From 545ae3652e12221c5cacf41c2ff05f99e14622cd Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 11:31:54 +0100 Subject: gnu: r-arrow: Update to 6.0.1. * gnu/packages/cran.scm (r-arrow): Update to 6.0.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 0d87285e7a..368ef827a4 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -18529,14 +18529,14 @@ colored by the number of neighboring points. This is useful to visualize the (define-public r-arrow (package (name "r-arrow") - (version "5.0.0.2") + (version "6.0.1") (source (origin (method url-fetch) (uri (cran-uri "arrow" version)) (sha256 (base32 - "1ajkcmasj22j5k15ms7iyd1rg9qpdj5jya6nmhzh8z4iiv7gy13j")))) + "14fghz9xijcrck0c65crvfidgyhgzy9b2apwmg7qrgn2sy09xm0p")))) (properties `((upstream-name . "arrow"))) (build-system r-build-system) (inputs -- cgit v1.2.3 From 733b600eec5b62874c6d0f1b85e5f358c6d76c30 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 12:11:38 +0100 Subject: gnu: Add r-fontawesome. * gnu/packages/cran.scm (r-fontawesome): New variable. --- gnu/packages/cran.scm | 25 +++++++++++++++++++++++++ 1 file changed, 25 insertions(+) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 368ef827a4..e689bc42cc 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -581,6 +581,31 @@ ordered indexed observations. It is particularly aimed at irregular time series of numeric vectors/matrices and factors.") (license license:gpl2+))) +(define-public r-fontawesome + (package + (name "r-fontawesome") + (version "0.2.2") + (source + (origin + (method url-fetch) + (uri (cran-uri "fontawesome" version)) + (sha256 + (base32 "0r6zb5175cr4ybqj6bl0mbhadwv9xjxaf32yjc0y76rw3d6vcbap")))) + (properties `((upstream-name . "fontawesome"))) + (build-system r-build-system) + (propagated-inputs + `(("r-htmltools" ,r-htmltools) + ("r-rlang" ,r-rlang))) + (home-page "https://github.com/rstudio/fontawesome") + (synopsis "Easily work with Font Awesome icons") + (description + "Easily and flexibly insert Font Awesome icons into R Markdown documents +and Shiny apps. These icons can be inserted into HTML content through inline +SVG tags or @code{i} tags. There is also a utility function for exporting +Font Awesome icons as PNG images for those situations where raster graphics +are needed.") + (license license:expat))) + (define-public r-fingerprint (package (name "r-fingerprint") -- cgit v1.2.3 From 1fb9416098bcb4ddf1d031e4430fd6610e39ba49 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 12:12:30 +0100 Subject: gnu: r-shiny: Update to 1.7.1. * gnu/packages/cran.scm (r-shiny): Update to 1.7.1. [propagated-inputs]: Remove r-digest; add r-fontawesome. --- gnu/packages/cran.scm | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index e689bc42cc..5b48abecfc 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -2079,7 +2079,7 @@ previewing themes in real time.") (define-public r-shiny (package (name "r-shiny") - (version "1.6.0") + (version "1.7.1") (source (origin (method git-fetch) @@ -2089,7 +2089,7 @@ previewing themes in real time.") (file-name (git-file-name name version)) (sha256 (base32 - "0f6cwx5xyqzs40msq271sqhwl8736rwbm7kd1ldkcvxngzr4vlx9")) + "0wvc6jlgs41p05wbk8gahnl7sfnc4hpliyh9dbi5w52ngsg6wcr7")) (snippet '(for-each delete-file '("inst/www/shared/bootstrap/js/bootstrap.min.js" @@ -2165,9 +2165,9 @@ previewing themes in real time.") ("r-cachem" ,r-cachem) ("r-commonmark" ,r-commonmark) ("r-crayon" ,r-crayon) - ("r-digest" ,r-digest) ("r-ellipsis" ,r-ellipsis) ("r-fastmap" ,r-fastmap) + ("r-fontawesome" ,r-fontawesome) ("r-glue" ,r-glue) ("r-htmltools" ,r-htmltools) ("r-httpuv" ,r-httpuv) -- cgit v1.2.3 From 24ffb079529b3d727a6731962379089e1aaa0869 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:29:58 +0100 Subject: gnu: r-v8: Update to 3.6.0. * gnu/packages/cran.scm (r-v8): Update to 3.6.0. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 5b48abecfc..a166c65158 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -472,14 +472,14 @@ degree elevation and curve fitting.") (define-public r-v8 (package (name "r-v8") - (version "3.4.2") + (version "3.6.0") (source (origin (method url-fetch) (uri (cran-uri "V8" version)) (sha256 (base32 - "1vfj89shfzx7b6papi2y671l8gksng775kilmqzl5gx87i3l61i1")))) + "0xqk4rcv255r2wll2jpzf9ix8j6hbhw0vbhg2g9i6z2apyc9i5m3")))) (properties `((upstream-name . "V8"))) (build-system r-build-system) (arguments -- cgit v1.2.3 From cb5314e771add080b3643b330a3592c50ce412a4 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:30:36 +0100 Subject: gnu: r-ggpmisc: Update to 0.4.4. * gnu/packages/cran.scm (r-ggpmisc): Update to 0.4.4. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index a166c65158..f19599e364 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -731,13 +731,13 @@ axis} (SMA), and @dfn{ranged major axis} (RMA).") (define-public r-ggpmisc (package (name "r-ggpmisc") - (version "0.4.3") + (version "0.4.4") (source (origin (method url-fetch) (uri (cran-uri "ggpmisc" version)) (sha256 (base32 - "0ff84ybj4648c1v05ng3l62g9n52igjwvm320qkfbdzdxzncpzik")))) + "01dnr2a33zmgi0gjsxlcz4hp68b18xsi8z1lkhgcla5im59qf9xi")))) (build-system r-build-system) (propagated-inputs `(("r-dplyr" ,r-dplyr) -- cgit v1.2.3 From 608dfad15bfb4f977f889d7a1d64d23fd0a521d2 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:04 +0100 Subject: gnu: r-servr: Update to 0.24. * gnu/packages/cran.scm (r-servr): Update to 0.24. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index f19599e364..d250ef5ee3 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -1616,13 +1616,13 @@ in systems and applications.") (define-public r-servr (package (name "r-servr") - (version "0.23") + (version "0.24") (source (origin (method url-fetch) (uri (cran-uri "servr" version)) (sha256 (base32 - "1f1fgfgjgjsbn2krkbyw2qwkm0k4lq9p9jakg9zwyqlgpkdd34j4")))) + "11x0857m3xzdbzr4z0vx4fcdk36arfagyf2qgamvprich0qisknr")))) (build-system r-build-system) (propagated-inputs `(("r-httpuv" ,r-httpuv) -- cgit v1.2.3 From f70fb3c67583adf77a65f4b3dcd87c8f3f9c63e9 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:05 +0100 Subject: gnu: r-shinyfiles: Update to 0.9.1. * gnu/packages/cran.scm (r-shinyfiles): Update to 0.9.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index d250ef5ee3..0e8d5bae05 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -2328,13 +2328,13 @@ application framework for R, making it easy to create attractive dashboards.") (define-public r-shinyfiles (package (name "r-shinyfiles") - (version "0.9.0") + (version "0.9.1") (source (origin (method url-fetch) (uri (cran-uri "shinyFiles" version)) (sha256 - (base32 "0rsijlx16vd74r7bd8s9zipy71kgpw19v9s85kxj5bmwc6njmbai")))) + (base32 "0f8dfdiar376lx0979ccyghgx5rhr08v5z3z60asrrjsxlq4cs85")))) (properties `((upstream-name . "shinyFiles"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From 3e072b0890388c6002ff6aa70c4c338d9d4607fe Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:05 +0100 Subject: gnu: r-crosstalk: Update to 1.2.0. * gnu/packages/cran.scm (r-crosstalk): Update to 1.2.0. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 0e8d5bae05..45e7b19193 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -2659,14 +2659,14 @@ punctuation.") (define-public r-crosstalk (package (name "r-crosstalk") - (version "1.1.1") + (version "1.2.0") (source (origin (method url-fetch) (uri (cran-uri "crosstalk" version)) (sha256 (base32 - "1n6c6s7a6yxiwvva71x6bzcrim8xprl5s01fqiy61yq0y3vk8cpd")))) + "180y7mhpj17axpadwhh7s0qvrpdnag7g977vk256l96d6nmvlds2")))) (build-system r-build-system) (propagated-inputs `(("r-htmltools" ,r-htmltools) -- cgit v1.2.3 From beb2c44f30ac4e154b3c3d57828e7dc7b6ecb159 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:05 +0100 Subject: gnu: r-glue: Update to 1.5.0. * gnu/packages/cran.scm (r-glue): Update to 1.5.0. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 45e7b19193..7c3d653907 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -3040,14 +3040,14 @@ colors are provided.") (define-public r-glue (package (name "r-glue") - (version "1.4.2") + (version "1.5.0") (source (origin (method url-fetch) (uri (cran-uri "glue" version)) (sha256 (base32 - "1bgpirdvjrf0da734clrixawvpdap4lpda4g89vais96589m8wwz")))) + "1wjar579m46j1jnch34h7976sc1qbj6hzdyz5jm16nz1iw6z47jv")))) (build-system r-build-system) ;; knitr depends on glue, so we can't add knitr here to build the ;; vignettes. -- cgit v1.2.3 From e7f03b5bb70fe8fab35db5da27358477b7a30098 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:06 +0100 Subject: gnu: r-dendextend: Update to 1.15.2. * gnu/packages/cran.scm (r-dendextend): Update to 1.15.2. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 7c3d653907..0cbb95f334 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -3555,14 +3555,14 @@ rows, dropping names) to see if the modified versions are identical.") (define-public r-dendextend (package (name "r-dendextend") - (version "1.15.1") + (version "1.15.2") (source (origin (method url-fetch) (uri (cran-uri "dendextend" version)) (sha256 (base32 - "0zf4w4rc2jj30i3x0m0gnkwidfmn3cvz1wirp20amq4v3n9420md")))) + "06wjs8451hmnimzgngpzbai3yrgy33133vzzapa8jib9crdqi8sb")))) (build-system r-build-system) (propagated-inputs `(("r-ggplot2" ,r-ggplot2) -- cgit v1.2.3 From cfdb4ef30e19d715cb03e0e2bfa4a550324b6487 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:06 +0100 Subject: gnu: r-ff: Update to 4.0.5. * gnu/packages/cran.scm (r-ff): Update to 4.0.5. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 0cbb95f334..55da29634d 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -3634,14 +3634,14 @@ any subsequent lookup as it keeps the hash table in memory.") (define-public r-ff (package (name "r-ff") - (version "4.0.4") + (version "4.0.5") (source (origin (method url-fetch) (uri (cran-uri "ff" version)) (sha256 (base32 - "1rfj2ff5cxzdp9nvfnbgmswc1jvxz5vkxqgpv6gprwk32a0z3v12")))) + "0dsh6llfdz04w94xr3yl2b4vkk9g3rwhvfnxcd025v2424krxfls")))) (build-system r-build-system) (propagated-inputs `(("r-bit" ,r-bit))) (home-page "http://ff.r-forge.r-project.org/") -- cgit v1.2.3 From 12f543763127dfd491633753daab60554adde668 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:07 +0100 Subject: gnu: r-sp: Update to 1.4-6. * gnu/packages/cran.scm (r-sp): Update to 1.4-6. [native-inputs]: Add r-knitr. --- gnu/packages/cran.scm | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 55da29634d..81eaa9ebc3 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -3855,16 +3855,18 @@ most popular ones.") (define-public r-sp (package (name "r-sp") - (version "1.4-5") + (version "1.4-6") (source (origin (method url-fetch) (uri (cran-uri "sp" version)) (sha256 - (base32 "1nh9izsnszzm5kbq461w8bi0yh7fqzb74b2zmpg5qis0slbb5vkb")))) + (base32 "09m2ddbrbs2aqnq5si42ipa0g1vbd0pxg4zbcx59is2047pv7sws")))) (build-system r-build-system) (propagated-inputs `(("r-lattice" ,r-lattice))) + (native-inputs + `(("r-knitr" ,r-knitr))) (home-page "https://cran.r-project.org/web/packages/sp") (synopsis "Classes and methods for spatial data") (description -- cgit v1.2.3 From 8affb15409782f3b7e7593effd1459b1cbc758da Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:07 +0100 Subject: gnu: r-rmpi: Update to 0.6-9.2. * gnu/packages/cran.scm (r-rmpi): Update to 0.6-9.2. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 81eaa9ebc3..7a49e10137 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -3920,13 +3920,13 @@ matrices.") (define-public r-rmpi (package (name "r-rmpi") - (version "0.6-9.1") + (version "0.6-9.2") (source (origin (method url-fetch) (uri (cran-uri "Rmpi" version)) (sha256 (base32 - "1j8akqjan59yzwx2s1zxc214qyd323fd2i2dhgq0n11mb6ajmq4r")))) + "06mxqgrimhfsag5giv810c7ycdbaycqs4qcj41pnfbj0jypw32im")))) (properties `((upstream-name . "Rmpi"))) (build-system r-build-system) (arguments -- cgit v1.2.3 From 6ea44c4763ff788b080d5e03046d2b73567a29d0 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:07 +0100 Subject: gnu: r-lmtest: Update to 0.9-39. * gnu/packages/cran.scm (r-lmtest): Update to 0.9-39. