From baf766a7ff9db45c707b4539176f2143fbd90efd Mon Sep 17 00:00:00 2001
From: Danny Milosavljevic <dannym@scratchpost.org>
Date: Fri, 1 Feb 2019 17:06:25 +0100
Subject: gnu: mrustc: Fix deserialization bug in communication with the
 procedural macro compiler plugin.

* gnu/packages/patches/mrustc-0.8.0-fix-variable-length-integer-receiving.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/rust.scm (mrustc)[source]: Use it.

Co-authored-by: Chris Marusich <cmmarusich@gmail.com>
---
 gnu/local.mk | 1 +
 1 file changed, 1 insertion(+)

(limited to 'gnu/local.mk')

diff --git a/gnu/local.mk b/gnu/local.mk
index 37083ca916..4493470bb4 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -1046,6 +1046,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/mozjs38-tracelogger.patch		\
   %D%/packages/patches/mozjs38-version-detection.patch		\
   %D%/packages/patches/mrrescue-support-love-11.patch		\
+  %D%/packages/patches/mrustc-0.8.0-fix-variable-length-integer-receiving.patch \
   %D%/packages/patches/mumble-1.2.19-abs.patch			\
   %D%/packages/patches/mumps-build-parallelism.patch		\
   %D%/packages/patches/mupen64plus-ui-console-notice.patch	\
-- 
cgit v1.2.3


From 350b7f8a7441d7df89249b356299a843b9a18794 Mon Sep 17 00:00:00 2001
From: Marius Bakke <mbakke@fastmail.com>
Date: Wed, 6 Mar 2019 16:00:12 +0100
Subject: gnu: valgrind: Update to 3.14.0.

* gnu/packages/patches/valgrind-glibc-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/valgrind.scm (valgrind): Update to 3.14.0.
[supported-systems]: Add mips64el-linux.
---
 gnu/local.mk                                     |  1 -
 gnu/packages/patches/valgrind-glibc-compat.patch | 18 ------------------
 gnu/packages/valgrind.scm                        | 13 ++++---------
 3 files changed, 4 insertions(+), 28 deletions(-)
 delete mode 100644 gnu/packages/patches/valgrind-glibc-compat.patch

(limited to 'gnu/local.mk')

diff --git a/gnu/local.mk b/gnu/local.mk
index eecace58c6..f51b9fbfe2 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -1308,7 +1308,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/upower-builddir.patch			\
   %D%/packages/patches/upx-fix-CVE-2017-15056.patch		\
   %D%/packages/patches/valgrind-enable-arm.patch		\
-  %D%/packages/patches/valgrind-glibc-compat.patch		\
   %D%/packages/patches/vboot-utils-fix-format-load-address.patch	\
   %D%/packages/patches/vboot-utils-fix-tests-show-contents.patch	\
   %D%/packages/patches/vboot-utils-skip-test-workbuf.patch	\
diff --git a/gnu/packages/patches/valgrind-glibc-compat.patch b/gnu/packages/patches/valgrind-glibc-compat.patch
deleted file mode 100644
index 4f8effd207..0000000000
--- a/gnu/packages/patches/valgrind-glibc-compat.patch
+++ /dev/null
@@ -1,18 +0,0 @@
-Fix build failure with glibc 2.26.
-
-Patch copied from upstream source repository:
-https://sourceware.org/git/?p=valgrind.git;a=commit;h=2b5eab6a8db1b0487a3ad7fc4e7eeda6d3513626
-
-diff --git a/memcheck/tests/linux/stack_changes.c b/memcheck/tests/linux/stack_changes.c
-index a978fc2..7f97b90 100644
---- a/memcheck/tests/linux/stack_changes.c
-+++ b/memcheck/tests/linux/stack_changes.c
-@@ -10,7 +10,7 @@
- // This test is checking the libc context calls (setcontext, etc.) and
- // checks that Valgrind notices their stack changes properly.
- 
--typedef  struct ucontext  mycontext;
-+typedef  ucontext_t  mycontext;
- 
- mycontext ctx1, ctx2, oldc;
- int count;
diff --git a/gnu/packages/valgrind.scm b/gnu/packages/valgrind.scm
index 0a6206b3b1..9952fa1647 100644
--- a/gnu/packages/valgrind.scm
+++ b/gnu/packages/valgrind.scm
@@ -32,7 +32,7 @@
 (define-public valgrind
   (package
     (name "valgrind")
-    (version "3.13.0")
+    (version "3.14.0")
     (source (origin
               (method url-fetch)
               (uri (list (string-append "http://www.valgrind.org/downloads"
@@ -41,9 +41,8 @@
                                         "/valgrind-" version ".tar.bz2")))
               (sha256
                (base32
-                "0fqc3684grrbxwsic1rc5ryxzxmigzjx9p5vf3lxa37h0gpq0rnp"))
-              (patches (search-patches "valgrind-enable-arm.patch"
-                                       "valgrind-glibc-compat.patch"))))
+                "19ds42jwd89zrsjb94g7gizkkzipn8xik3xykrpcqxylxyzi2z03"))
+              (patches (search-patches "valgrind-enable-arm.patch"))))
     (build-system gnu-build-system)
     (outputs '("doc"                              ;16 MB
                "out"))
@@ -79,8 +78,4 @@
 tools.  There are Valgrind tools that can automatically detect many memory
 management and threading bugs, and profile your programs in detail.  You can
 also use Valgrind to build new tools.")
-    (license gpl2+)
-
-    ;; Building VEX on mips64el-linux fails with "opcode not supported on this
-    ;; processor: mips3".
-    (supported-systems (delete "mips64el-linux" %supported-systems))))
+    (license gpl2+)))
-- 
cgit v1.2.3


