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| author | Efraim Flashner <efraim@flashner.co.il> | 2020-12-07 12:24:17 +0200 |
|---|---|---|
| committer | Efraim Flashner <efraim@flashner.co.il> | 2020-12-07 12:48:07 +0200 |
| commit | 3832704aff7444e26ba7f6915bdb4f718b1bf2f4 (patch) | |
| tree | ecc3d654ad23371c540486c5b1d3d12818dd1d21 /gnu/packages/bioinformatics.scm | |
| parent | f48cd014f3986de119b746d9181a19ed056a3d37 (diff) | |
| download | guix-patches-3832704aff7444e26ba7f6915bdb4f718b1bf2f4.tar guix-patches-3832704aff7444e26ba7f6915bdb4f718b1bf2f4.tar.gz | |
gnu: minimap2: Fix build on aarch64-linux.
* gnu/packages/bioinformatics.scm (minimap2)[arguments]: Adjust
configure-flags to be better per-architecture.
[source]: Add patch.
* gnu/packages/patches/minimap2-aarch64-support.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 19 |
1 files changed, 12 insertions, 7 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 312eb966e7..5efcfdea11 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -13056,7 +13056,8 @@ version does count multisplits.") "minimap2-" version ".tar.bz2")) (sha256 (base32 - "0hi7i9pzxhvjj44khzzzj1lrn5gb5837arr4wgln7k1k5n4ci2mn")))) + "0hi7i9pzxhvjj44khzzzj1lrn5gb5837arr4wgln7k1k5n4ci2mn")) + (patches (search-patches "minimap2-aarch64-support.patch")))) (build-system gnu-build-system) (arguments `(#:tests? #f ; there are none @@ -13065,12 +13066,16 @@ version does count multisplits.") (let ((system ,(or (%current-target-system) (%current-system)))) (cond - ((string-prefix? "x86_64" system) - "all") - ((or (string-prefix? "armhf" system) - (string-prefix? "aarch64" system)) - "arm_neon=1") - (else "sse2only=1")))) + ((string-prefix? "x86_64" system) + "all") + ((or (string-prefix? "i586" system) + (string-prefix? "i686" system)) + "sse2only=1") + ((string-prefix? "armhf" system) + "arm_neon=1") + ((string-prefix? "aarch64" system) + "aarch64=1") + (else "")))) #:phases (modify-phases %standard-phases (delete 'configure) |