From 17f3ec42ec1a4139ec87d968053de912ae2e200d Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 7 Sep 2021 12:48:40 +0200 Subject: gnu: Add r-netrep. * gnu/packages/cran.scm (r-netrep): New variable. --- gnu/packages/cran.scm | 31 +++++++++++++++++++++++++++++++ 1 file changed, 31 insertions(+) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 73e3b760e5..03dcf1c396 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -9470,6 +9470,37 @@ visualization and candidate genes around SNPs.") of precision-recall and ROC (Receiver Operator Characteristics) curves.") (license license:gpl3))) +(define-public r-netrep + (package + (name "r-netrep") + (version "1.2.4") + (source + (origin + (method url-fetch) + (uri (cran-uri "NetRep" version)) + (sha256 + (base32 + "1swlb2k9bc7whvslxbklz864j9ynvna73hvq5rhv61cv5vy05ksd")))) + (properties `((upstream-name . "NetRep"))) + (build-system r-build-system) + (propagated-inputs + `(("r-abind" ,r-abind) + ("r-bh" ,r-bh) + ("r-foreach" ,r-foreach) + ("r-rcolorbrewer" ,r-rcolorbrewer) + ("r-rcpp" ,r-rcpp) + ("r-rcpparmadillo" ,r-rcpparmadillo) + ("r-rhpcblasctl" ,r-rhpcblasctl) + ("r-statmod" ,r-statmod))) + (native-inputs `(("r-knitr" ,r-knitr))) + (home-page "https://cran.r-project.org/package=NetRep") + (synopsis "Permutation testing network module preservation across datasets") + (description + "This package provides functions for assessing the +replication/preservation of a network module's topology across datasets +through permutation testing.") + (license license:gpl2))) + (define-public r-abcoptim (package (name "r-abcoptim") -- cgit v1.2.3