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authorRicardo Wurmus <rekado@elephly.net>2020-12-17 11:36:26 +0100
committerRicardo Wurmus <rekado@elephly.net>2020-12-17 11:36:26 +0100
commit17d95689b4d152a53fbb88c49b8693f967cff881 (patch)
treea8b399eefce54bdea14b34852f7cbeaa3d59a4f7 /gnu/packages
parent04a05946625fc732afc7720eb3fd477901c89953 (diff)
downloadguix-patches-17d95689b4d152a53fbb88c49b8693f967cff881.tar
guix-patches-17d95689b4d152a53fbb88c49b8693f967cff881.tar.gz
gnu: r-coverageview: Move from "experiment" to "package" section.
* gnu/packages/bioconductor.scm (r-coverageview): Move variable.
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/bioconductor.scm54
1 files changed, 27 insertions, 27 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 41cbcf68e4..c84bdfd681 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1156,33 +1156,6 @@ mouse, rat and budding yeast. Mapping data between common gene IDs for budding
yeast are also included.")
(license license:gpl2+)))
-(define-public r-coverageview
- (package
- (name "r-coverageview")
- (version "1.28.0")
- (source (origin
- (method url-fetch)
- (uri (bioconductor-uri "CoverageView" version))
- (sha256
- (base32
- "1k89gzqhd8ca8s9gk5bfzringnc5nayqbwzwwy35fls1cg96qmsj"))))
- (build-system r-build-system)
- (propagated-inputs
- `(("r-s4vectors" ,r-s4vectors)
- ("r-iranges" ,r-iranges)
- ("r-genomicranges" ,r-genomicranges)
- ("r-genomicalignments" ,r-genomicalignments)
- ("r-rtracklayer" ,r-rtracklayer)
- ("r-rsamtools" ,r-rsamtools)))
- (home-page "https://bioconductor.org/packages/CoverageView/")
- (synopsis "Coverage visualization package for R")
- (description "This package provides a framework for the visualization of
-genome coverage profiles. It can be used for ChIP-seq experiments, but it can
-be also used for genome-wide nucleosome positioning experiments or other
-experiment types where it is important to have a framework in order to inspect
-how the coverage distributed across the genome.")
- (license license:artistic2.0)))
-
(define-public r-cummerbund
(package
(name "r-cummerbund")
@@ -1289,6 +1262,33 @@ of Bioconductor.")
packages.")
(license license:artistic2.0)))
+(define-public r-coverageview
+ (package
+ (name "r-coverageview")
+ (version "1.28.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "CoverageView" version))
+ (sha256
+ (base32
+ "1k89gzqhd8ca8s9gk5bfzringnc5nayqbwzwwy35fls1cg96qmsj"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-s4vectors" ,r-s4vectors)
+ ("r-iranges" ,r-iranges)
+ ("r-genomicranges" ,r-genomicranges)
+ ("r-genomicalignments" ,r-genomicalignments)
+ ("r-rtracklayer" ,r-rtracklayer)
+ ("r-rsamtools" ,r-rsamtools)))
+ (home-page "https://bioconductor.org/packages/CoverageView/")
+ (synopsis "Coverage visualization package for R")
+ (description "This package provides a framework for the visualization of
+genome coverage profiles. It can be used for ChIP-seq experiments, but it can
+be also used for genome-wide nucleosome positioning experiments or other
+experiment types where it is important to have a framework in order to inspect
+how the coverage distributed across the genome.")
+ (license license:artistic2.0)))
+
(define-public r-affycomp
(package
(name "r-affycomp")