From 63f3255e13be8d1352031c78a37131c2c6644bdb Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Wed, 7 Nov 2018 22:34:41 +0100 Subject: gnu: seqtk: Update to 1.3. * gnu/packages/bioinformatics.scm (seqtk): Update to 1.3. [source]: Remove outdated snippet. [arguments]: Use INVOKE and return #T unconditionally. --- gnu/packages/bioinformatics.scm | 17 +++++------------ 1 file changed, 5 insertions(+), 12 deletions(-) (limited to 'gnu/packages') diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index b98be8eb51..670bea5cd4 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -5868,7 +5868,7 @@ is one that takes arguments.") (define-public seqtk (package (name "seqtk") - (version "1.2") + (version "1.3") (source (origin (method git-fetch) (uri (git-reference @@ -5877,15 +5877,7 @@ is one that takes arguments.") (file-name (git-file-name name version)) (sha256 (base32 - "1mdkgmzdy734a0na9hxbl4k41jjkm87bvjbm7bdbh50fsra86f93")) - (modules '((guix build utils))) - (snippet - '(begin - ;; Remove extraneous header files, as is done in the seqtk - ;; master branch. - (for-each (lambda (file) (delete-file file)) - (list "ksort.h" "kstring.h" "kvec.h")) - #t)))) + "1bfzlqa84b5s1qi22blmmw2s8xdyp9h9ydcq22pfjhh5gab3yz6l")))) (build-system gnu-build-system) (arguments `(#:phases @@ -5893,11 +5885,12 @@ is one that takes arguments.") (delete 'configure) (replace 'check ;; There are no tests, so we just run a sanity check. - (lambda _ (zero? (system* "./seqtk" "seq")))) + (lambda _ (invoke "./seqtk" "seq") #t)) (replace 'install (lambda* (#:key outputs #:allow-other-keys) (let ((bin (string-append (assoc-ref outputs "out") "/bin/"))) - (install-file "seqtk" bin))))))) + (install-file "seqtk" bin) + #t)))))) (inputs `(("zlib" ,zlib))) (home-page "https://github.com/lh3/seqtk") -- cgit v1.2.3