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| author | Maxim Cournoyer <maxim.cournoyer@gmail.com> | 2022-05-13 11:47:19 -0400 |
|---|---|---|
| committer | Maxim Cournoyer <maxim.cournoyer@gmail.com> | 2022-05-31 14:54:07 -0400 |
| commit | 54ef40a1f79d6d636ba26ac47f6dd0b84172dd0d (patch) | |
| tree | 33829e6f0a5069b6c78b22c5f5dd78479c4ae04f /gnu/packages/image-processing.scm | |
| parent | 672eab90bbeb16e51322505739b14de6a8f1fa6d (diff) | |
| download | guix-patches-54ef40a1f79d6d636ba26ac47f6dd0b84172dd0d.tar guix-patches-54ef40a1f79d6d636ba26ac47f6dd0b84172dd0d.tar.gz | |
gnu: mia: Update to 2.4.7.
* gnu/packages/patches/mia-fix-boost-headers.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/image-processing.scm (mia): Update to 2.4.7.
[source]: Apply patch.
[configure-flags]: Use the more conventional OFF option value (instead of 0).
[inputs]: Use new style. Replace python2-lxml by python-lxml. Replace vtk by
vtk-7.
[native-inputs]: Use new style. Replace python-2 with python-wrapper.
Diffstat (limited to 'gnu/packages/image-processing.scm')
| -rw-r--r-- | gnu/packages/image-processing.scm | 56 |
1 files changed, 30 insertions, 26 deletions
diff --git a/gnu/packages/image-processing.scm b/gnu/packages/image-processing.scm index e725fe04f7..f4bf1724b4 100644 --- a/gnu/packages/image-processing.scm +++ b/gnu/packages/image-processing.scm @@ -185,7 +185,7 @@ licences similar to the Modified BSD licence.")))) (define-public mia (package (name "mia") - (version "2.4.6") + (version "2.4.7") (source (origin (method url-fetch) (uri (string-append "mirror://sourceforge/mia/mia/" @@ -193,37 +193,41 @@ licences similar to the Modified BSD licence.")))) "/mia-" version ".tar.xz")) (sha256 (base32 - "0j4nd5z7i3v199jh7hqqhwd4g7snchizkc7rhzanpvngqg91m1pb")))) + "0qpcd3n26q52dpyibm11f5l6cgscdr54p2jish39gc3p1f5h3ws1")) + (patches (search-patches "mia-fix-boost-headers.patch")))) (build-system cmake-build-system) (arguments `(#:configure-flags - (list "-DMIA_CREATE_NIPYPE_INTERFACES=0" + (list "-DMIA_CREATE_NIPYPE_INTERFACES=OFF" "-DCMAKE_CXX_FLAGS=-fpermissive"))) (inputs - `(("boost" ,boost) - ("dcmtk" ,dcmtk) - ("doxygen" ,doxygen) - ("eigen" ,eigen) - ("fftw" ,fftw) - ("fftwf" ,fftwf) - ("gsl" ,gsl) - ("gts" ,gts) - ("hdf5" ,hdf5) - ("itpp" ,itpp) - ("libjpeg" ,libjpeg-turbo) - ("libpng" ,libpng) - ("libtiff" ,libtiff) - ("libxml" ,libxml2) - ("libxml++" ,libxml++) - ("maxflow" ,maxflow) - ("niftilib" ,niftilib) - ("nlopt" ,nlopt) - ("openexr" ,openexr-2) - ("python-lxml" ,python2-lxml) - ("vtk" ,vtk))) + (list boost + dcmtk + doxygen + eigen + fftw + fftwf + gsl + gts + hdf5 + itpp + libjpeg-turbo + libpng + libtiff + libxml2 + libxml++ + maxflow + niftilib + nlopt + openexr-2 + python-lxml + ;; The build fails when using the regular VTK (currently at version + ;; 9), with error "addons/vtk/vtkvf.cc:23:10: fatal error: + ;; vtkStructuredPointsReader.h: No such file or directory". + vtk-7)) (native-inputs - `(("pkg-config" ,pkg-config) - ("python" ,python-2))) + (list pkg-config + python-wrapper)) (home-page "http://mia.sourceforge.net") (synopsis "Toolkit for gray scale medical image analysis") (description "MIA provides a combination of command line tools, plug-ins, |