From 0daf0efbe633d26bf51d8221573332d54c6bd55e Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus <rekado@elephly.net>
Date: Sun, 5 Aug 2018 16:37:39 +0200
Subject: gnu: gcr: Update to 3.28.0.

* gnu/packages/patches/gcr-disable-failing-tests.patch,
gnu/packages/patches/gcr-fix-collection-tests-to-work-with-gpg-21.patch:
Remove files.
* gnu/local.mk (dist_patch_DATA): Remove patches.
* gnu/packages/gnome.scm (gcr): Update to 3.28.0.
[arguments]: Add phase "disable-failing-tests"; rewrite "pre-check" phase.
[native-inputs]: Add libxml2.
---
 gnu/local.mk                                       |   2 -
 gnu/packages/gnome.scm                             |  45 ++++----
 .../patches/gcr-disable-failing-tests.patch        | 126 ---------------------
 ...-fix-collection-tests-to-work-with-gpg-21.patch |  31 -----
 4 files changed, 26 insertions(+), 178 deletions(-)
 delete mode 100644 gnu/packages/patches/gcr-disable-failing-tests.patch
 delete mode 100644 gnu/packages/patches/gcr-fix-collection-tests-to-work-with-gpg-21.patch

(limited to 'gnu/local.mk')

diff --git a/gnu/local.mk b/gnu/local.mk
index f51b9fbfe2..45fa7d2007 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -794,8 +794,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/gcc-6-source-date-epoch-1.patch		\
   %D%/packages/patches/gcc-6-source-date-epoch-2.patch		\
   %D%/packages/patches/gcc-8-strmov-store-file-names.patch	\
-  %D%/packages/patches/gcr-disable-failing-tests.patch		\
-  %D%/packages/patches/gcr-fix-collection-tests-to-work-with-gpg-21.patch	\
   %D%/packages/patches/gd-CVE-2018-5711.patch			\
   %D%/packages/patches/gd-CVE-2018-1000222.patch		\
   %D%/packages/patches/gd-CVE-2019-6977.patch			\
diff --git a/gnu/packages/gnome.scm b/gnu/packages/gnome.scm
index 4d4c831448..aa6e95456a 100644
--- a/gnu/packages/gnome.scm
+++ b/gnu/packages/gnome.scm
@@ -587,36 +587,43 @@ and keep up to date translations of documentation.")
 (define-public gcr
   (package
     (name "gcr")
-    (version "3.20.0")
+    (version "3.28.0")
     (source (origin
-             (method url-fetch)
-             (uri (string-append "mirror://gnome/sources/" name "/"
-                                 (version-major+minor version)  "/"
-                                 name "-" version ".tar.xz"))
-             (sha256
-              (base32
-               "0ydk9dzxx6snxza7j5ps8x932hbr3x1b8hhcaqjq4w4admi2qmwh"))
-             (patches
-              (search-patches "gcr-disable-failing-tests.patch"
-                              "gcr-fix-collection-tests-to-work-with-gpg-21.patch"))))
+              (method url-fetch)
+              (uri (string-append "mirror://gnome/sources/" name "/"
+                                  (version-major+minor version)  "/"
+                                  name "-" version ".tar.xz"))
+              (sha256
+               (base32
+                "02xgky22xgvhgd525khqh64l5i21ca839fj9jzaqdi3yvb8pbq8m"))))
     (build-system gnu-build-system)
     (arguments
-     '(#:phases (modify-phases %standard-phases
-                  (add-before
-                   'check 'pre-check
