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| author | Ricardo Wurmus <rekado@elephly.net> | 2018-11-07 22:34:41 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2018-11-07 23:17:35 +0100 |
| commit | 63f3255e13be8d1352031c78a37131c2c6644bdb (patch) | |
| tree | c648985d2db96cfa63aecb91a0a80501dc8c931c /gnu/packages | |
| parent | 019fcdf20af9de5860d7005fe5fb7adef222ce59 (diff) | |
| download | guix-patches-63f3255e13be8d1352031c78a37131c2c6644bdb.tar guix-patches-63f3255e13be8d1352031c78a37131c2c6644bdb.tar.gz | |
gnu: seqtk: Update to 1.3.
* gnu/packages/bioinformatics.scm (seqtk): Update to 1.3.
[source]: Remove outdated snippet.
[arguments]: Use INVOKE and return #T unconditionally.
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 17 |
1 files changed, 5 insertions, 12 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index b98be8eb51..670bea5cd4 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -5868,7 +5868,7 @@ is one that takes arguments.") (define-public seqtk (package (name "seqtk") - (version "1.2") + (version "1.3") (source (origin (method git-fetch) (uri (git-reference @@ -5877,15 +5877,7 @@ is one that takes arguments.") (file-name (git-file-name name version)) (sha256 (base32 - "1mdkgmzdy734a0na9hxbl4k41jjkm87bvjbm7bdbh50fsra86f93")) - (modules '((guix build utils))) - (snippet - '(begin - ;; Remove extraneous header files, as is done in the seqtk - ;; master branch. - (for-each (lambda (file) (delete-file file)) - (list "ksort.h" "kstring.h" "kvec.h")) - #t)))) + "1bfzlqa84b5s1qi22blmmw2s8xdyp9h9ydcq22pfjhh5gab3yz6l")))) (build-system gnu-build-system) (arguments `(#:phases @@ -5893,11 +5885,12 @@ is one that takes arguments.") (delete 'configure) (replace 'check ;; There are no tests, so we just run a sanity check. - (lambda _ (zero? (system* "./seqtk" "seq")))) + (lambda _ (invoke "./seqtk" "seq") #t)) (replace 'install (lambda* (#:key outputs #:allow-other-keys) (let ((bin (string-append (assoc-ref outputs "out") "/bin/"))) - (install-file "seqtk" bin))))))) + (install-file "seqtk" bin) + #t)))))) (inputs `(("zlib" ,zlib))) (home-page "https://github.com/lh3/seqtk") |