From 174c29a8e09456618eacabe15c8d4a1b0e5a6b10 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Mon, 18 Oct 2021 20:51:00 +0000 Subject: gnu: salmon: Use older version of TBB. * gnu/packages/bioinformatics.scm (salmon)[arguments]: Define HAVE_NUMERIC_LIMITS128; compute TBB_VERSION. [inputs]: Replace tbb with tbb-for-salmon. --- gnu/packages/bioinformatics.scm | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) (limited to 'gnu') diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 7b41c06bf6..816e64aedb 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -9726,9 +9726,10 @@ The following file formats are supported: `(#:configure-flags (list (string-append "-Dlibgff_DIR=" (assoc-ref %build-inputs "libgff") "/lib") + "-DCMAKE_CXX_FLAGS=\"-DHAVE_NUMERIC_LIMITS128=1\"" "-Dlibgff_FOUND=TRUE" "-DTBB_FOUND=TRUE" - "-DTBB_VERSION=2020.3" + ,(string-append "-DTBB_VERSION=" (package-version tbb-for-salmon)) "-DTBB_LIBRARIES=tbb -ltbbmalloc" "-DFETCHED_PUFFERFISH=TRUE" "-DUSE_SHARED_LIBS=TRUE") @@ -9822,7 +9823,7 @@ The following file formats are supported: (sha256 (base32 "0qb4a2nl1d59qasr17sslgxnkjd5kbk5mns4cjshrmsvkrqp995n")))) - ("tbb" ,tbb) + ("tbb" ,tbb-for-salmon) ("libstadenio-for-salmon" ,libstadenio-for-salmon) ("xz" ,xz) ("zlib" ,zlib))) -- cgit v1.2.3