From 29fd736a66bd503c325f95625871d0ebcad6dd69 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 17 Dec 2019 19:48:58 +0100 Subject: gnu: Add r-biobroom. * gnu/packages/bioconductor.scm (r-biobroom): New variable. --- gnu/packages/bioconductor.scm | 30 ++++++++++++++++++++++++++++++ 1 file changed, 30 insertions(+) (limited to 'gnu/packages/bioconductor.scm') diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 0b3df4f59c..577a43c87c 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -6926,3 +6926,33 @@ cross-target analyses of both public and custom bioassays, generation of preloaded database that provides access to a substantial portion of publicly available bioactivity data.") (license license:artistic2.0))) + +(define-public r-biobroom + (package + (name "r-biobroom") + (version "1.18.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "biobroom" version)) + (sha256 + (base32 + "1480ycdsh9xdhbpr47vdw5g6m8arqsnp8hc19wwhzm8npxh4qqlb")))) + (properties `((upstream-name . "biobroom"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biobase" ,r-biobase) + ("r-broom" ,r-broom) + ("r-dplyr" ,r-dplyr) + ("r-tidyr" ,r-tidyr))) + (home-page "https://github.com/StoreyLab/biobroom") + (synopsis "Turn Bioconductor objects into tidy data frames") + (description + "This package contains methods for converting standard objects +constructed by bioinformatics packages, especially those in Bioconductor, and +converting them to @code{tidy} data. It thus serves as a complement to the +@code{broom} package, and follows the same tidy, augment, glance division of +tidying methods. Tidying data makes it easy to recombine, reshape and +visualize bioinformatics analyses.") + ;; Any version of the LGPL. + (license license:lgpl3+))) -- cgit v1.2.3