-                   (lambda* (#:key inputs #:allow-other-keys)
-                     (substitute* "build/tap-driver"
-                       (("/usr/bin/env python") (which "python"))))))))
+     '(#:phases
+       (modify-phases %standard-phases
+         ;; These fail because /var/lib/dbus/machine-id is not present in the
+         ;; build environment.
+         (add-after 'unpack 'disable-failing-tests
+           (lambda _
+             (substitute* "gcr/test-system-prompt.c"
+               (("g_test_add") "//")
+               (("return.*") "return 0;"))
+             #t))
+         (add-before 'check 'pre-check
+           (lambda _
+             ;; Some tests expect to write to $HOME.
+             (setenv "HOME" "/tmp")
+             #t)))))
     (inputs
      `(("dbus" ,dbus)
-       ("gnupg" ,gnupg) ;called as a child process during tests
+       ("gnupg" ,gnupg)                ;called as a child process during tests
        ("libgcrypt" ,libgcrypt)))
     (native-inputs
-     `(("python" ,python-2) ;for tests
+     `(("python" ,python-2)             ;for tests
        ("pkg-config" ,pkg-config)
        ("glib" ,glib "bin")
        ("gobject-introspection" ,gobject-introspection)
        ("intltool" ,intltool)
+       ("libxml2" ,libxml2)
        ("xsltproc" ,libxslt)))
     ;; mentioned in gck.pc, gcr.pc and gcr-ui.pc
     (propagated-inputs
diff --git a/gnu/packages/patches/gcr-disable-failing-tests.patch b/gnu/packages/patches/gcr-disable-failing-tests.patch
deleted file mode 100644
index 862c51faf0..0000000000
--- a/gnu/packages/patches/gcr-disable-failing-tests.patch
+++ /dev/null
@@ -1,126 +0,0 @@
-This patch removes a group of tests that fail because /var/lib/dbus/machine-id
-is not present in the build environment.
-
---- gcr-3.20.0.old/Makefile.in	2017-07-03 18:05:10.742595317 -0400
-+++ gcr-3.20.0/Makefile.in	2017-07-03 18:08:26.379565428 -0400
-@@ -482,8 +482,7 @@
- 	test-openssh$(EXEEXT) test-secure-memory$(EXEEXT) \
- 	test-trust$(EXEEXT) test-parser$(EXEEXT) test-record$(EXEEXT) \
- 	test-memory-icon$(EXEEXT) test-gnupg-key$(EXEEXT) \
--	test-gnupg-collection$(EXEEXT) test-gnupg-process$(EXEEXT) \
--	test-system-prompt$(EXEEXT)
-+	test-gnupg-collection$(EXEEXT) test-gnupg-process$(EXEEXT)
- @WITH_GTK_TRUE@am__EXEEXT_4 = frob-certificate$(EXEEXT) \
- @WITH_GTK_TRUE@	frob-combo-selector$(EXEEXT) \
- @WITH_GTK_TRUE@	frob-gnupg-selector$(EXEEXT) \
-@@ -882,14 +881,6 @@
- am_test_symkey_OBJECTS = egg/test-symkey.$(OBJEXT)
- test_symkey_OBJECTS = $(am_test_symkey_OBJECTS)
- test_symkey_DEPENDENCIES = $(am__DEPENDENCIES_4)
--am_test_system_prompt_OBJECTS =  \
--	gcr/test_system_prompt-test-system-prompt.$(OBJEXT)
--test_system_prompt_OBJECTS = $(am_test_system_prompt_OBJECTS)
--test_system_prompt_DEPENDENCIES = $(am__DEPENDENCIES_3)
--test_system_prompt_LINK = $(LIBTOOL) $(AM_V_lt) --tag=CC \
--	$(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=link $(CCLD) \
--	$(test_system_prompt_CFLAGS) $(CFLAGS) $(AM_LDFLAGS) \
--	$(LDFLAGS) -o $@
- am_test_trust_OBJECTS = gcr/test_trust-test-trust.$(OBJEXT)
- test_trust_OBJECTS = $(am_test_trust_OBJECTS)
