From 1f7c06965c6b7707bb3d7ca0c2da606c11e53ee0 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Wed, 8 Dec 2021 12:46:33 +0100 Subject: gnu: mantis: Update to 0.1-2.b6979a2. * gnu/packages/bioinformatics.scm (mantis): Update to 0.1-2.b6979a2. [arguments]: Disable the use of SSE4.2 instructions. [native-inputs]: Build with GCC 7. --- gnu/packages/bioinformatics.scm | 15 ++++++++++----- 1 file changed, 10 insertions(+), 5 deletions(-) (limited to 'gnu/packages/bioinformatics.scm') diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 41b3cd90d0..90f26be249 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -11337,11 +11337,12 @@ enrichment.") (license license:expat))) (define-public mantis - (let ((commit "4ffd171632c2cb0056a86d709dfd2bf21bc69b84") - (revision "1")) + ;; This is an arbitrary commit as a year has passed since 0.1 was tagged. + (let ((commit "b6979a269172a45201c8366680d8b889f889432b") + (revision "2")) (package (name "mantis") - (version (git-version "0" revision commit)) + (version (git-version "0.1" revision commit)) (source (origin (method git-fetch) (uri (git-reference @@ -11350,13 +11351,17 @@ enrichment.") (file-name (git-file-name name version)) (sha256 (base32 - "0iqbr0dhmlc8mzpirmm2s4pkzkwdgrcx50yx6cv3wlr2qi064p55")))) + "0dq8a785hnaxx5kq757m5czs8xpcjpcph1inq2nm8h6zfvqyj8xs")))) (build-system cmake-build-system) - (arguments '(#:tests? #f)) ; there are none + (arguments + '(#:tests? #f ; there are none + #:configure-flags (list "-DNH=ON"))) ; do not use SSE4.2 instructions (inputs `(("sdsl-lite" ,sdsl-lite) ("openssl" ,openssl) ("zlib" ,zlib))) + (native-inputs + `(("gcc" ,gcc-7))) (home-page "https://github.com/splatlab/mantis") (synopsis "Large-scale sequence-search index data structure") (description "Mantis is a space-efficient data structure that can be -- cgit v1.2.3