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| author | Arun Isaac <arunisaac@systemreboot.net> | 2021-04-14 13:18:01 +0530 |
|---|---|---|
| committer | Arun Isaac <arunisaac@systemreboot.net> | 2021-04-14 22:39:54 +0530 |
| commit | 12e210d90744948785b6ac007afae88456adc080 (patch) | |
| tree | 9b9f9a4bafaab23d956f42ffdc8f19fb68b55ac2 /gnu/packages/bioinformatics.scm | |
| parent | 3a2747ab74911c0c22f71ae06f72fe0d528d7f25 (diff) | |
| download | guix-patches-12e210d90744948785b6ac007afae88456adc080.tar guix-patches-12e210d90744948785b6ac007afae88456adc080.tar.gz | |
gnu: python-schema-salad: Update to 7.1.20210316164414.
* gnu/packages/bioinformatics.scm (python-schema-salad): Update to
7.1.20210316164414.
[arguments]: Add skip-failing-tests phase.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 18 |
1 files changed, 15 insertions, 3 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 475aa019d0..54641c6906 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -8,7 +8,7 @@ ;;; Copyright © 2016, 2020 Marius Bakke <mbakke@fastmail.com> ;;; Copyright © 2016, 2018 Raoul Bonnal <ilpuccio.febo@gmail.com> ;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr> -;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net> +;;; Copyright © 2017, 2021 Arun Isaac <arunisaac@systemreboot.net> ;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com> ;;; Copyright © 2018 Gábor Boskovits <boskovits@gmail.com> ;;; Copyright © 2018, 2019, 2020, 2021 Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> @@ -2596,15 +2596,27 @@ accessing bigWig files.") (define-public python-schema-salad (package (name "python-schema-salad") - (version "7.0.20200811075006") + (version "7.1.20210316164414") (source (origin (method url-fetch) (uri (pypi-uri "schema-salad" version)) (sha256 (base32 - "0wanbwmqb189x1m0vacnhpivfsr8rwbqknngivzxxs8j46yj80bg")))) + "04jaykdpgfnkrghvli5swxzqp7yba842am4bz42hcfljsmkrxvrk")))) (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'check 'skip-failing-tests + (lambda _ + ;; Skip tests that require network access. + (substitute* "schema_salad/tests/test_cwl11.py" + (("^def test_(secondaryFiles|outputBinding)" all) + (string-append "@pytest.mark.skip(reason=" + "\"test requires network access\")\n" + all))) + #t))))) (propagated-inputs `(("python-cachecontrol" ,python-cachecontrol-0.11) ("python-lockfile" ,python-lockfile) |