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author | Ricardo Wurmus <rekado@elephly.net> | 2019-12-09 18:09:07 +0100 |
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committer | Ricardo Wurmus <rekado@elephly.net> | 2019-12-09 18:11:20 +0100 |
commit | bf770d92402fbdfe1ea601db1d97bd888571b7e2 (patch) | |
tree | 33e71a92ecec5e258f18a1fe158eb8fb0b7641aa /gnu/packages/bioconductor.scm | |
parent | 151965fab41be41e798eceb85694a2030f0d127a (diff) | |
download | guix-patches-bf770d92402fbdfe1ea601db1d97bd888571b7e2.tar guix-patches-bf770d92402fbdfe1ea601db1d97bd888571b7e2.tar.gz |
gnu: r-metap: Update to 1.2.
* gnu/packages/cran.scm (r-metap): Move this from here...
* gnu/packages/bioconductor.scm (r-metap): ...to here and update to 1.2.
[propagated-inputs]: Add r-mutoss and r-tfisher.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r-- | gnu/packages/bioconductor.scm | 29 |
1 files changed, 29 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 733d4ec956..e584a7bced 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -3072,6 +3072,35 @@ are standardized and usable by the accompanying mutossGUI package.") ;; Any version of the GPL. (license (list license:gpl2+ license:gpl3+)))) +;; This is a CRAN package, but it depends on mutoss, which depends on multtest +;; from Bioconductor, so we put it here. +(define-public r-metap + (package + (name "r-metap") + (version "1.2") + (source + (origin + (method url-fetch) + (uri (cran-uri "metap" version)) + (sha256 + (base32 + "0pfbcixjrzx81l9wqhlp55khg9k63zf8pvg2n39c19akr4ppzhvf")))) + (build-system r-build-system) + (propagated-inputs + `(("r-lattice" ,r-lattice) + ("r-mutoss" ,r-mutoss) + ("r-rdpack" ,r-rdpack) + ("r-tfisher" ,r-tfisher))) + (home-page "http://www.dewey.myzen.co.uk/meta/meta.html") + (synopsis "Meta-analysis of significance values") + (description + "The canonical way to perform meta-analysis involves using effect sizes. +When they are not available this package provides a number of methods for +meta-analysis of significance values including the methods of Edgington, +Fisher, Stouffer, Tippett, and Wilkinson; a number of data-sets to replicate +published results; and a routine for graphical display.") + (license license:gpl2))) + (define-public r-triform (package (name "r-triform") |