From 2794024dc276e6472137c33853bbef35eabac186 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 7 Sep 2021 14:37:59 +0200 Subject: gnu: Add r-biomvrcns. * gnu/packages/bioconductor.scm (r-biomvrcns): New variable. --- gnu/packages/bioconductor.scm | 28 ++++++++++++++++++++++++++++ 1 file changed, 28 insertions(+) (limited to 'gnu') diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 577727f336..b6e7c877ff 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -14249,6 +14249,34 @@ design.") design.") (license license:lgpl2.1+))) +(define-public r-biomvrcns + (package + (name "r-biomvrcns") + (version "1.32.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "biomvRCNS" version)) + (sha256 + (base32 + "0wyzj422smr4m9mswzn9inc1sn86pnia7jmd6k28nd2a7fjyrm16")))) + (properties `((upstream-name . "biomvRCNS"))) + (build-system r-build-system) + (propagated-inputs + `(("r-genomicranges" ,r-genomicranges) + ("r-gviz" ,r-gviz) + ("r-iranges" ,r-iranges) + ("r-mvtnorm" ,r-mvtnorm))) + (home-page "https://bioconductor.org/packages/biomvRCNS") + (synopsis "Copy number study and segmentation for multivariate biological data") + (description + "In this package, a @dfn{Hidden Semi Markov Model} (HSMM) and one +homogeneous segmentation model are designed and implemented for segmentation +genomic data, with the aim of assisting in transcripts detection using high +throughput technology like RNA-seq or tiling array, and copy number analysis +using aCGH or sequencing.") + (license license:gpl2+))) + (define-public r-tximeta (package (name "r-tximeta") -- cgit v1.2.3