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 7a49e10137..9241380406 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -4037,14 +4037,14 @@ or excesses over a high threshold.") (define-public r-lmtest (package (name "r-lmtest") - (version "0.9-38") + (version "0.9-39") (source (origin (method url-fetch) (uri (cran-uri "lmtest" version)) (sha256 (base32 - "0sr19bmw2cpagfvwg772m79wvl1i2hww1xfr69bzr3rr8pm2r8ij")))) + "126l0y7j2iy6g1w4zii1qkfcjq6wrnc3w2li0bz376smpryddy3i")))) (build-system r-build-system) (propagated-inputs `(("r-zoo" ,r-zoo))) -- cgit v1.2.3 From 8122e953bb4f7e3223176d8c1f2c5b1975c2cfe7 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:08 +0100 Subject: gnu: r-generics: Update to 0.1.1. * gnu/packages/cran.scm (r-generics): Update to 0.1.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 9241380406..596a6cbbbb 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -4857,14 +4857,14 @@ created using basic graphics.") (define-public r-generics (package (name "r-generics") - (version "0.1.0") + (version "0.1.1") (source (origin (method url-fetch) (uri (cran-uri "generics" version)) (sha256 (base32 - "0qw7r0d2qvlj1pvrlpv30d6akml624ydxkk19hv85iv6pfyx2wdb")))) + "04hrn6g5m5vi3znrcha3jw2q16lnmm3ygx2jl5aqiahg3azqwix2")))) (build-system r-build-system) (home-page "https://github.com/r-lib/generics") (synopsis "Common S3 generics not provided by base R methods") -- cgit v1.2.3 From 55db1a8851dd97de1b01fd3d10627c7bf00a4d45 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:08 +0100 Subject: gnu: r-broom: Update to 0.7.10. * gnu/packages/cran.scm (r-broom): Update to 0.7.10. [propagated-inputs]: Add r-ggplot2. --- gnu/packages/cran.scm | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 596a6cbbbb..1fad7836fc 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -4877,20 +4877,21 @@ by base R methods related to model fitting.") (define-public r-broom (package (name "r-broom") - (version "0.7.9") + (version "0.7.10") (source (origin (method url-fetch) (uri (cran-uri "broom" version)) (sha256 (base32 - "1z65qyhkhkyalxhrvpsa7n8pickj9fjs8r4gzdvjp2rpggwramhx")))) + "0ks64xwkaqh5cinq8j56d89rn9kipm7cdipsgqmz9xxy7ajxb7qj")))) (build-system r-build-system) (propagated-inputs `(("r-backports" ,r-backports) ("r-dplyr" ,r-dplyr) ("r-ellipsis" ,r-ellipsis) ("r-generics" ,r-generics) + ("r-ggplot2" ,r-ggplot2) ("r-glue" ,r-glue) ("r-purrr" ,r-purrr) ("r-rlang" ,r-rlang) -- cgit v1.2.3 From 223b7bfd4f2f8a176420a4106da6b92f8e9f2314 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:09 +0100 Subject: gnu: r-corrplot: Update to 0.92. * gnu/packages/cran.scm (r-corrplot): Update to 0.92. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 1fad7836fc..3c3970eb7a 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -5011,14 +5011,14 @@ from the data points.") (define-public r-corrplot (package (name "r-corrplot") - (version "0.90") + (version "0.92") (source (origin (method url-fetch) (uri (cran-uri "corrplot" version)) (sha256 (base32 - "1pfmjqgakf7706l9257lqqnb6kin79gc94xfg7w47x2ijchiz1yr")))) + "1g98jk6xsl08z4n6sy5vriif99m31zhbz7j3dh1kfj4w7yb9zh78")))) (build-system r-build-system) (native-inputs `(("r-knitr" ,r-knitr))) -- cgit v1.2.3 From 82258b2101e7a1fab84888b175cd0eee73531f76 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:09 +0100 Subject: gnu: r-hardyweinberg: Update to 1.7.3. * gnu/packages/cran.scm (r-hardyweinberg): Update to 1.7.3. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 3c3970eb7a..fdf75c7eff 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -5295,14 +5295,14 @@ programming} (SQP) based solver).") (define-public r-hardyweinberg (package (name "r-hardyweinberg") - (version "1.7.2") + (version "1.7.3") (source (origin (method url-fetch) (uri (cran-uri "HardyWeinberg" version)) (sha256 (base32 - "0g10jh71yp0pcag44z409xqb6d941l7y887a632962bk5rgn6q5p")))) + "0ppkzbhrb83dj796pm6gn5ypsf1ql8d9b3fv47w63i0snkhxfiv4")))) (properties `((upstream-name . "HardyWeinberg"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From 426f10733f53a86d7c9f7a4aeabee70614dfd822 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:09 +0100 Subject: gnu: r-venndiagram: Update to 1.7.0. * gnu/packages/cran.scm (r-venndiagram): Update to 1.7.0. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index fdf75c7eff..bacf977882 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -5349,13 +5349,13 @@ and density estimation") (define-public r-venndiagram (package (name "r-venndiagram") - (version "1.6.20") + (version "1.7.0") (source (origin (method url-fetch) (uri (cran-uri "VennDiagram" version)) (sha256 (base32 - "1ic1jaxzw98si2p4n1fl4n3myhd7fpw0njb634cwhviwybzv6775")))) + "1l9mmc8wwn885l2b13kshhrkz53pqigcw6d8gklvv92fx5m5cdvm")))) (properties `((upstream-name . "VennDiagram"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From b816a8a8d34ae7bd344c2b4c3c42cec41898cff1 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:10 +0100 Subject: gnu: r-cli: Update to 3.1.0. * gnu/packages/cran.scm (r-cli): Update to 3.1.0. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index bacf977882..38a9cae9e6 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -5693,14 +5693,14 @@ plots in @code{ggplot2}.") (define-public r-cli (package (name "r-cli") - (version "3.0.1") + (version "3.1.0") (source (origin (method url-fetch) (uri (cran-uri "cli" version)) (sha256 (base32 - "1zdld2cr83k4v7yrwa2csvcafwslwr610vk70mv1a3knrnv2b6nq")))) + "04ff3bgsahi736s8l6a26zlwwil8jw4shx7bb56ah1pp1f1n22n7")))) (build-system r-build-system) (propagated-inputs `(("r-glue" ,r-glue))) -- cgit v1.2.3 From a36acdbf91d209ecfd961912e8a0acaebe7390d5 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:10 +0100 Subject: gnu: r-xfun: Update to 0.28. * gnu/packages/cran.scm (r-xfun): Update to 0.28. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 38a9cae9e6..19db8b6fa2 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -5900,13 +5900,13 @@ iVAT).") (define-public r-xfun (package (name "r-xfun") - (version "0.27") + (version "0.28") (source (origin (method url-fetch) (uri (cran-uri "xfun" version)) (sha256 - (base32 "11alh3kasiizfar0f667m5sj3s5443fggjv0541ghmxwlqrvyxf7")))) + (base32 "0civd050r94w2vwfx3xgz1w36wkwrkm5dscdv5kb3klbvqwy8nqb")))) (build-system r-build-system) ;; knitr itself depends on xfun #; -- cgit v1.2.3 From d3e10827f8317bc9702a0c41f7795eebdc46eab3 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:10 +0100 Subject: gnu: r-uuid: Update to 1.0-3. * gnu/packages/cran.scm (r-uuid): Update to 1.0-3. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 19db8b6fa2..1eb73a783d 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -6054,14 +6054,14 @@ packages that work with genomic data.") (define-public r-uuid (package (name "r-uuid") - (version "0.1-4") + (version "1.0-3") (source (origin (method url-fetch) (uri (cran-uri "uuid" version)) (sha256 (base32 - "0gm9ii7ncvllxbvyk6srsiinjmqyj7lmh84w43x4nhqpvafj9q4q")))) + "0il35jnci537r8zkinyiy5jp5q530p85ln6dswpj884zclrlcvj5")))) (build-system r-build-system) (home-page "https://www.rforge.net/uuid") (synopsis "Tools for generating and handling of UUIDs") -- cgit v1.2.3 From 14b8316e73f46eeed86b8f46be32148e50c67cb9 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:11 +0100 Subject: gnu: r-tinytex: Update to 0.35. * gnu/packages/cran.scm (r-tinytex): Update to 0.35. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 1eb73a783d..060d281c71 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -6073,14 +6073,14 @@ packages that work with genomic data.") (define-public r-tinytex (package (name "r-tinytex") - (version "0.34") + (version "0.35") (source (origin (method url-fetch) (uri (cran-uri "tinytex" version)) (sha256 (base32 - "16z6v06pmvg02rbxkqyiidasg1dryy759zabnqjw6y85nybr618x")))) + "04ng34kfds2isz4j9ch1xlii0dfclqay9fsc6wvr6sfifzv9fqyk")))) (build-system r-build-system) (propagated-inputs `(("r-xfun" ,r-xfun))) -- cgit v1.2.3 From 9d6a6fd566dd4abff5c824a4d4908601b95137c2 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:11 +0100 Subject: gnu: r-tseries: Update to 0.10-49. * gnu/packages/cran.scm (r-tseries): Update to 0.10-49. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 060d281c71..4483061d53 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -6454,14 +6454,14 @@ financial trading strategies.") (define-public r-tseries (package (name "r-tseries") - (version "0.10-48") + (version "0.10-49") (source (origin (method url-fetch) (uri (cran-uri "tseries" version)) (sha256 (base32 - "0wa4rcf0igayi1yrwc6wak6d491560p0z89rz32haqlkiiq25gak")))) + "1fhldj95d16cwygw8xg0kvr4xk569mpzprdvahlsf4hzykc2dgs5")))) (build-system r-build-system) (propagated-inputs `(("r-quadprog" ,r-quadprog) -- cgit v1.2.3 From bc28b55a2f0e2b35f0b324ffa58b2f0b375f33a0 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:11 +0100 Subject: gnu: r-radiant-data: Update to 1.4.1. * gnu/packages/cran.scm (r-radiant-data): Update to 1.4.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 4483061d53..349cf1bf7b 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -7018,14 +7018,14 @@ systems.") (define-public r-radiant-data (package (name "r-radiant-data") - (version "1.3.12") + (version "1.4.1") (source (origin (method url-fetch) (uri (cran-uri "radiant.data" version)) (sha256 (base32 - "08bqqrfvpgyf613ikihwfnzb23l23f5nfs7zynnxbjxc1zfhbpny")) + "12x4nz5n6yz1a67ji79pwvznp9flmn50hpp9y9sfhixir7dvwy27")) (modules '((guix build utils))) (snippet '(begin -- cgit v1.2.3 From 1875cd2a5d5e3bed61ac8be8da407274b1040887 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:12 +0100 Subject: gnu: r-arules: Update to 1.7-1. * gnu/packages/cran.scm (r-arules): Update to 1.7-1. [propagated-inputs]: Add r-generics. --- gnu/packages/cran.scm | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 349cf1bf7b..0dfc3e4b21 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -7391,17 +7391,18 @@ evaluated by the @dfn{Akaike Information Criterion} (AIC).") (define-public r-arules (package (name "r-arules") - (version "1.6-8") + (version "1.7-1") (source (origin (method url-fetch) (uri (cran-uri "arules" version)) (sha256 (base32 - "1gy6wrys1qqik65dyr325hdbfmd3fx9a2lzdnrr29g751hprjx2l")))) + "0zzwr1mg92ha5l6razdb04da8ik3z3k74rm0rah44l1j2a6d30sk")))) (build-system r-build-system) (propagated-inputs - `(("r-matrix" ,r-matrix))) + `(("r-generics" ,r-generics) + ("r-matrix" ,r-matrix))) (home-page "https://github.com/mhahsler/arules") (synopsis "Mining association rules and frequent itemsets") (description -- cgit v1.2.3 From 655aac7d3ae867995ad3ba4b16ca2515bd80b24e Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:12 +0100 Subject: gnu: r-rio: Update to 0.5.29. * gnu/packages/cran.scm (r-rio): Update to 0.5.29. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 0dfc3e4b21..a3c79bf535 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -7537,14 +7537,14 @@ dependency on Java.") (define-public r-rio (package (name "r-rio") - (version "0.5.27") + (version "0.5.29") (source (origin (method url-fetch) (uri (cran-uri "rio" version)) (sha256 (base32 - "02nxwg1d2m1h09a6ismhcp71gmq1c8rhbbl98if2v7xsvdn63sz0")))) + "04jlrhyl0791yxwcpp1s8p1hhkljnijlc5iaxpk56h41w63k39lz")))) (build-system r-build-system) (propagated-inputs `(("r-curl" ,r-curl) -- cgit v1.2.3 From 25cfae9dd98bc73d2c3b8b5338913eeec80704ae Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:13 +0100 Subject: gnu: r-rastervis: Update to 0.51.1. * gnu/packages/cran.scm (r-rastervis): Update to 0.51.