From f33e490334de6347c4069d532474cf76229a242b Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Sat, 4 Dec 2021 18:39:35 +0100 Subject: gnu: preseq: Remove references to %outputs and %build-inputs. * gnu/packages/bioinformatics.scm (preseq)[arguments]: Replace references to %outputs and %build-inputs by using a gexp. --- gnu/packages/bioinformatics.scm | 19 +++++++++---------- 1 file changed, 9 insertions(+), 10 deletions(-) (limited to 'gnu') diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index adc5ca572d..cb2fb05633 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -6883,16 +6883,15 @@ structures, classes for genomic regions, mapped sequencing reads, etc.") (modify-phases %standard-phases (delete 'configure)) #:make-flags - (list (string-append "PREFIX=" - (assoc-ref %outputs "out")) - (string-append "LIBBAM=" - (assoc-ref %build-inputs "samtools") - "/lib/libbam.a") - (string-append "SMITHLAB_CPP=" - (assoc-ref %build-inputs "smithlab-cpp") - "/lib") - "PROGS=preseq" - "INCLUDEDIRS=$(SMITHLAB_CPP)/../include/smithlab-cpp $(SAMTOOLS_DIR)"))) + ,#~(list (string-append "PREFIX=" #$output) + (string-append "LIBBAM=" + #$(this-package-input "samtools") + "/lib/libbam.a") + (string-append "SMITHLAB_CPP=" + #$(this-package-input "smithlab-cpp") + "/lib") + "PROGS=preseq" + "INCLUDEDIRS=$(SMITHLAB_CPP)/../include/smithlab-cpp $(SAMTOOLS_DIR)"))) (inputs `(("gsl" ,gsl) ("samtools" ,samtools-0.1) -- cgit v1.2.3