summaryrefslogtreecommitdiff
path: root/gnu/packages/bioinformatics.scm
diff options
context:
space:
mode:
authorMarius Bakke <mbakke@fastmail.com>2020-03-13 00:18:57 +0100
committerMarius Bakke <mbakke@fastmail.com>2020-03-13 00:18:57 +0100
commitaaadd6e2e1bb4f814dfc7b30d8d23b91526c4deb (patch)
tree282560d8960168b33530cb71977ae57cc0a91450 /gnu/packages/bioinformatics.scm
parent6b5a2e58866dc3642a39bb14aea9a77c4019b806 (diff)
downloadguix-patches-aaadd6e2e1bb4f814dfc7b30d8d23b91526c4deb.tar
guix-patches-aaadd6e2e1bb4f814dfc7b30d8d23b91526c4deb.tar.gz
gnu: salmon: Adjust for C_INCLUDE_PATH changes.
* gnu/packages/bioinformatics.scm (salmon)[arguments]: Append Eigen headers to C_INCLUDE_PATH instead of CPATH.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm4
1 files changed, 2 insertions, 2 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 035a7bb808..5b9413f181 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -11970,8 +11970,8 @@ The following file formats are supported:
(("lib/libdivsufsort.a") "/lib/libdivsufsort.so"))
;; Ensure that all headers can be found
- (setenv "CPATH"
- (string-append (getenv "CPATH")
+ (setenv "CPLUS_INCLUDE_PATH"
+ (string-append (or (getenv "CPLUS_INCLUDE_PATH") "")
":"
(assoc-ref inputs "eigen")
"/include/eigen3"))