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index a3c79bf535..8894660476 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -7948,14 +7948,14 @@ Python's @url{https://github.com/ActiveState/appdirs,Appdirs} to R.") (define-public r-rastervis (package (name "r-rastervis") - (version "0.51.0") + (version "0.51.1") (source (origin (method url-fetch) (uri (cran-uri "rasterVis" version)) (sha256 (base32 - "1gkn5na7cspnh3qpmi4k5n65crmp8c2s106g8hh51lsdvm5369aj")))) + "1mg11njzajx9az6xjghjl2sna6wzs85ga8fhy9w43l2n8icsfbr2")))) (properties `((upstream-name . "rasterVis"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From a04d306571d8876789dc834f570d71ebf63e2b3d Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:13 +0100 Subject: gnu: r-hdf5r: Update to 1.3.5. * gnu/packages/cran.scm (r-hdf5r): Update to 1.3.5. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 8894660476..8066748ae4 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -8485,14 +8485,14 @@ results to the user.") (define-public r-hdf5r (package (name "r-hdf5r") - (version "1.3.4") + (version "1.3.5") (source (origin (method url-fetch) (uri (cran-uri "hdf5r" version)) (sha256 (base32 - "0lxbdw1xf5yp82fkdj4wzp5mslay3qxd65459vh09dj131h5gl34")))) + "0bv2q4ir73sbk5ra2q4mc8wbcmiwkws8k0mjlnx9ysi2mdrm3dw7")))) (build-system r-build-system) (inputs `(("hdf5" ,hdf5) -- cgit v1.2.3 From e0e8c20b002428c5b7d76eea23d355118f8e03a0 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:14 +0100 Subject: gnu: r-officer: Update to 0.4.1. * gnu/packages/cran.scm (r-officer): Update to 0.4.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 8066748ae4..1998a8ae46 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -8651,14 +8651,14 @@ references and Rd files.") (define-public r-officer (package (name "r-officer") - (version "0.4.0") + (version "0.4.1") (source (origin (method url-fetch) (uri (cran-uri "officer" version)) (sha256 (base32 - "1za3vb1wmsianh9ygm6h5lyf796rni6w2adplz4z6z93r3mz4cmv")))) + "1gfx299zr4q2264q37994pirv5bd5isn1cszccz603ij3q40wajr")))) (build-system r-build-system) (propagated-inputs `(("r-r6" ,r-r6) -- cgit v1.2.3 From 5ab73c526919ebc8fdd3bd141e05cfc67e236492 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:14 +0100 Subject: gnu: r-flextable: Update to 0.6.10. * gnu/packages/cran.scm (r-flextable): Update to 0.6.10. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 1998a8ae46..2a93cee6e2 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -9013,14 +9013,14 @@ functions.") (define-public r-flextable (package (name "r-flextable") - (version "0.6.9") + (version "0.6.10") (source (origin (method url-fetch) (uri (cran-uri "flextable" version)) (sha256 (base32 - "15lba98wnci2nsndj86gx3k94q9lfxhp5nr5xlhgcnycyj1c9zjx")))) + "01nm0357b0z4dgrplbq9ms63j51n0rgvvxyy068zdsc5p7j3lql2")))) (build-system r-build-system) (propagated-inputs `(("r-base64enc" ,r-base64enc) -- cgit v1.2.3 From bb2cfc8254d67e9f879c9c1b16eb508a45b04200 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:14 +0100 Subject: gnu: r-slam: Update to 0.1-49. * gnu/packages/cran.scm (r-slam): Update to 0.1-49. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 2a93cee6e2..0b35278d01 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -9456,13 +9456,13 @@ the analyzed items.") (define-public r-slam (package (name "r-slam") - (version "0.1-48") + (version "0.1-49") (source (origin (method url-fetch) (uri (cran-uri "slam" version)) (sha256 - (base32 "1ppsvkph4v1dffxgp12a4wnr9arj7pkmh4qv0and3f6nbz9k42qa")))) + (base32 "044hnfqbx57v5zr64gl09b5arj45swn9ywqzrl9rsc8267ys0028")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/slam/") (synopsis "Sparse lightweight arrays and matrices") -- cgit v1.2.3 From d81c981b0567eebf39b703ff168e6f87a399bb9e Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:15 +0100 Subject: gnu: r-labelled: Update to 2.9.0. * gnu/packages/cran.scm (r-labelled): Update to 2.9.0. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 0b35278d01..09672f0e88 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -10065,14 +10065,14 @@ subsequence} (LCS) using a dynamic programming algorithm.") (define-public r-labelled (package (name "r-labelled") - (version "2.8.0") + (version "2.9.0") (source (origin (method url-fetch) (uri (cran-uri "labelled" version)) (sha256 (base32 - "0fs8fhmk9j2nv2j87mpkmm0clz34f8kybnzn6pzqpcbwk0i2pcwg")))) + "0ffnhlr239nqcwb35m4hll21abnnhpmyy5wlxnyahrg0kqb0xb1n")))) (properties `((upstream-name . "labelled"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From 2ced098512ecd754d3cb35616c811673365ef18d Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:15 +0100 Subject: gnu: r-mosaic: Update to 1.8.3. * gnu/packages/cran.scm (r-mosaic): Update to 1.8.3. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 09672f0e88..d4c420f885 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -10173,13 +10173,13 @@ Processing of very large files is supported.") (define-public r-mosaic (package (name "r-mosaic") - (version "1.4.0") + (version "1.8.3") (source (origin (method url-fetch) (uri (cran-uri "mosaic" version)) (sha256 - (base32 "10jbrg8kli00kfgbh2f67bymm5cnlancc9dplb1j7fl552yjddn2")))) + (base32 "1y0isqbva0vi5zlx1xvixbq87n4xp66ljh43qnd0cpzaz0mn21cg")))) (build-system r-build-system) (propagated-inputs `(("r-broom" ,r-broom) -- cgit v1.2.3 From 3da3edfb9f031db7663089bc29f61710e0d9ff79 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:16 +0100 Subject: gnu: r-bayestestr: Update to 0.11.5. * gnu/packages/cran.scm (r-bayestestr): Update to 0.11.5. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index d4c420f885..f9e45221ce 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -11428,14 +11428,14 @@ differentiation.") (define-public r-bayestestr (package (name "r-bayestestr") - (version "0.11.0") + (version "0.11.5") (source (origin (method url-fetch) (uri (cran-uri "bayestestR" version)) (sha256 (base32 - "0bwfw1lh4yp8y77sfmxzqqqy5aw59q1lqhfcssa46ph6d4hyxwic")))) + "0lz8mzacxgmll576p88654mrvlk4pzvhwwghvn5pm7zxisgx0kq0")))) (properties `((upstream-name . "bayestestR"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From 1bb245cf0a9713ef574b6ccb087e65fc01c82e0e Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:16 +0100 Subject: gnu: r-gert: Update to 1.4.3. * gnu/packages/cran.scm (r-gert): Update to 1.4.3. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index f9e45221ce..cd7331af77 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -11745,14 +11745,14 @@ user credentials.") (define-public r-gert (package (name "r-gert") - (version "1.4.1") + (version "1.4.3") (source (origin (method url-fetch) (uri (cran-uri "gert" version)) (sha256 (base32 - "1y3318whcifdng87wyngfjq18601zrlj4d8sx40v2c2m5kqmhfv2")))) + "06g3gy4260y4f43zgahamckisjs8dvl06rb0kyinrwlm675dqppm")))) (properties `((upstream-name . "gert"))) (build-system r-build-system) (inputs -- cgit v1.2.3 From 79791575746663ee404b17db78f7ec7c057af7ee Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:16 +0100 Subject: gnu: r-usethis: Update to 2.1.3. * gnu/packages/cran.scm (r-usethis): Update to 2.1.3. [propagated-inputs]: Remove r-ellipsis. --- gnu/packages/cran.scm | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index cd7331af77..535972aa96 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -11781,14 +11781,14 @@ User credentials are shared with command line git through the (define-public r-usethis (package (name "r-usethis") - (version "2.1.0") + (version "2.1.3") (source (origin (method url-fetch) (uri (cran-uri "usethis" version)) (sha256 (base32 - "1s40rbr2z9bilsldp8pv5abrr7n0ixyxi2qqbf4hfhs14rhigncy")))) + "1gwvirp53pa0zychd7d47d56a2vfdzz7l3p61l8m9n270ac7bc1d")))) (build-system r-build-system) (propagated-inputs `(("r-cli" ,r-cli) @@ -11796,7 +11796,6 @@ User credentials are shared with command line git through the ("r-crayon" ,r-crayon) ("r-curl" ,r-curl) ("r-desc" ,r-desc) - ("r-ellipsis" ,r-ellipsis) ("r-fs" ,r-fs) ("r-gert" ,r-gert) ("r-gh" ,r-gh) -- cgit v1.2.3 From e4e30df8ca9d60c36ae8092f8c72c73d210f8217 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:17 +0100 Subject: gnu: r-sessioninfo: Update to 1.2.1. * gnu/packages/cran.scm (r-sessioninfo): Update to 1.2.1. [propagated-inputs]: Remove r-withr. --- gnu/packages/cran.scm | 7 +++---- 1 file changed, 3 insertions(+), 4 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 535972aa96..2af879743f 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -11822,18 +11822,17 @@ Rcpp, RStudio projects, and more.") (define-public r-sessioninfo (package (name "r-sessioninfo") - (version "1.1.1") + (version "1.2.1") (source (origin (method url-fetch) (uri (cran-uri "sessioninfo" version)) (sha256 (base32 - "0j5f3l58fynxx3v0w62vqpii7miabszgljpja36xx9s8hikh8sqn")))) + "0w3vhp652524348a4cfyvvs8z9xpxkcznw8x406nvkwfh0gdyka2")))) (build-system r-build-system) (propagated-inputs - `(("r-cli" ,r-cli) - ("r-withr" ,r-withr))) + `(("r-cli" ,r-cli))) (home-page "https://github.com/r-lib/sessioninfo#readme") (synopsis "R session information") (description -- cgit v1.2.3 From 387e6b512971529009640b51585625185c7ee37a Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:17 +0100 Subject: gnu: r-rslurm: Update to 0.6.1. * gnu/packages/cran.scm (r-rslurm): Update to 0.6.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 2af879743f..8e24cb40cf 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -12272,14 +12272,14 @@ inside R when they might usually leave to execute non-R software.") (define-public r-rslurm (package (name "r-rslurm") - (version "0.6.0") + (version "0.6.1") (source (origin (method url-fetch) (uri (cran-uri "rslurm" version)) (sha256 (base32 - "0fn2na8prsaxa03x5wi3105gpsxc35qvgmik7wy3nylvx4wdfv9g")))) + "19451icfh7snjbbmpzpr1hrdf52q8ijv0ag1di3y55r2la3jxxcf")))) (properties `((upstream-name . "rslurm"))) (build-system r-build-system) (propagated-inputs `(("r-whisker" ,r-whisker))) -- cgit v1.2.3 From 109f9d97565f0c1b3446148d1c022559034dc625 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:18 +0100 Subject: gnu: r-ncdf4: Update to 1.17.1. * gnu/packages/cran.scm (r-ncdf4): Update to 1.17.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 8e24cb40cf..319e594750 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -12418,14 +12418,14 @@ other values.") (define-public r-ncdf4 (package (name "r-ncdf4") - (version "1.17") + (version "1.17.1") (source (origin (method url-fetch) (uri (cran-uri "ncdf4" version)) (sha256 (base32 - "1xls44ln2zjrrlimxl8v4bk2ni3g45c9j0gxdnjx31rikmrc95fv")))) + "1fyjhp2zkvp7ls1sxn623far7473lpkfsqqvj3a1fczpmqs6iw4m")))) (build-system r-build-system) (inputs `(("netcdf" ,netcdf) -- cgit v1.2.3 From 5a9e06ea95b9e65397cf87ba7d66e775626062ae Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:18 +0100 Subject: gnu: r-rgl: Update to 0.108.3. * gnu/packages/cran.scm (r-rgl): Update to 0.108.3. [propagated-inputs]: Remove r-crosstalk; add r-r6. --- gnu/packages/cran.scm | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 319e594750..7ac75c9e57 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -12466,14 +12466,14 @@ Bioconductor packages.") (define-public r-rgl (package (name "r-rgl") - (version "0.107.14") + (version "0.108.3") (source (origin (method url-fetch) (uri (cran-uri "rgl" version)) (sha256 (base32 - "1z5h4wbjj18prcykc96rqcn699pnqw6vybwj2mpbbbdw2lr3q8b7")))) + "0fqkx079z9y5b1gdg6qfz2wpw2j8q3ddflfkd9wwrkyacas6xyc9")))) (build-system r-build-system) (native-inputs `(("pkg-config" ,pkg-config) @@ -12486,12 +12486,12 @@ Bioconductor packages.") ("pandoc" ,pandoc) ("zlib" ,zlib))) (propagated-inputs - `(("r-crosstalk" ,r-crosstalk) - ("r-htmltools" ,r-htmltools) + `(("r-htmltools" ,r-htmltools) ("r-htmlwidgets" ,r-htmlwidgets) ("r-jsonlite" ,r-jsonlite) ("r-knitr" ,r-knitr) - ("r-magrittr" ,r-magrittr))) + ("r-magrittr" ,r-magrittr) + ("r-r6" ,r-r6))) (home-page "https://r-forge.r-project.org/projects/rgl/") (synopsis "3D visualization using OpenGL") (description -- cgit v1.2.3 From 8f32025fcb3b5870efde9530e0684993b879e5dc Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:19 +0100 Subject: gnu: r-gsl: Update to 2.1-7.1. * gnu/packages/cran.scm (r-gsl): Update to 2.1-7.