references to
%outputs and %build-inputs by using a gexp.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 19 |
1 files changed, 9 insertions, 10 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index adc5ca572d..cb2fb05633 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -6883,16 +6883,15 @@ structures, classes for genomic regions, mapped sequencing reads, etc.") (modify-phases %standard-phases (delete 'configure)) #:make-flags - (list (string-append "PREFIX=" - (assoc-ref %outputs "out")) - (string-append "LIBBAM=" - (assoc-ref %build-inputs "samtools") - "/lib/libbam.a") - (string-append "SMITHLAB_CPP=" - (assoc-ref %build-inputs "smithlab-cpp") - "/lib") - "PROGS=preseq" - "INCLUDEDIRS=$(SMITHLAB_CPP)/../include/smithlab-cpp $(SAMTOOLS_DIR)"))) + ,#~(list (string-append "PREFIX=" #$output) + (string-append "LIBBAM=" + #$(this-package-input "samtools") + "/lib/libbam.a") + (string-append "SMITHLAB_CPP=" + #$(this-package-input "smithlab-cpp") + "/lib") + "PROGS=preseq" + "INCLUDEDIRS=$(SMITHLAB_CPP)/../include/smithlab-cpp $(SAMTOOLS_DIR)"))) (inputs `(("gsl" ,gsl) ("samtools" ,samtools-0.1) |