From d0bd632f89e242a2a217d7e85194589f088f75ea Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Wed, 16 Dec 2015 14:45:28 +0100 Subject: import: Add Bioconductor importer and updater. * guix/import/cran.scm (%bioconductor-updater, latest-bioconductor-release, bioconductor-package?): New procedures. (cran->guix-package): Support repositories other than CRAN. (%bioconductor-url, %bioconductor-svn-url): New variables. (description->package): Update signature to distinguish between packages from different repositories. (latest-release): Rename procedure ... (latest-cran-release): ... to this. (cran-package?): Do not assume all R packages are available on CRAN. * tests/cran.scm: Update tests. * guix/scripts/import/cran.scm: Add "--archive" option and default to CRAN. * guix/scripts/refresh.scm (%updaters): Add "%bioconductor-updater". * doc/guix.texi: Document Bioconductor importer and updater. --- guix/scripts/refresh.scm | 1 + 1 file changed, 1 insertion(+) (limited to 'guix/scripts/refresh.scm') diff --git a/guix/scripts/refresh.scm b/guix/scripts/refresh.scm index a5834d12cc..f9e3f31a03 100644 --- a/guix/scripts/refresh.scm +++ b/guix/scripts/refresh.scm @@ -195,6 +195,7 @@ unavailable optional dependencies such as Guile-JSON." %gnome-updater %elpa-updater %cran-updater + %bioconductor-updater ((guix import pypi) => %pypi-updater))) (define (lookup-updater name) -- cgit v1.2.3