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 7ac75c9e57..d782d887ce 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -12746,14 +12746,14 @@ parametrizations of Nolan.") (define-public r-gsl (package (name "r-gsl") - (version "2.1-7") + (version "2.1-7.1") (source (origin (method url-fetch) (uri (cran-uri "gsl" version)) (sha256 (base32 - "05rvky8sh3jrlz0xbd6nss8h8ykfg1v10dymhlmcykl6v5csz1hs")))) + "118rj9kjx9rzlynvhrly19qz3yxg8jzws35971ssgzrp5lwd367f")))) (build-system r-build-system) (inputs `(("gsl" ,gsl))) -- cgit v1.2.3 From 4d6d0d2c043e3193f982b2b1342e0fc1a4962699 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:19 +0100 Subject: gnu: r-tiff: Update to 0.1-10. * gnu/packages/cran.scm (r-tiff): Update to 0.1-10. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index d782d887ce..7f2f6deca1 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -12871,14 +12871,14 @@ redundant complex conjugate when the input is real data.") (define-public r-tiff (package (name "r-tiff") - (version "0.1-8") + (version "0.1-10") (source (origin (method url-fetch) (uri (cran-uri "tiff" version)) (sha256 (base32 - "18m17g5q3nz4v4wrqxnb129b1j02873g2vknddczkklf1pvq4x2b")))) + "1zha6bzb1rmfl6n2xjkygs9wfi3ah9cjr7a6jzk4zqc5kvl58lak")))) (build-system r-build-system) (inputs `(("libtiff" ,libtiff) -- cgit v1.2.3 From 1b6fc8812dfd85c3720d22f97fcac50fd456cb3d Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:20 +0100 Subject: gnu: r-tidytree: Update to 0.3.6. * gnu/packages/cran.scm (r-tidytree): Update to 0.3.6. [propagated-inputs]: Add r-yulab-utils. --- gnu/packages/cran.scm | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 7f2f6deca1..ac22af12ec 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -13014,13 +13014,13 @@ maps.") (define-public r-tidytree (package (name "r-tidytree") - (version "0.3.5") + (version "0.3.6") (source (origin (method url-fetch) (uri (cran-uri "tidytree" version)) (sha256 - (base32 "0zk46n3nh577k2jy34isdw845hk0blkvqk7rg5nmix5b65qsp762")))) + (base32 "1gnpm4zz0kvqng5s179301q0h5993ajynm8y0zbdz38qcmzfpsdk")))) (build-system r-build-system) (propagated-inputs `(("r-ape" ,r-ape) @@ -13030,7 +13030,8 @@ maps.") ("r-rlang" ,r-rlang) ("r-tibble" ,r-tibble) ("r-tidyr" ,r-tidyr) - ("r-tidyselect" ,r-tidyselect))) + ("r-tidyselect" ,r-tidyselect) + ("r-yulab-utils" ,r-yulab-utils))) (native-inputs `(("r-knitr" ,r-knitr))) (home-page "https://github.com/GuangchuangYu/tidytree") -- cgit v1.2.3 From d34ed31acad046b7ce4ac8dba432a05a0bc99dea Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:20 +0100 Subject: gnu: r-ore: Update to 1.7.1.1. * gnu/packages/cran.scm (r-ore): Update to 1.7.1.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index ac22af12ec..9c407cdbc9 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -13533,13 +13533,13 @@ creating color scales and calculating color distances.") (define-public r-ore (package (name "r-ore") - (version "1.7.0") + (version "1.7.1.1") (source (origin (method url-fetch) (uri (cran-uri "ore" version)) (sha256 - (base32 "0qhbv7bynisr0prv7h0yxsxff7qdxfqza7i06xi4vn360kxx6w9g")))) + (base32 "0rs5r5h11x4l4nsbl4xqzbl4ahajd5374fq05abcmfjnjr9j64w5")))) (build-system r-build-system) (home-page "https://github.com/jonclayden/ore") (synopsis "R interface to the Onigmo regular expression library") -- cgit v1.2.3 From 191f16eadb222b317b9c87d8dffbae05e491c99e Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:21 +0100 Subject: gnu: r-grimport: Update to 0.9-5. * gnu/packages/cran.scm (r-grimport): Update to 0.9-5. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 9c407cdbc9..8a52341dc6 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -13604,14 +13604,14 @@ handling.") (define-public r-grimport (package (name "r-grimport") - (version "0.9-4") + (version "0.9-5") (source (origin (method url-fetch) (uri (cran-uri "grImport" version)) (sha256 (base32 - "0y9lsvfp1350das5v5d5pkv10z0n1crc7k4zn9inr94f9s4kjjr5")))) + "0pbzc45wgp0cpycnw0bzn65ckdszzay0zrp7c7ssxdkifp8bai3a")))) (properties `((upstream-name . "grImport"))) (build-system r-build-system) (inputs -- cgit v1.2.3 From b06329d5fce734eb329c55c054ac33ba57de3e24 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:21 +0100 Subject: gnu: r-gmp: Update to 0.6-2.1. * gnu/packages/cran.scm (r-gmp): Update to 0.6-2.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 8a52341dc6..1e7fb582f9 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -13939,14 +13939,14 @@ preparing, executing, and processing HTTP requests.") (define-public r-gmp (package (name "r-gmp") - (version "0.6-2") + (version "0.6-2.1") (source (origin (method url-fetch) (uri (cran-uri "gmp" version)) (sha256 (base32 - "03kzbflgpy5sgnzxmhshs5qv7jjmfc113ybkhxys4z8y7xdv9z3b")))) + "1mj7hy6riaxl9n4q2cnyyjazwad90xbjszk25si968618rih4n64")))) (build-system r-build-system) (arguments '(#:phases -- cgit v1.2.3 From 252066b471d2cd8999ca47401a09a684a02e0ce7 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:21 +0100 Subject: gnu: r-rmpfr: Update to 0.8-7. * gnu/packages/cran.scm (r-rmpfr): Update to 0.8-7. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 1e7fb582f9..8f89e78e16 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -13966,14 +13966,14 @@ limitations\" using the GNU Multiple Precision library.") (define-public r-rmpfr (package (name "r-rmpfr") - (version "0.8-5") + (version "0.8-7") (source (origin (method url-fetch) (uri (cran-uri "Rmpfr" version)) (sha256 (base32 - "1a37zaahcyccb5kgad98z4dh9n75vffmiziv4al8axvihxqs5hjn")))) + "1ljpbxvm4agbxnab5dfffbpw5k964hy3gw57dzydq1gpbxwdphlk")))) (properties `((upstream-name . "Rmpfr"))) (build-system r-build-system) (inputs -- cgit v1.2.3 From b9137051fa92d7ac79da6cdebd92fc737bfd7dfd Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:22 +0100 Subject: gnu: r-fields: Update to 13.3. * gnu/packages/cran.scm (r-fields): Update to 13.3. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 8f89e78e16..0bcccfd8dd 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -14466,13 +14466,13 @@ Differences with other sparse matrix packages are: (define-public r-fields (package (name "r-fields") - (version "12.5") + (version "13.3") (source (origin (method url-fetch) (uri (cran-uri "fields" version)) (sha256 - (base32 "08jfqlz42vq23h2yq279cs2rva9fadi4q6cmk4dvixrmyprx5xyk")))) + (base32 "1hs4k5a9hh0r5fsrnpnvs6wvf78xpjzj8a2j6643dsz73a5q6ln6")))) (build-system r-build-system) (propagated-inputs `(("r-maps" ,r-maps) -- cgit v1.2.3 From 02d42ac3b9f502a6e1927bf9c16b2298bb883216 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:22 +0100 Subject: gnu: r-longitudinal: Update to 1.1.13. * gnu/packages/cran.scm (r-longitudinal): Update to 1.1.13. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 0bcccfd8dd..5d79a44112 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -14628,14 +14628,14 @@ discovery rates.") (define-public r-longitudinal (package (name "r-longitudinal") - (version "1.1.12") + (version "1.1.13") (source (origin (method url-fetch) (uri (cran-uri "longitudinal" version)) (sha256 (base32 - "1d83ws28nxi3kw5lgd5n5y7865djq7ky72fw3ddi1fkkhg1r9y6l")))) + "046w3xbr535c5jyd68adv42a7limxp1mv57b5w6w673w707lmw2p")))) (build-system r-build-system) (propagated-inputs `(("r-corpcor" ,r-corpcor))) (home-page "http://strimmerlab.org/software/longitudinal/") -- cgit v1.2.3 From 6f2fc78a253fa7bebd3269ebbcd6c438d0589508 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:22 +0100 Subject: gnu: r-genenet: Update to 1.2.16. * gnu/packages/cran.scm (r-genenet): Update to 1.2.16. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 5d79a44112..e4404869a7 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -14650,14 +14650,14 @@ dynamical correlation and dynamical covariance.") (define-public r-genenet (package (name "r-genenet") - (version "1.2.15") + (version "1.2.16") (source (origin (method url-fetch) (uri (cran-uri "GeneNet" version)) (sha256 (base32 - "11ba6ahsk3x9alvcw8bai2bpg84ki1m8nadrjjdhjg65svhw8njm")))) + "1r1khga3nxxjghs4vnbymzp0cwb1q17zw2v3a94qz8fsrirq1sf1")))) (properties `((upstream-name . "GeneNet"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From 44c4c20195dcaa226274a49aa1a898e991d2fac5 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:23 +0100 Subject: gnu: r-parallelly: Update to 1.29.0. * gnu/packages/cran.scm (r-parallelly): Update to 1.29.0. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index e4404869a7..2359838405 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -14964,14 +14964,14 @@ them in distributed compute environments.") (define-public r-parallelly (package (name "r-parallelly") - (version "1.28.1") + (version "1.29.0") (source (origin (method url-fetch) (uri (cran-uri "parallelly" version)) (sha256 (base32 - "0qy6gj1xybiziks5gvw5px81n3klgr16kvb1qn1xp6j030xqibpl")))) + "0a84lr2jqqnvmdayb9v9kv7m8rffp65s4s1wcalr96sl3cxypyc7")))) (properties `((upstream-name . "parallelly"))) (build-system r-build-system) (home-page "https://github.com/HenrikBengtsson/parallelly") -- cgit v1.2.3 From e838804b9b8f4e593835fb2f8506999f7730b639 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:23 +0100 Subject: gnu: r-future: Update to 1.23.0. * gnu/packages/cran.scm (r-future): Update to 1.23.0. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 2359838405..ccdb901d42 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -14992,14 +14992,14 @@ port-forwarding to your local computer.") (define-public r-future (package (name "r-future") - (version "1.22.1") + (version "1.23.0") (source (origin (method url-fetch) (uri (cran-uri "future" version)) (sha256 (base32 - "1kgdpfipnwi15wz2xvlfg3bmq424hhjzja5bks01v3phra2lmcl7")))) + "1y5qzpsg0r2dccynyybbb2ngxbl1y3phs1dq2jj3f2bwhc7chsfq")))) (build-system r-build-system) (arguments `(#:phases -- cgit v1.2.3 From 464e650fa7dc74a10b2cd0d11e098f46076563a3 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:23 +0100 Subject: gnu: r-gamlss-dist: Update to 6.0-1. * gnu/packages/cran.scm (r-gamlss-dist): Update to 6.0-1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index ccdb901d42..11f2b15fb7 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -15465,13 +15465,13 @@ such software by imputing dropout events.") (define-public r-gamlss-dist (package (name "r-gamlss-dist") - (version "5.3-2") + (version "6.0-1") (source (origin (method url-fetch) (uri (cran-uri "gamlss.dist" version)) (sha256 - (base32 "1lyf2rvkplywgyhcni93k52z3b89vv86yrgl38dx3ln3436r5ahc")))) + (base32 "0m41n7zf7m0mh1w9ql70wqnzsf2f013ql699im7zmp6fdggb8qxm")))) (properties `((upstream-name . "gamlss.dist"))) (build-system r-build-system) (propagated-inputs `(("r-mass" ,r-mass))) -- cgit v1.2.3 From fa1fc897b6c07b94eff3d0b6ce5780cf5fdf5d01 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:23 +0100 Subject: gnu: r-pbdzmq: Update to 0.3-6. * gnu/packages/cran.scm (r-pbdzmq): Update to 0.3-6. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 11f2b15fb7..0bef699a7e 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -15863,14 +15863,14 @@ graphs.") (define-public r-pbdzmq (package (name "r-pbdzmq") - (version "0.3-5") + (version "0.3-6") (source (origin (method url-fetch) (uri (cran-uri "pbdZMQ" version)) (sha256 (base32 - "1v8iv1pzs4j3ics9k9h4xjkv6z1ma2xbqy003xk2lqax6srqi02d")))) + "0yy3x3l04vx13jbjbvkvsc8jdbf0abndjfknszdx3bi18b2chi4r")))) (properties `((upstream-name . "pbdZMQ"))) (build-system r-build-system) (inputs -- cgit v1.2.3 From e787bfbd94039737f8c8dcd5ac18a773aa887d3a Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:24 +0100 Subject: gnu: r-udunits2: Update to 0.13.1. * gnu/packages/cran.scm (r-udunits2): Update to 0.13.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 0bef699a7e..45775eef10 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -16442,14 +16442,14 @@ classes.") (define-public r-udunits2 (package (name "r-udunits2") - (version "0.13") + (version "0.13.1") (source (origin (method url-fetch) (uri (cran-uri "udunits2" version)) (sha256 (base32 - "0yav7rm2afcx67xqrknybxgz7x63w78zyxa0xifvc0k2gz0d6mfi")))) + "1l889f8iy8qaacxfs6ll62d6hs8g8qsr5ynn24grpvp8dk8l888w")))) (properties `((upstream-name . "udunits2"))) (build-system r-build-system) (inputs -- cgit v1.2.3 From aeeaee2363da61628988200209c132e35f3a7a45 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:24 +0100 Subject: gnu: r-sf: Update to 1.0-4. * gnu/packages/cran.scm (r-sf): Update to 1.0-4. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 45775eef10..a3ed3daca5 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -16624,14 +16624,14 @@ information about geometries.") (define-public r-sf (package (name "r-sf") - (version "1.0-3") + (version "1.0-4") (source (origin (method url-fetch) (uri (cran-uri "sf" version)) (sha256 (base32 - "1y1im0wxqx0vqas6ggmi6p1dyp98l895jy3asxky4vq5wpjfrqrf")))) + "0dxln3ikqmwczz0ri63xwj05v09hkpljw2qvma6n03nzczyg2713")))) (build-system r-build-system) (inputs `(("gdal" ,gdal) -- cgit v1.2.3 From 366e270d46647b02d6ff19193a607952d76edc5c Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:24 +0100 Subject: gnu: r-spdep: Update to 1.1-12. * gnu/packages/cran.scm (r-spdep): Update to 1.1-12. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index a3ed3daca5..373c570b92 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -16662,13 +16662,13 @@ datum transformations.") (define-public r-spdep (package (name "r-spdep") - (version "1.1-11") + (version "1.1-12") (source (origin (method url-fetch) (uri (cran-uri "spdep" version)) (sha256 (base32 - "1ym523dzpiji6c8ypa3gvw8va36gl1gnzcsvdg9drly3mlq42rpr")) + "1dykhsk5djh62b3zcvpmvm3s87rn8ywzbwblhzivhln0y6pzk9hv")) (snippet '(for-each delete-file '("inst/doc/nb_igraph.html" "inst/doc/nb_igraph.R" -- cgit v1.2.3 From c1d7ba16adc3c0e03c7c03f7764e1108192178b3 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:25 +0100 Subject: gnu: r-hierfstat: Update to 0.5-10. * gnu/packages/cran.scm (r-hierfstat): Update to 0.5-10. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 373c570b92..a75299f1ee 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -17207,14 +17207,14 @@ and a QP solver.") (define-public r-hierfstat (package (name "r-hierfstat") - (version "0.5-7") + (version "0.5-10") (source (origin (method url-fetch) (uri (cran-uri "hierfstat" version)) (sha256 (base32 - "0dp8k1z5a8gqnax99y1hwfvxilzf4n2i751zr0z6ihrzirsvb3m3")))) + "1p4vlna185sa3b5xjbysiqxcj9aa5s7dmxy41hg79vlqdivf874r")))) (build-system r-build-system) (propagated-inputs `(("r-ade4" ,r-ade4) -- cgit v1.2.3 From 7a2d963c2ce47e3452f10bec28d3b72982e73e7e Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:25 +0100 Subject: gnu: r-dae: Update to 3.2-13. * gnu/packages/cran.scm (r-dae): Update to 3.2-13. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index a75299f1ee..fabf8d25c6 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -19174,14 +19174,14 @@ classification and regression models.") (define-public r-dae (package (name "r-dae") - (version "3.2-11") + (version "3.2-13") (source (origin (method url-fetch) (uri (cran-uri "dae" version)) (sha256 (base32 - "0jrdfaw6aqv7k323yscsfpdkb3c4vi5ibncl6m96b9820pvycsz8")))) + "0mq94ah21p1glvsbvdmi2p7nlgz1bvq7w3rz2z3mdqq18kz6nkjw")))) (build-system r-build-system) (propagated-inputs `(("r-ggplot2" ,r-ggplot2) -- cgit v1.2.3 From 84e6f3ac0a29bed7c795c80ea80a64cad507c4b7 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:26 +0100 Subject: gnu: r-ggfortify: Update to 0.4.13. * gnu/packages/cran.scm (r-ggfortify): Update to 0.4.13. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index fabf8d25c6..dfbf3f6276 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -19291,14 +19291,14 @@ includes data sets from oceanography.") (define-public r-ggfortify (package (name "r-ggfortify") - (version "0.4.12") + (version "0.4.13") (source (origin (method url-fetch) (uri (cran-uri "ggfortify" version)) (sha256 (base32 - "13f3ggn94czw7xw5qxwrdncr2h7z7bvwgw8zxni8wkc8x3kbz5rd")))) + "0qls8pyndrlwx75wzlc0xmk04qq263d7065r3d6kvay7haa4nm40")))) (build-system r-build-system) (propagated-inputs `(("r-dplyr" ,r-dplyr) -- cgit v1.2.3 From 40badbd0c3d7d644c1f278cfeee0db8b2ed3fb89 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:26 +0100 Subject: gnu: r-xgboost: Update to 1.5.0.2. * gnu/packages/cran.scm (r-xgboost): Update to 1.5.0.2. [propagated-inputs]: Remove r-magrittr. --- gnu/packages/cran.scm | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index dfbf3f6276..860550b6a1 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -19388,19 +19388,18 @@ the current document.") (define-public r-xgboost (package (name "r-xgboost") - (version "1.4.1.1") + (version "1.5.0.2") (source (origin (method url-fetch) (uri (cran-uri "xgboost" version)) (sha256 (base32 - "1i706h6yhayzbqlqa1z6fgjc56kxm3isz0jw6d26fpyfjlw6z64z")))) + "04xbgrrb3aq067hrivslq5f2rd1v95yfv7lkj596ijyqi6ibjl27")))) (build-system r-build-system) (propagated-inputs `(("r-data-table" ,r-data-table) ("r-jsonlite" ,r-jsonlite) - ("r-magrittr" ,r-magrittr) ("r-matrix" ,r-matrix))) (native-inputs `(("r-knitr" ,r-knitr))) -- cgit v1.2.3 From 2703bf661cbabb8837960dc66a6cb51df548dec5 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:26 +0100 Subject: gnu: r-rhpcblasctl: Update to 0.21-247.1. * gnu/packages/cran.scm (r-rhpcblasctl): Update to 0.21-247.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 860550b6a1..a27288dad3 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -19538,14 +19538,14 @@ path of values for the regularization parameter.") (define-public r-rhpcblasctl (package (name "r-rhpcblasctl") - (version "0.21-247") + (version "0.21-247.1") (source (origin (method url-fetch) (uri (cran-uri "RhpcBLASctl" version)) (sha256 (base32 - "09276fpkj6xa0zpzzdckclj923b0xr0rhfjiiwfli3kyqi2m37v2")))) + "0scpr6jq25xx7wmqyc380ann4h536ll0g7wblikk25yqvpamzrav")))) (properties `((upstream-name . "RhpcBLASctl"))) (build-system r-build-system) (home-page "https://prs.ism.ac.jp/~nakama/Rhpc/") -- cgit v1.2.3 From 31b876b78ab4353cf50b547f47d74e53549e8ef6 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:27 +0100 Subject: gnu: r-graphlayouts: Update to 0.7.2. * gnu/packages/cran.scm (r-graphlayouts): Update to 0.7.2. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index a27288dad3..fb5c364f93 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -19842,14 +19842,14 @@ be used further by e.g. graphic devices.") (define-public r-graphlayouts (package (name "r-graphlayouts") - (version "0.7.1") + (version "0.7.2") (source (origin (method url-fetch) (uri (cran-uri "graphlayouts" version)) (sha256 (base32 - "05v7ss18bflhqa4ipsca8iw2ln8ddbaiyrizx2a5cwq81g5qq3rq")))) + "0vncg1pfnwrfkjfwz5k86b0ir8vnjkbyd0kzpbgb0cpkdz7987pc")))) (properties `((upstream-name . "graphlayouts"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From 73a5393cca47cb0054c0cf5a00983bc50764203f Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:27 +0100 Subject: gnu: r-terra: Update to 1.4-20. * gnu/packages/cran.scm (r-terra): Update to 1.4-20. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index fb5c364f93..0b02159aea 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -19869,14 +19869,14 @@ emphasize hidden group structures in networks or focus on specific nodes.") (define-public r-terra (package (name "r-terra") - (version "1.4-11") + (version "1.4-20") (source (origin (method url-fetch) (uri (cran-uri "terra" version)) (sha256 (base32 - "08gx28ad00adz4fqch3fx27s6yd0rpjhmdy6b83d1wnlzzgc13qa")))) + "0c4nx113sfympixy5rkvgzc7pprcfflnadkbwhcpzjlky8gmmsk4")))) (properties `((upstream-name . "terra"))) (build-system r-build-system) (inputs -- cgit v1.2.3 From 5c5b57268fd1062d66654f5169f14e51c0da91fe Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:27 +0100 Subject: gnu: r-rngwell: Update to 0.10-7. * gnu/packages/cran.scm (r-rngwell): Update to 0.10-7. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 0b02159aea..027faf8067 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -21144,14 +21144,14 @@ facilitates insertion into pipelines, and content inspection.") (define-public r-rngwell (package (name "r-rngwell") - (version "0.10-6") + (version "0.10-7") (source (origin (method url-fetch) (uri (cran-uri "rngWELL" version)) (sha256 (base32 - "0pjjcs9pqj7mf0mhb2cwd0aanqpwnm65bm86hk6mi2vw8rgnj2vv")))) + "0f1dxxaimfb0fww8ym9ciqf6q760ai46wxldl37m5mfpd57ca00c")))) (properties `((upstream-name . "rngWELL"))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/rngWELL/") -- cgit v1.2.3 From 247012703793c07ea12591a026546fc4ecb417e4 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:28 +0100 Subject: gnu: r-randtoolbox: Update to 1.31.1. * gnu/packages/cran.scm (r-randtoolbox): Update to 1.31.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 027faf8067..9a48beb2a2 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -21190,14 +21190,14 @@ and prints vectorized images.") (define-public r-randtoolbox (package (name "r-randtoolbox") - (version "1.30.1") + (version "1.31.1") (source (origin (method url-fetch) (uri (cran-uri "randtoolbox" version)) (sha256 (base32 - "0qg20ar6qns858jdzqhmfq7yji81czhr6cim257958gqpj66sn95")))) + "1b9vjzqg014hxp1vfb62m01d7xim5vmpbyxzlbll49bqas0jx69h")))) (properties `((upstream-name . "randtoolbox"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From db66ca71bc7b7b18858b053ffb034577e0d4c0d9 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:28 +0100 Subject: gnu: r-gamlss-data: Update to 6.0-2. * gnu/packages/cran.scm (r-gamlss-data): Update to 6.0-2. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 9a48beb2a2..bbecd85642 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -21336,14 +21336,14 @@ discussed in Reisen et al. (2017) @url{doi:10.1016/j.jspi.2017.02.008}.") (define-public r-gamlss-data (package (name "r-gamlss-data") - (version "6.0-1") + (version "6.0-2") (source (origin (method url-fetch) (uri (cran-uri "gamlss.data" version)) (sha256 (base32 - "1cjb2n5i5mnhmb5qbqycdbfg65j7nxb9s74yihqs9kpa39byrzcq")))) + "07mpdl4h9rwmnpl9jmsn6ig8ji11an6pyjfsvg62h2alapwbdcyv")))) (properties `((upstream-name . "gamlss.data"))) (build-system r-build-system) (home-page "http://www.gamlss.org/") -- cgit v1.2.3 From 9c4a767fef2ec9f23ed77c4807a81d0410c21c7f Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:28 +0100 Subject: gnu: r-fda: Update to 5.5.1. * gnu/packages/cran.scm (r-fda): Update to 5.5.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index bbecd85642..b6bd3182e8 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -22348,14 +22348,14 @@ variable observed over time.") (define-public r-fda (package (name "r-fda") - (version "5.4.0") + (version "5.5.1") (source (origin (method url-fetch) (uri (cran-uri "fda" version)) (sha256 (base32 - "000flssclb2c1sfm2czyp1qxrfrl9rp6bd8sw87ign8165maplqf")))) + "0fm2vswc8fdi2p1axby0hjwh8m6lc1zrdikrpiamilr6w9m2zanw")))) (properties `((upstream-name . "fda"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From 96c728cb7df33539a2283ee6501718424361806c Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:29 +0100 Subject: gnu: r-imager: Update to 0.42.11. * gnu/packages/cran.scm (r-imager): Update to 0.42.11. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index b6bd3182e8..42ab4d80e2 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -22667,14 +22667,14 @@ number embedded in the file rather than the file extension.") (define-public r-imager (package (name "r-imager") - (version "0.42.10") + (version "0.42.11") (source (origin (method url-fetch) (uri (cran-uri "imager" version)) (sha256 (base32 - "1vmfmmawbk8sgyba87igaxpwb926nb1ji8a08ad3dqfj7aq9x4q1")))) + "1a1jhmgrpv1d0fk14axj88qvxgb25bqnj65d60g1k985ipzvgy27")))) (properties `((upstream-name . "imager"))) (build-system r-build-system) (inputs -- cgit v1.2.3 From 629132d4964ca1b104e82d256d34765609418c55 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:29 +0100 Subject: gnu: r-proxyc: Update to 0.2.3. * gnu/packages/cran.scm (r-proxyc): Update to 0.2.3. