diff options
| author | zimoun <zimon.toutoune@gmail.com> | 2020-10-30 16:01:26 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-12-09 12:12:48 +0100 |
| commit | 6a4818716d16613d56f0a4c7c8745ae75da8edb6 (patch) | |
| tree | 9ab96c7a34a60ae6deaacba7d41a55620e32fcad /gnu/packages/bioinformatics.scm | |
| parent | 64f9fb308f776fbc5e8b3fe39f06bc34fec01c2a (diff) | |
| download | guix-patches-6a4818716d16613d56f0a4c7c8745ae75da8edb6.tar guix-patches-6a4818716d16613d56f0a4c7c8745ae75da8edb6.tar.gz | |
gnu: r-gqtlbase: Update to 1.21.1.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
* gnu/packages/bioinformatics.scm (r-gqtlbase): Update to 1.21.1.
[arguments]: Add phase to patch broken NAMESPACE file.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 14 |
1 files changed, 12 insertions, 2 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 42ebbe7cbc..c758724552 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -10563,16 +10563,26 @@ interval to data view, mismatch pileup, and several splicing summaries.") (define-public r-gqtlbase (package (name "r-gqtlbase") - (version "1.20.4") + (version "1.21.1") (source (origin (method url-fetch) (uri (bioconductor-uri "gQTLBase" version)) (sha256 (base32 - "1ly14vhhqxjpbxjypi6ppd37dycabdhf4ny4nsvp9969k418zv41")))) + "0nipibm1bk9k70ajbw1f6vjmz0dh7gk21l17q3m54bnawxsggrfh")))) (properties `((upstream-name . "gQTLBase"))) (build-system r-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + ;; This is an upstream bug. + (add-after 'unpack 'fix-imports + (lambda _ + (substitute* "NAMESPACE" + ((".*maxffmode.*") "") + (("importFrom\\(ff,.*") "import(ff)\n")) + #t))))) (propagated-inputs `(("r-batchjobs" ,r-batchjobs) ("r-bbmisc" ,r-bbmisc) |