summaryrefslogtreecommitdiff
path: root/gnu/packages/bioconductor.scm
diff options
context:
space:
mode:
authorzimoun <zimon.toutoune@gmail.com>2021-03-08 18:58:01 +0100
committerRicardo Wurmus <rekado@elephly.net>2021-03-12 14:45:54 +0100
commit2a9705768808ff8b76bf38a7ae9445b2c756ba46 (patch)
treebd1c7b6720674f5f412fe1693576fc7df5737f77 /gnu/packages/bioconductor.scm
parent4e7cf96c9f12c31152f4c67a1ce4d7d2ad9b2461 (diff)
downloadguix-patches-2a9705768808ff8b76bf38a7ae9445b2c756ba46.tar
guix-patches-2a9705768808ff8b76bf38a7ae9445b2c756ba46.tar.gz
gnu: r-gostats: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-gostats): Move from here... * gnu/packages/bioconductor.scm (r-gostats): ...to here.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm31
1 files changed, 31 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index aa172c5244..a4618ec90a 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1661,6 +1661,37 @@ exploration of the results.")
high-throughput sequencing experiments.")
(license license:artistic2.0)))
+(define-public r-gostats
+ (package
+ (name "r-gostats")
+ (version "2.56.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "GOstats" version))
+ (sha256
+ (base32
+ "18q8p0fv9fl2r6zjxknfjwqxr69dlyxy6c8amzn6c6dwjq1cxk6j"))))
+ (properties `((upstream-name . "GOstats")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-annotate" ,r-annotate)
+ ("r-annotationdbi" ,r-annotationdbi)
+ ("r-annotationforge" ,r-annotationforge)
+ ("r-biobase" ,r-biobase)
+ ("r-category" ,r-category)
+ ("r-go-db" ,r-go-db)
+ ("r-graph" ,r-graph)
+ ("r-rgraphviz" ,r-rgraphviz)
+ ("r-rbgl" ,r-rbgl)))
+ (home-page "https://bioconductor.org/packages/GOstats")
+ (synopsis "Tools for manipulating GO and microarrays")
+ (description
+ "This package provides a set of tools for interacting with GO and
+microarray data. A variety of basic manipulation tools for graphs, hypothesis
+testing and other simple calculations.")
+ (license license:artistic2.0)))
+
(define-public r-gseabase
(package
(name "r-gseabase")