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 42ab4d80e2..f0577d8388 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -23747,14 +23747,14 @@ programming} (OOP) using R Reference Class.") (define-public r-proxyc (package (name "r-proxyc") - (version "0.2.1") + (version "0.2.3") (source (origin (method url-fetch) (uri (cran-uri "proxyC" version)) (sha256 (base32 - "1j8zsxdnpi8bywd7hhm47icgl1jhfyd8myj78bqgk7warai6m3iq")))) + "1g90d82rp82dkidlfykankprzpp94d7394s2b2qjlyiia3k0hlb3")))) (properties `((upstream-name . "proxyC"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From 68807bdeaa46e2bc0b4d98824444eda1c346aa13 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:29 +0100 Subject: gnu: r-stopwords: Update to 2.3. * gnu/packages/cran.scm (r-stopwords): Update to 2.3. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index f0577d8388..0f0c6134f7 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -23797,14 +23797,14 @@ character codes as well as the UN M.49 area codes.") (define-public r-stopwords (package (name "r-stopwords") - (version "2.2") + (version "2.3") (source (origin (method url-fetch) (uri (cran-uri "stopwords" version)) (sha256 (base32 - "1f862y30c4r0phamlp7shzkpxg0vh3i410xy0336w310hv3wqsxn")))) + "1ci1cgxrcvlhhplximsfv0plvjdbcd5kv0nphxnpildsn5m1rv65")))) (properties `((upstream-name . "stopwords"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From 823115c7f7789563acb9502bf9a8a49d691e953e Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:30 +0100 Subject: gnu: r-rsconnect: Update to 0.8.25. * gnu/packages/cran.scm (r-rsconnect): Update to 0.8.25. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 0f0c6134f7..537935e0f3 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -24671,14 +24671,14 @@ and reproducible way.") (define-public r-rsconnect (package (name "r-rsconnect") - (version "0.8.24") + (version "0.8.25") (source (origin (method url-fetch) (uri (cran-uri "rsconnect" version)) (sha256 (base32 - "19p4w9dmhsl1vdvwv3hfmd5qzf4296g0x878idfajvrx0wgfysyg")))) + "1kyr4v7vds2yw3xmkk2yr56ylz1h95944brylwvwmwj5yxvm419w")))) (properties `((upstream-name . "rsconnect"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From f990587ba18604c1d676a90375c4d22a7fb9d8f8 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:30 +0100 Subject: gnu: r-argon2: Update to 0.4-0. * gnu/packages/cran.scm (r-argon2): Update to 0.4-0. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 537935e0f3..67ab1b07f9 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -25375,14 +25375,14 @@ service. Functions are provided to work with the OAI-PMH verbs: (define-public r-argon2 (package (name "r-argon2") - (version "0.2-0") + (version "0.4-0") (source (origin (method url-fetch) (uri (cran-uri "argon2" version)) (sha256 (base32 - "0kqn06rpb39jlzizjlnc5c44mfic8llrshxn7ljgmyj35lbqwxqh")))) + "09hzl0wz0lw2v7g64rdv0lij2hq36zl37a6rmxwvinmjdzijcsyw")))) (properties `((upstream-name . "argon2"))) (build-system r-build-system) (home-page "https://github.com/wrathematics/argon2") -- cgit v1.2.3 From 609135a5f424371c93f41fc5b5cfa01618d44eda Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:30 +0100 Subject: gnu: r-rcdd: Update to 1.5. * gnu/packages/cran.scm (r-rcdd): Update to 1.5. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 67ab1b07f9..e93f689fab 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -25713,14 +25713,14 @@ Mean Test, Durbin-Watson statistic etc.") (define-public r-rcdd (package (name "r-rcdd") - (version "1.4") + (version "1.5") (source (origin (method url-fetch) (uri (cran-uri "rcdd" version)) (sha256 (base32 - "02jj1lpk4kvjh5484lbdrdlx2ffk9qdxys7afyakd5kl6swqalz2")))) + "0zxx0qvv26ba30jkm8mvca4h59rqklay4jwazpcw7h9dzp4189jr")))) (properties `((upstream-name . "rcdd"))) (build-system r-build-system) -- cgit v1.2.3 From 1d3dce75396b987e4f7cfdce5cda3969cc2604ff Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:31 +0100 Subject: gnu: r-mstate: Update to 0.3.2. * gnu/packages/cran.scm (r-mstate): Update to 0.3.2. [propagated-inputs]: Remove r-magrittr and r-viridis; add r-viridislite. --- gnu/packages/cran.scm | 7 +++---- 1 file changed, 3 insertions(+), 4 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index e93f689fab..5978e8b01e 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -26045,24 +26045,23 @@ with posterior predictive checks and leave-one-out cross-validation.") (define-public r-mstate (package (name "r-mstate") - (version "0.3.1") + (version "0.3.2") (source (origin (method url-fetch) (uri (cran-uri "mstate" version)) (sha256 (base32 - "11i3p7fph8nbnfis1m7rdrq32qryaajv2wrkxk1x6k17zkh4rq6i")))) + "054dzrd5b0xjjjl7862q3aq1jwgrxbkqz7zpvbdirqsld3zksirw")))) (properties `((upstream-name . "mstate"))) (build-system r-build-system) (propagated-inputs `(("r-data-table" ,r-data-table) ("r-lattice" ,r-lattice) - ("r-magrittr" ,r-magrittr) ("r-rcolorbrewer" ,r-rcolorbrewer) ("r-rlang" ,r-rlang) ("r-survival" ,r-survival) - ("r-viridis" ,r-viridis))) + ("r-viridislite" ,r-viridislite))) (native-inputs `(("r-knitr" ,r-knitr))) (home-page -- cgit v1.2.3 From d64159fa48f3130aa07d7125f80950d4651ee587 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:31 +0100 Subject: gnu: r-lightgbm: Update to 3.3.1. * gnu/packages/cran.scm (r-lightgbm): Update to 3.3.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 5978e8b01e..9fa472f23b 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -26281,14 +26281,14 @@ input.") (define-public r-lightgbm (package (name "r-lightgbm") - (version "3.3.0") + (version "3.3.1") (source (origin (method url-fetch) (uri (cran-uri "lightgbm" version)) (sha256 (base32 - "1sgimzax84rag02gqv2qag2cg8mmhkv71xydawg7bkxk95dycbc2")))) + "0hvpwirskzcd7ww47f9gllgl3wjvpghnwj8a41glpppwwaaxa0z4")))) (properties `((upstream-name . "lightgbm"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From 3b4c4f69b03b24fd9cd65b2b7c0b55c4b5bbb4c4 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:31 +0100 Subject: gnu: r-conquer: Update to 1.2.1. * gnu/packages/cran.scm (r-conquer): Update to 1.2.1. [propagated-inputs]: Add r-caret. --- gnu/packages/cran.scm | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 9fa472f23b..64f13d7d80 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -26503,18 +26503,19 @@ you can automate browsers locally or remotely.") (define-public r-conquer (package (name "r-conquer") - (version "1.0.2") + (version "1.2.1") (source (origin (method url-fetch) (uri (cran-uri "conquer" version)) (sha256 (base32 - "1zvlsrbmrij011mcdi3qngs1al2lhrdiyknxnk0w1zhzrra62bsl")))) + "0i9g27f52zl2kb2392g0y614drf6s87dqz12aphj889ajq7zjm0k")))) (properties `((upstream-name . "conquer"))) (build-system r-build-system) (propagated-inputs - `(("r-matrix" ,r-matrix) + `(("r-caret" ,r-caret) + ("r-matrix" ,r-matrix) ("r-matrixstats" ,r-matrixstats) ("r-rcpp" ,r-rcpp) ("r-rcpparmadillo" ,r-rcpparmadillo))) -- cgit v1.2.3 From 0b9ee4f2b938db0b0cd407f3d0bd881589b03d55 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:32 +0100 Subject: gnu: r-spatstat-core: Update to 2.3-1. * gnu/packages/cran.scm (r-spatstat-core): Update to 2.3-1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 64f13d7d80..9b84786e2d 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -26791,14 +26791,14 @@ for the geometry of linear networks.") (define-public r-spatstat-core (package (name "r-spatstat-core") - (version "2.3-0") + (version "2.3-1") (source (origin (method url-fetch) (uri (cran-uri "spatstat.core" version)) (sha256 (base32 - "1j962lzllqzxkd57j6immyj94pc53ff9mlvw1iscw7cnn9nyr5ap")))) + "1fq6ynds66d836drf758syqhfz0341fxif0r5hbf5lfkwp3a2wfk")))) (properties `((upstream-name . "spatstat.core"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From abdc8da973d9675df9540bc6eba9f481fcee924d Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:32 +0100 Subject: gnu: r-cpp11: Update to 0.4.1. * gnu/packages/cran.scm (r-cpp11): Update to 0.4.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 9b84786e2d..46569f8902 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -26912,14 +26912,14 @@ for linear mixed models (AIREML).") (define-public r-cpp11 (package (name "r-cpp11") - (version "0.4.0") + (version "0.4.1") (source (origin (method url-fetch) (uri (cran-uri "cpp11" version)) (sha256 (base32 - "11qyliiw2qrac56mq5h9v7gy3dvwjj1i26pvygwbpprhvh3zss0p")))) + "1nk47xkab7i17h7917l4cfyfvnxf782dfq67wwxa6n0r4jqqxzz9")))) (properties `((upstream-name . "cpp11"))) (build-system r-build-system) (native-inputs `(("r-knitr" ,r-knitr))) -- cgit v1.2.3 From 75010a0c747b1394e4853d58d051db9f73a515bd Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:33 +0100 Subject: gnu: r-igraph: Update to 1.2.8. * gnu/packages/cran.scm (r-igraph): Update to 1.2.8. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 46569f8902..27b62b2582 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -27541,14 +27541,14 @@ model.") (define-public r-igraph (package (name "r-igraph") - (version "1.2.7") + (version "1.2.8") (source (origin (method url-fetch) (uri (cran-uri "igraph" version)) (sha256 (base32 - "1r8vmqm2rq1jnkh8axr4gw1hbj34ca1dil154qp037imfcra1h95")))) + "01hvphaf5mx9xvwiazcw39kp6gc1lafqrbjwczy6f7hr145dn1pl")))) (build-system r-build-system) (native-inputs `(("gfortran" ,gfortran))) -- cgit v1.2.3 From 2952b0140e6625ac12207f1f094e783d96b52dd4 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:33 +0100 Subject: gnu: r-rsample: Update to 0.1.1. * gnu/packages/cran.scm (r-rsample): Update to 0.1.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 27b62b2582..8578aedf6a 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -27753,14 +27753,14 @@ sliding windows are to be created.") (define-public r-rsample (package (name "r-rsample") - (version "0.1.0") + (version "0.1.1") (source (origin (method url-fetch) (uri (cran-uri "rsample" version)) (sha256 (base32 - "00w8r0p499fm8cyw297gznr83mbgy9a3znzpbgj0zq9dry1a266b")))) + "01xwhj4zfvxbv9cjb6mbz3aphxqc3cnjjx1xy2yx2wd94fbka42z")))) (properties `((upstream-name . "rsample"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From e08ba047549dbaf2e008bdd0911c81ebaf1b18f2 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:33 +0100 Subject: gnu: r-seqminer: Update to 8.2. * gnu/packages/cran.scm (r-seqminer): Update to 8.2. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 8578aedf6a..00c0ad5780 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -28489,14 +28489,14 @@ designs. Broman et al. (2018) .") (define-public r-seqminer (package (name "r-seqminer") - (version "8.0") + (version "8.2") (source (origin (method url-fetch) (uri (cran-uri "seqminer" version)) (sha256 (base32 - "00jzj8mwb0zaiwlifd41b26mrq9mzigj18nc29dydi0r42hxg16i")))) + "097313x72jr2q6dp8ma33w8kyp3gfw71snf1qx2maxbwwnysk085")))) (build-system r-build-system) (inputs `(("zlib" ,zlib))) -- cgit v1.2.3 From 4e1bf3b361b9d0f02ff6b118a377761686a0ea35 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:33 +0100 Subject: gnu: r-seuratobject: Update to 4.0.3. * gnu/packages/cran.scm (r-seuratobject): Update to 4.0.3. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 00c0ad5780..b0fc270fd3 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -28562,14 +28562,14 @@ data to rasters. It speeds up plotting of data with millions of points.") (define-public r-seuratobject (package (name "r-seuratobject") - (version "4.0.2") + (version "4.0.3") (source (origin (method url-fetch) (uri (cran-uri "SeuratObject" version)) (sha256 (base32 - "076bd6xmpnspnz7raw03mfgknnygx79sj3c9q6yhpanc46i9gvk4")))) + "06gch6416hmwpfxa7bidw5izfp4yvkdka7mvxp6grmldnj5iqm6g")))) (properties `((upstream-name . "SeuratObject"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From 9fbbdd2dfef17afa0d9e282a35d20879d9ac2db2 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:34 +0100 Subject: gnu: r-phangorn: Update to 2.8.0. * gnu/packages/cran.scm (r-phangorn): Update to 2.8.0. [propagated-inputs]: Remove r-magrittr. --- gnu/packages/cran.scm | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index b0fc270fd3..bce7514563 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -28700,20 +28700,19 @@ goal of enhancing interoperability between Seurat and Scanpy.") (define-public r-phangorn (package (name "r-phangorn") - (version "2.7.1") + (version "2.8.0") (source (origin (method url-fetch) (uri (cran-uri "phangorn" version)) (sha256 (base32 - "160kks4bg4iwy8g234g6aiiqbvz7ki5k9csyax3kjv7ia5wddafq")))) + "1pg5lfc5m4ccphswbfbihj91ppmqhf4084kbjlmfsrqxylsyy8ch")))) (build-system r-build-system) (propagated-inputs `(("r-ape" ,r-ape) ("r-fastmatch" ,r-fastmatch) ("r-igraph" ,r-igraph) - ("r-magrittr" ,r-magrittr) ("r-matrix" ,r-matrix) ("r-quadprog" ,r-quadprog) ("r-rcpp" ,r-rcpp))) -- cgit v1.2.3 From 4e5a7055cf0fa3ad87bf9b352fd7d5eea185d7c8 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:34 +0100 Subject: gnu: r-mlr3misc: Update to 0.9.5. * gnu/packages/cran.scm (r-mlr3misc): Update to 0.9.5. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index bce7514563..41718ec722 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -28997,13 +28997,13 @@ are.") (define-public r-mlr3misc (package (name "r-mlr3misc") - (version "0.9.4") + (version "0.9.5") (source (origin (method url-fetch) (uri (cran-uri "mlr3misc" version)) (sha256 (base32 - "14lcpvxrrl68l3khmy5r266b7yjjlg97pz4xvha0ypx8hlpbqik2")))) + "1ax1mvnm8xjcskq12x63jkal766v1zwilpgrkdv6yawd7yrww4q9")))) (build-system r-build-system) (propagated-inputs `(("r-backports" ,r-backports) -- cgit v1.2.3 From 07d00d5f44b36bf1a02fbbaa71dd072c1d1777f6 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:35 +0100 Subject: gnu: r-mlr3: Update to 0.13.0. * gnu/packages/cran.scm (r-mlr3): Update to 0.13.0. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 41718ec722..73e411a98f 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -29048,13 +29048,13 @@ implemented as @code{R6} classes.") (define-public r-mlr3 (package (name "r-mlr3") - (version "0.12.0") + (version "0.13.0") (source (origin (method url-fetch) (uri (cran-uri "mlr3" version)) (sha256 (base32 - "0nimwczsgrj29r9qrlz32qc3fkj02369zql7jhkrn3lk3mfy5zmz")))) + "1729wbdp62cjjk775qxrahyskp191s9qqnmqbxncfjrpdxphxk34")))) (build-system r-build-system) (propagated-inputs `(("r-r6" ,r-r6) -- cgit v1.2.3 From fa243bc07a28cbfab6e83792b68a76421ec35a32 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:35 +0100 Subject: gnu: r-mlr3learners: Update to 0.5.1. * gnu/packages/cran.scm (r-mlr3learners): Update to 0.5.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 73e411a98f..d3ab8216c3 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -29084,13 +29084,13 @@ computational operations, add-on packages provide additional functionality.") (define-public r-mlr3learners (package (name "r-mlr3learners") - (version "0.5.0") + (version "0.5.1") (source (origin (method url-fetch) (uri (cran-uri "mlr3learners" version)) (sha256 (base32 - "1gkbbn5ah2iv4pv5q2jf4lrqkga744d4y9jlyhyjqf0x75y9wkg2")))) + "1yc3mrk1b9h1k342wnw7sm4zmcw7w31l5ybh558g88f5hmibdl98")))) (build-system r-build-system) (propagated-inputs `(("r-checkmate" ,r-checkmate) -- cgit v1.2.3 From 49e51a77264e430e2649277e2146b020543c2591 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:35 +0100 Subject: gnu: r-clustree: Update to 0.4.4. * gnu/packages/cran.scm (r-clustree): Update to 0.4.4. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index d3ab8216c3..7eeb3eb25c 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -29373,14 +29373,14 @@ chunks.") (define-public r-clustree (package (name "r-clustree") - (version "0.4.3") + (version "0.4.4") (source (origin (method url-fetch) (uri (cran-uri "clustree" version)) (sha256 (base32 - "0lxydy2f83qqd5dhlp2l546jax759l43b29j6g82079yzg1szwsz")))) + "0vwmicajl7c0rmjdmf4f857fii0xrxz25vjkn888svlsikw00qbs")))) (properties `((upstream-name . "clustree"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From d541a9a37fba2daf117e009324d57ffb41e4c3a6 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:36 +0100 Subject: gnu: r-ragg: Update to 1.2.0. * gnu/packages/cran.scm (r-ragg): Update to 1.2.0. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 7eeb3eb25c..61033ae15b 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -29441,14 +29441,14 @@ the font tool-set provided by the @code{systemfonts} package.") (define-public r-ragg (package (name "r-ragg") - (version "1.1.3") + (version "1.2.0") (source (origin (method url-fetch) (uri (cran-uri "ragg" version)) (sha256 (base32 - "0ppypfq1vipwjngmiwdx1sj6x7m41v3dlnbsixdlnrf2nx82kxb2")))) + "1wbk7vny8435ii3aak586imd0dgh4ri55kqypx5b10x6ygp32avb")))) (properties `((upstream-name . "ragg"))) (build-system r-build-system) (inputs -- cgit v1.2.3 From 6b6264eca436cdcc56b60dc7671fc96dec11cf12 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:36 +0100 Subject: gnu: r-downlit: Update to 0.4.0. * gnu/packages/cran.scm (r-downlit): Update to 0.4.0. [propagated-inputs]: Add r-desc and r-memoise. --- gnu/packages/cran.scm | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 61033ae15b..8fd042ccf7 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -29474,21 +29474,23 @@ AGG to use as alternative to the raster devices provided through the (define-public r-downlit (package (name "r-downlit") - (version "0.2.1") + (version "0.4.0") (source (origin (method url-fetch) (uri (cran-uri "downlit" version)) (sha256 (base32 - "0z4fz7c9kyd9v72wl3iqs2wxspi975d6b0rgjr9lvg8a18maa9z6")))) + "10zvrqdpwavdy97h3q26bqh3k63z61fmc04w9vwsnvmnv8hnh3vl")))) (properties `((upstream-name . "downlit"))) (build-system r-build-system) (propagated-inputs `(("r-brio" ,r-brio) + ("r-desc" ,r-desc) ("r-digest" ,r-digest) ("r-evaluate" ,r-evaluate) ("r-fansi" ,r-fansi) + ("r-memoise" ,r-memoise) ("r-rlang" ,r-rlang) ("r-vctrs" ,r-vctrs) ("r-yaml" ,r-yaml))) -- cgit v1.2.3 From fb0f3ccce7cbc8b3f45c9e57258e4439b65be877 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:37 +0100 Subject: gnu: r-stars: Update to 0.5-4. * gnu/packages/cran.scm (r-stars): Update to 0.5-4. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 8fd042ccf7..76f732f668 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -30142,14 +30142,14 @@ light-weight geometry library used by @url{http://postgis.net/,PostGIS}.") (define-public r-stars (package (name "r-stars") - (version "0.5-3") + (version "0.5-4") (source (origin (method url-fetch) (uri (cran-uri "stars" version)) (sha256 (base32 - "00cljaz98iy3wymabp7b47qgxdybg9jgjkw7q6da1ginmy14m524")))) + "1h5fway2fk637mkglw0h3ajiyyx8saqcapg42xzsiwbk8lnaf9f4")))) (properties `((upstream-name . "stars"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From 4540c62a2441ccb328eb00278123b95d4abae6e0 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:37 +0100 Subject: gnu: r-tzdb: Update to 0.2.0. * gnu/packages/cran.scm (r-tzdb): Update to 0.2.0. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 76f732f668..a96061ba23 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -30635,14 +30635,14 @@ in order to customise how it should change with time.") (define-public r-tzdb (package (name "r-tzdb") - (version "0.1.2") + (version "0.2.0") (source (origin (method url-fetch) (uri (cran-uri "tzdb" version)) (sha256 (base32 - "1sl8nacx2i1h9vcvggiyzwd2zwvgrvfvsv3xa9072br62gkpay2c")))) + "1afmav7s29fb5cd920h6vrzg9cvc4jsidfalxpvhlh1b8mfr0df3")))) (properties `((upstream-name . "tzdb"))) (build-system r-build-system) (propagated-inputs `(("r-cpp11" ,r-cpp11))) -- cgit v1.2.3 From 049fb4da7f4f50c53c5d163b204316391e507159 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:37 +0100 Subject: gnu: r-vroom: Update to 1.5.6. * gnu/packages/cran.scm (r-vroom): Update to 1.5.6. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index a96061ba23..06262bdba1 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -30663,14 +30663,14 @@ time zone manipulations.") (define-public r-vroom (package (name "r-vroom") - (version "1.5.5") + (version "1.5.6") (source (origin (method url-fetch) (uri (cran-uri "vroom" version)) (sha256 (base32 - "1zk5nk9y64lspwhsasb7d2yg8i6ihyg2slys1qqa6qpi1266hi8x")))) + "0b1lbi20gadwjwinw1v0az4g0y79vlcqfqyblphls601h3nnmn3p")))) (properties `((upstream-name . "vroom"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From 7c2e3bb288c842b9828abdbe7a4b486b724217f8 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:38 +0100 Subject: gnu: r-qs: Update to 0.25.1.1. * gnu/packages/cran.scm (r-qs): Update to 0.25.1.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 06262bdba1..03041fbcba 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -30902,14 +30902,14 @@ package.") (define-public r-qs (package (name "r-qs") - (version "0.25.1") + (version "0.25.1.1") (source (origin (method url-fetch) (uri (cran-uri "qs" version)) (sha256 (base32 - "0qzrhc5jsygj813k956b00h4b6haynz44rk6a4v34fv4ywq9ba7w")))) + "077i181vh0izvsdy2d4366yir0ajg531g6d1s7ab044ssbphg38x")))) (properties `((upstream-name . "qs"))) (build-system r-build-system) (inputs `(("zlib" ,zlib))) -- cgit v1.2.3 From 7ee06c2b79a346f7e5af55629e52476d3e41fb9c Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:38 +0100 Subject: gnu: r-tensorflow: Update to 2.7.0. * gnu/packages/cran.scm (r-tensorflow): Update to 2.7.0. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 03041fbcba..82590269e6 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -31012,14 +31012,14 @@ Tensorflow graphs.") (define-public r-tensorflow (package (name "r-tensorflow") - (version "2.6.0") + (version "2.7.0") (source (origin (method url-fetch) (uri (cran-uri "tensorflow" version)) (sha256 (base32 - "1lkzxc3b5gkcg4hwqr57cysplcba6ff44qz8lbvk19kxnrhjaf9g")))) + "0xgm8jb1hl8564vviqys3aqwzvfbh0d43m154cj07j9spdz306ng")))) (properties `((upstream-name . "tensorflow"))) (build-system r-build-system) (inputs `(("tensorflow" ,tensorflow))) -- cgit v1.2.3 From d814232f89ddc59961c949763b6e64da173945e1 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:38 +0100 Subject: gnu: r-keras: Update to 2.7.0. * gnu/packages/cran.scm (r-keras): Update to 2.7.0. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 82590269e6..44f8caa089 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -31043,14 +31043,14 @@ between them.") (define-public r-keras (package (name "r-keras") - (version "2.6.1") + (version "2.7.0") (source (origin (method url-fetch) (uri (cran-uri "keras" version)) (sha256 (base32 - "0xg4n9sp1pf2yfbba3lb3fzr5gbdwlhv4j1h5njfqmjy5984b8ij")))) + "004z9aajc0b7lw7g68ri7ndabdwbylmnlyvmziljmm29z6fzk8y5")))) (properties `((upstream-name . "keras"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From b1010b9525d7606729ecb587354dc03573b4d8e5 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:38 +0100 Subject: gnu: r-ztree: Update to 1.0.7. * gnu/packages/cran.scm (r-ztree): Update to 1.0.7. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 44f8caa089..098e0d6002 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -31105,14 +31105,14 @@ files, images, movie formats, etc., etc.) through an R session.") (define-public r-ztree (package (name "r-ztree") - (version "1.0.6") + (version "1.0.7") (source (origin (method url-fetch) (uri (cran-uri "zTree" version)) (sha256 (base32 - "1mywxrx6bw7dzhrdwyxbjzc8ikgvw423zycyji0jjr69cfhpmywv")))) + "005zk6wpchpss6865ki35yawgf668pn70163ah97rnfkhfaswm6y")))) (properties `((upstream-name . "zTree"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From cd7d9611779f74eab2fce0cc11ddacf5d28e6b23 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 23 Nov 2021 15:23:39 +0100 Subject: gnu: r-paws-common: Update to 0.3.14. * gnu/packages/cran.scm (r-paws-common): Update to 0.3.14. