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author | Ricardo Wurmus <rekado@elephly.net> | 2019-12-15 14:24:42 +0100 |
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committer | Ricardo Wurmus <rekado@elephly.net> | 2019-12-15 15:38:52 +0100 |
commit | c8ab9eb1b4d9af156d8008d43e6a7520e8718683 (patch) | |
tree | e62ef05c019a92c33772f9e1c0efa60e2f65617e | |
parent | 0dd4b7d73278ca0b90b2b74f8e64eb86fbb69d69 (diff) | |
download | guix-patches-c8ab9eb1b4d9af156d8008d43e6a7520e8718683.tar guix-patches-c8ab9eb1b4d9af156d8008d43e6a7520e8718683.tar.gz |
gnu: Add r-flowclust.
* gnu/packages/bioconductor.scm (r-flowclust): New variable.
-rw-r--r-- | gnu/packages/bioconductor.scm | 37 |
1 files changed, 37 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index cbb79da2d1..c59d799cc0 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -5434,6 +5434,43 @@ statistics to the plot.") "This package provides visualization tools for flow cytometry data.") (license license:artistic2.0))) +(define-public r-flowclust + (package + (name "r-flowclust") + (version "3.24.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "flowClust" version)) + (sha256 + (base32 + "0k4bgc4mf512njfdfg5ld9l7slgfxyfh766jab87j96zrrgcnj8s")))) + (properties `((upstream-name . "flowClust"))) + (build-system r-build-system) + (arguments + `(#:configure-flags + (list "--configure-args=--enable-bundled-gsl=no"))) + (propagated-inputs + `(("r-biobase" ,r-biobase) + ("r-biocgenerics" ,r-biocgenerics) + ("r-clue" ,r-clue) + ("r-corpcor" ,r-corpcor) + ("r-ellipse" ,r-ellipse) + ("r-flowcore" ,r-flowcore) + ("r-flowviz" ,r-flowviz) + ("r-graph" ,r-graph) + ("r-mnormt" ,r-mnormt))) + (inputs + `(("gsl" ,gsl))) + (native-inputs + `(("pkg-config" ,pkg-config))) + (home-page "https://bioconductor.org/packages/flowClust") + (synopsis "Clustering for flow cytometry") + (description + "This package provides robust model-based clustering using a t-mixture +model with Box-Cox transformation.") + (license license:artistic2.0))) + (define-public r-flowsom (package (name "r-flowsom") |