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| author | Vinicius Monego <monego@posteo.net> | 2024-04-11 09:42:08 +0000 |
|---|---|---|
| committer | Guix Patches Tester <> | 2024-04-17 14:15:46 +0200 |
| commit | d6d7b59f510227bb2c427f46c44126e390664b53 (patch) | |
| tree | 76da6fb755d6ef67a0b962384712a4a7be9f6292 | |
| parent | b47ae1ecc43baaf726701ab2d2f810ecfaa75428 (diff) | |
| download | guix-patches-issue-70336.tar guix-patches-issue-70336.tar.gz | |
gnu: Add python-libensemble.issue-70336
* gnu/packages/maths.scm (python-libensemble): New variable.
Change-Id: I45d4ba209af746f22f3f6c74a01063726478de0f
| -rw-r--r-- | gnu/packages/maths.scm | 53 |
1 files changed, 53 insertions, 0 deletions
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index cc42ce7902..5506201cbd 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -839,6 +839,59 @@ LP/MIP solver is included in the package.") (base32 "040sfaa9jclg2nqdh83w71sv9rc1sznpnfiripjdyr48cady50a2")))))) +(define-public python-libensemble + (package + (name "python-libensemble") + (version "1.2.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "libensemble" version)) + (sha256 + (base32 "0y46b8rk3dnnjnap76l80cj3ddkjcic1vcl706cajac19vnk8vlk")))) + (build-system pyproject-build-system) + (native-inputs (list ncurses + python-mock + python-mpi4py + python-pytest + python-pytest-cov + python-pytest-timeout)) + (propagated-inputs (list python-numpy + python-psutil + python-pydantic-2 + python-pyyaml + python-tomli)) + (arguments + (list + #:phases + #~(modify-phases %standard-phases + (add-after 'unpack 'relax-psutil + (lambda _ + (substitute* "setup.py" + (("psutil>=5.9.4") "psutil>=5.9.2")))) + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + ;; These files require MPI and call subprocesses. + (delete-file + "libensemble/tests/unit_tests/test_executor.py") + (delete-file + "libensemble/tests/unit_tests/test_executor_gpus.py") + ;; Run only unit tests, regression tests require MPI. + (setenv "TERM" "xterm") + ;; A very bad way to skip another MPI test. + (substitute* "libensemble/tests/run-tests.sh" + (("export UNIT_TEST_MPI_SUBDIR=.*") + "export UNIT_TEST_MPI_SUBDIR=''")) + ;; Run the test script. + (invoke "bash" "libensemble/tests/run-tests.sh" "-u"))))))) + (home-page "https://github.com/Libensemble/libensemble") + (synopsis "Toolkit for dynamic ensembles of calculations") + (description "@code{libensemble} is a a complete toolkit for dynamic +ensembles of calculations. It connects @code{deciders} to experiments or +simulations.") + (license license:bsd-3))) + (define-public linasm (package (name "linasm") |