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 098e0d6002..1c47cb6ac0 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -31323,14 +31323,14 @@ fully reproducible.") (define-public r-paws-common (package (name "r-paws-common") - (version "0.3.13") + (version "0.3.14") (source (origin (method url-fetch) (uri (cran-uri "paws.common" version)) (sha256 (base32 - "15sj7yw4hj76minr00xhgzkg1rwb7gsr2ib9q4d053i5f3jcy54a")))) + "013yiki3bjx0np577wy17ikfxdr2hiv6sd10anv281r108kldm1x")))) (properties `((upstream-name . "paws.common"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From c8005b63fa092a6177a0fab1125760ec698da03b Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Wed, 24 Nov 2021 16:36:54 +0100 Subject: gnu: Add r-astsa. * gnu/packages/cran.scm (r-astsa): New variable. --- gnu/packages/cran.scm | 23 +++++++++++++++++++++++ 1 file changed, 23 insertions(+) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 1c47cb6ac0..bfa43d0b9e 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -1171,6 +1171,29 @@ for credentials or a passphrase, for example to authenticate with a server or read a protected key.") (license license:expat))) +(define-public r-astsa + (package + (name "r-astsa") + (version "1.14") + (source + (origin + (method url-fetch) + (uri (cran-uri "astsa" version)) + (sha256 + (base32 "09zx2q419p0b1c336ybh4i62v5dvn3sp39dxn5kwlrqchjj7f5z6")))) + (properties `((upstream-name . "astsa"))) + (build-system r-build-system) + (home-page "https://github.com/nickpoison/astsa/") + (synopsis "Applied statistical time series analysis") + (description + "This package provides data sets and scripts to accompany Time Series +Analysis and Its Applications: With R Examples (4th ed), by R.H. Shumway and +D.S. Stoffer. Springer Texts in Statistics, 2017, +@url{https://doi.org/10.1007/978-3-319-52452-8}, and Time Series: A Data +Analysis Approach Using R. Chapman-Hall, 2019, +@url{https://doi.org/10.1201/9780429273285}.") + (license license:gpl3))) + (define-public r-vegan (package (name "r-vegan") -- cgit v1.2.3 From fefdea2a1ae1534ccc7011f2d2ac6ed0ab2925e8 Mon Sep 17 00:00:00 2001 From: Mădălin Ionel Patrașcu Date: Sat, 30 Oct 2021 17:55:04 +0200 Subject: gnu: Add r-alluvial. * gnu/packages/cran.scm (r-alluvial): New variable. Signed-off-by: Ricardo Wurmus --- gnu/packages/cran.scm | 20 ++++++++++++++++++++ 1 file changed, 20 insertions(+) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index bfa43d0b9e..9935b96067 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -7121,6 +7121,26 @@ a candidate list, using several criteria. The blocking can be done when whole and within plot factors interact.") (license license:gpl2+))) +(define-public r-alluvial + (package + (name "r-alluvial") + (version "0.1-2") + (source + (origin + (method url-fetch) + (uri (cran-uri "alluvial" version)) + (sha256 + (base32 "039frwrsxq1lb97s7vf2vbyyadimkigs628ymym06fxka53drdkp")))) + (properties `((upstream-name . "alluvial"))) + (build-system r-build-system) + (native-inputs `(("r-knitr" ,r-knitr))) + (home-page "https://github.com/mbojan/alluvial") + (synopsis "Create parallel sets plots (Alluvial Diagrams)") + (description + "This package creates alluvial diagrams (also known as parallel sets +plots) for multivariate and time series-like data.") + (license license:expat))) + (define-public r-signal (package (name "r-signal") -- cgit v1.2.3 From 78f2fe7da803ae9e1721b4a3f25271dfb490f4fb Mon Sep 17 00:00:00 2001 From: Hong Li Date: Tue, 30 Nov 2021 08:55:28 +0100 Subject: gnu: r-crul: Update to 1.2.0. * gnu/packages/cran.scm (r-crul): Update to 1.2.0. Signed-off-by: Ricardo Wurmus --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 9935b96067..04afeec953 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -32014,14 +32014,14 @@ convert dates to MMWR day, week, and year and the reverse.") (define-public r-crul (package (name "r-crul") - (version "1.1.0") + (version "1.2.0") (source (origin (method url-fetch) (uri (cran-uri "crul" version)) (sha256 (base32 - "1kjsc5gkx5k5cfwlfjp2cjm9cdzq2l1m68bnrjmahw3lkz8wzdph")))) + "133g0skz4lifl8hm8pqdryd2m2drbrm6mdfzbbsrw8fg46di86my")))) (properties `((upstream-name . "crul"))) (build-system r-build-system) (propagated-inputs -- cgit v1.2.3 From 21bf500ee95d985c99ab28bbf2a83c30c75763b2 Mon Sep 17 00:00:00 2001 From: "Hong.Li@mdc-berlin.de" Date: Mon, 29 Nov 2021 23:53:22 +0000 Subject: gnu: Add r-gistr. * gnu/packages/cran.scm (r-gistr): New variable. --- gnu/packages/cran.scm | 33 +++++++++++++++++++++++++++++++++ 1 file changed, 33 insertions(+) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 04afeec953..c10e3f9ecb 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -32040,6 +32040,39 @@ requests, and mocking HTTP requests. The package is built on R6, and takes inspiration from Ruby's @code{faraday} gem.") (license license:expat))) +(define-public r-gistr + (package + (name "r-gistr") + (version "0.9.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "gistr" version)) + (sha256 + (base32 + "0ac9ikrdg6i8xvlma0gizvsdva46408lk7hvsgkqirhy2ljy02hp")))) + (properties `((upstream-name . "gistr"))) + (build-system r-build-system) + (propagated-inputs + `(("r-assertthat" ,r-assertthat) + ("r-crul" ,r-crul) + ("r-dplyr" ,r-dplyr) + ("r-httr" ,r-httr) + ("r-jsonlite" ,r-jsonlite) + ("r-knitr" ,r-knitr) + ("r-magrittr" ,r-magrittr) + ("r-rmarkdown" ,r-rmarkdown))) + (native-inputs `(("r-knitr" ,r-knitr))) + (home-page "https://github.com/ropensci/gistr") + (synopsis "Work with Gists in browser") + (description + "This package allows the user to create new Github gists, update gists +with new files, rename files, delete files, get and delete gists, star and +un-star them, fork them, open a gist in your default browser, get an embed +code for a gist, list gist commits, and get rate limit information when +authenticated.") + (license license:expat))) + (define-public r-fauxpas (package (name "r-fauxpas") -- cgit v1.2.3 From 5bdf1b655117f4d7b8071ed08366157b0f655122 Mon Sep 17 00:00:00 2001 From: "Hong.Li@mdc-berlin.de" Date: Mon, 29 Nov 2021 23:53:55 +0000 Subject: gnu: Add r-rbokeh. * gnu/packages/cran.scm (r-rbokeh): New variable. Co-authored-by: Ricardo Wurmus --- gnu/packages/cran.scm | 71 +++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 71 insertions(+) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index c10e3f9ecb..504da4e3da 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -32073,6 +32073,77 @@ code for a gist, list gist commits, and get rate limit information when authenticated.") (license license:expat))) +(define-public r-rbokeh + (package + (name "r-rbokeh") + (version "0.5.2") + (source + (origin + (method url-fetch) + (uri (cran-uri "rbokeh" version)) + (sha256 + (base32 + "1h2fpzqf17pw9d09r1g1iyxsj5qma4fsk8vnar7f1z4fjyypvi6q")) + (snippet + '(for-each delete-file '("inst/htmlwidgets/lib/bokehjs/bokeh-widgets.min.js" + "inst/htmlwidgets/lib/bokehjs/bokeh.min.js"))))) + (properties `((upstream-name . "rbokeh"))) + (build-system r-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'process-javascript + (lambda* (#:key inputs #:allow-other-keys) + (with-directory-excursion "inst/htmlwidgets/lib/bokehjs" + (let ((mapping + `((,(assoc-ref inputs "js-bokeh-widgets") + . "bokeh-widgets.min.js") + (,(assoc-ref inputs "js-bokeh") + . "bokeh.min.js")))) + (for-each (lambda (source target) + (format #true "Processing ~a --> ~a~%" + source target) + (invoke "esbuild" source "--minify" + (string-append "--outfile=" target))) + (map car mapping) + (map cdr mapping))))))))) + (propagated-inputs + `(("r-digest" ,r-digest) + ("r-gistr" ,r-gistr) + ("r-hexbin" ,r-hexbin) + ("r-htmlwidgets" ,r-htmlwidgets) + ("r-jsonlite" ,r-jsonlite) + ("r-lazyeval" ,r-lazyeval) + ("r-magrittr" ,r-magrittr) + ("r-maps" ,r-maps) + ("r-pryr" ,r-pryr) + ("r-scales" ,r-scales))) + ;; Version 0.12.15 is mentioned in lib/htmlwidgets/rbokeh.yaml. + (native-inputs + `(("esbuild" ,esbuild) + ("js-bokeh-widgets" + ,(origin + (method url-fetch) + (uri "https://unpkg.com/bokehjs@0.12.15/build/js/bokeh-widgets.js") + (sha256 + (base32 + "07v9lrkfcbdznpb10qqwi4m660zp65g85vlnfw7kn83zmkxkhhxy")))) + ("js-bokeh" + ,(origin + (method url-fetch) + (uri "https://unpkg.com/bokehjs@0.12.15/build/js/bokeh.js") + (sha256 + (base32 + "1pq0059aad7d2jv50nv9449p3w0gbkxkl0mhblc76m5d9qjqav2q")))) + ("r-knitr" ,r-knitr))) + (home-page "https://cran.r-project.org/web/packages/rbokeh/") + (synopsis "R interface for the Bokeh visualization library") + (description + "This package provides a native R plotting library that provides a +flexible declarative interface for creating interactive web-based graphics, +backed by the @url{https://bokeh.pydata.org/, Bokeh visualization library}.") + (license license:expat))) + (define-public r-fauxpas (package (name "r-fauxpas") -- cgit v1.2.3 From 53a16a2143bbc3cc5f9f014ab6fb6afc9d0064d6 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 30 Nov 2021 20:28:51 +0100 Subject: gnu: Add r-seuratdata. * gnu/packages/cran.scm (r-seuratdata): New variable. --- gnu/packages/cran.scm | 38 ++++++++++++++++++++++++++++++++++++++ 1 file changed, 38 insertions(+) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 504da4e3da..5f12cc55bf 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -28740,6 +28740,44 @@ rapid and on-disk conversion between h5Seurat and AnnData objects, with the goal of enhancing interoperability between Seurat and Scanpy.") (license license:gpl3)))) +(define-public r-seuratdata + (let ((commit "b59556b24d7d6728a5744c9c715dd5f7f32ed7a5") + (revision "1")) + (package + (name "r-seuratdata") + (version (git-version "0.2.1" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/satijalab/seurat-data") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1xfdmdmgn4r0z6w4cxa98ic6xk8i6qz054r215dvqbjs1vydsbf9")))) + (properties `((upstream-name . "SeuratData"))) + (build-system r-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + ;; When there is no HOME directory, this package will fail to load + ;; the included list of packages. + (add-after 'unpack 'set-HOME + (lambda _ (setenv "HOME" "/tmp")))))) + (propagated-inputs + `(("r-cli" ,r-cli) + ("r-crayon" ,r-crayon) + ("r-rappdirs" ,r-rappdirs))) + (home-page "https://github.com/satijalab/seurat-data") + (synopsis "Install and manage Seurat datasets") + (description + "Single cell RNA sequencing datasets can be large, consisting of +matrices that contain expression data for several thousand features across +several thousand cells. This package is designed to easily install, manage, +and learn about various single-cell datasets, provided Seurat objects and +distributed as independent packages.") + (license license:gpl3)))) + (define-public r-phangorn (package (name "r-phangorn") -- cgit v1.2.3 From dcf857e4864ea356a245df9dcfd67fdb9fd0217f Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Fri, 3 Dec 2021 16:46:29 +0100 Subject: gnu: Add r-fpeek. * gnu/packages/cran.scm (r-fpeek): New variable. --- gnu/packages/cran.scm | 22 ++++++++++++++++++++++ 1 file changed, 22 insertions(+) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 5f12cc55bf..8d585f0970 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -632,6 +632,28 @@ Currently handlers are provided for CDK, MOE and BCI fingerprint data.") ;; Any version of the GPL (license (list license:gpl2+ license:gpl3+)))) +(define-public r-fpeek + (package + (name "r-fpeek") + (version "0.1.2") + (source + (origin + (method url-fetch) + (uri (cran-uri "fpeek" version)) + (sha256 + (base32 "0kv46g21ndxchg3q8ynq7hjjkh6i2zlc21axn5y1jjzigrw047ii")))) + (properties `((upstream-name . "fpeek"))) + (build-system r-build-system) + (propagated-inputs `(("r-rcpp" ,r-rcpp))) + (home-page "https://github.com/davidgohel/fpeek") + (synopsis "Check text files content at a glance") + (description + "This package provides tools to help working with text files. It can +return the number of lines; print the first and last lines; convert encoding. +Operations are made without reading the entire file before starting, resulting +in good performances with large files.") + (license license:expat))) + (define-public r-ggalluvial (package (name "r-ggalluvial") -- cgit v1.2.3