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authorRicardo Wurmus <rekado@elephly.net>2021-03-15 12:15:18 +0100
committerRicardo Wurmus <rekado@elephly.net>2021-03-15 12:15:18 +0100
commit3eeb7dbf04b5ee3120b3ebcf264d54a56ad934e2 (patch)
tree9bfac3b6f4cf51a8d1f4834aee653d0514bd4d9e /gnu/packages/cran.scm
parent1daedaa8646696783c88553e03035d547fd001ca (diff)
downloadguix-patches-3eeb7dbf04b5ee3120b3ebcf264d54a56ad934e2.tar
guix-patches-3eeb7dbf04b5ee3120b3ebcf264d54a56ad934e2.tar.gz
gnu: r-gkmsvm: Move back to (gnu packages cran).
* gnu/packages/bioconductor.scm (r-gkmsvm): Move this variable from here... * gnu/packages/cran.scm (r-gkmsvm): ...to here.
Diffstat (limited to 'gnu/packages/cran.scm')
-rw-r--r--gnu/packages/cran.scm26
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 5854ff6031..30c346d0c1 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -16471,6 +16471,32 @@ visualizations and provides the same flexible approach to building up plots
layer by layer.")
(license license:gpl3)))
+(define-public r-gkmsvm
+ (package
+ (name "r-gkmsvm")
+ (version "0.81.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "gkmSVM" version))
+ (sha256
+ (base32
+ "119g5rhc7ffyviz04r04aj5z1g6abnj3ddd01g7db505sdr6lapj"))))
+ (properties `((upstream-name . "gkmSVM")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-kernlab" ,r-kernlab)
+ ("r-rcpp" ,r-rcpp)
+ ("r-rocr" ,r-rocr)
+ ("r-seqinr" ,r-seqinr)))
+ (home-page "https://cran.r-project.org/web/packages/gkmSVM")
+ (synopsis "Gapped-kmer support vector machine")
+ (description
+ "This R package provides tools for training gapped-kmer SVM classifiers
+for DNA and protein sequences. This package supports several sequence
+kernels, including: gkmSVM, kmer-SVM, mismatch kernel and wildcard kernel.")
+ (license license:gpl2+)))
+
(define-public r-varselrf
(package
(name "r-varselrf")