- test_trust_DEPENDENCIES = $(am__DEPENDENCIES_3)
-@@ -974,8 +965,7 @@
- 	$(test_secret_exchange_SOURCES) $(test_secure_memory_SOURCES) \
- 	$(test_simple_certificate_SOURCES) \
- 	$(test_subject_public_key_SOURCES) $(test_symkey_SOURCES) \
--	$(test_system_prompt_SOURCES) $(test_trust_SOURCES) \
--	$(test_util_SOURCES)
-+	$(test_trust_SOURCES) $(test_util_SOURCES)
- DIST_SOURCES = $(libegg_asn1x_la_SOURCES) $(libegg_hex_la_SOURCES) \
- 	$(libegg_secmem_la_SOURCES) $(libegg_test_la_SOURCES) \
- 	$(libegg_la_SOURCES) $(libgck_@GCK_MAJOR@_la_SOURCES) \
-@@ -1016,8 +1006,7 @@
- 	$(test_secret_exchange_SOURCES) $(test_secure_memory_SOURCES) \
- 	$(test_simple_certificate_SOURCES) \
- 	$(test_subject_public_key_SOURCES) $(test_symkey_SOURCES) \
--	$(test_system_prompt_SOURCES) $(test_trust_SOURCES) \
--	$(test_util_SOURCES)
-+	$(test_trust_SOURCES) $(test_util_SOURCES)
- RECURSIVE_TARGETS = all-recursive check-recursive cscopelist-recursive \
- 	ctags-recursive dvi-recursive html-recursive info-recursive \
- 	install-data-recursive install-dvi-recursive \
-@@ -2117,8 +2106,7 @@
- 	test-memory-icon \
- 	test-gnupg-key \
- 	test-gnupg-collection \
--	test-gnupg-process \
--	test-system-prompt
-+	test-gnupg-process
- 
- test_certificate_SOURCES = gcr/test-certificate.c
- test_certificate_CFLAGS = $(gcr_CFLAGS)
-@@ -2171,9 +2159,6 @@
- test_subject_public_key_SOURCES = gcr/test-subject-public-key.c
- test_subject_public_key_CFLAGS = $(gcr_CFLAGS)
- test_subject_public_key_LDADD = $(gcr_LIBS)
--test_system_prompt_SOURCES = gcr/test-system-prompt.c
--test_system_prompt_CFLAGS = $(gcr_CFLAGS)
--test_system_prompt_LDADD = $(gcr_LIBS)
- test_trust_SOURCES = gcr/test-trust.c
- test_trust_CFLAGS = $(gcr_CFLAGS)
- test_trust_LDADD = $(gcr_LIBS)
-@@ -3283,12 +3268,6 @@
- test-symkey$(EXEEXT): $(test_symkey_OBJECTS) $(test_symkey_DEPENDENCIES) $(EXTRA_test_symkey_DEPENDENCIES) 
- 	@rm -f test-symkey$(EXEEXT)
- 	$(AM_V_CCLD)$(LINK) $(test_symkey_OBJECTS) $(test_symkey_LDADD) $(LIBS)
--gcr/test_system_prompt-test-system-prompt.$(OBJEXT):  \
--	gcr/$(am__dirstamp) gcr/$(DEPDIR)/$(am__dirstamp)
--
--test-system-prompt$(EXEEXT): $(test_system_prompt_OBJECTS) $(test_system_prompt_DEPENDENCIES) $(EXTRA_test_system_prompt_DEPENDENCIES) 
--	@rm -f test-system-prompt$(EXEEXT)
--	$(AM_V_CCLD)$(test_system_prompt_LINK) $(test_system_prompt_OBJECTS) $(test_system_prompt_LDADD) $(LIBS)
- gcr/test_trust-test-trust.$(OBJEXT): gcr/$(am__dirstamp) \
- 	gcr/$(DEPDIR)/$(am__dirstamp)
- 
-@@ -3446,7 +3425,6 @@
- @AMDEP_TRUE@@am__include@ @am__quote@gcr/$(DEPDIR)/test_secure_memory-test-secure-memory.Po@am__quote@
- @AMDEP_TRUE@@am__include@ @am__quote@gcr/$(DEPDIR)/test_simple_certificate-test-simple-certificate.Po@am__quote@
- @AMDEP_TRUE@@am__include@ @am__quote@gcr/$(DEPDIR)/test_subject_public_key-test-subject-public-key.Po@am__quote@
--@AMDEP_TRUE@@am__include@ @am__quote@gcr/$(DEPDIR)/test_system_prompt-test-system-prompt.Po@am__quote@
- @AMDEP_TRUE@@am__include@ @am__quote@gcr/$(DEPDIR)/test_trust-test-trust.Po@am__quote@
- @AMDEP_TRUE@@am__include@ @am__quote@gcr/$(DEPDIR)/test_util-test-util.Po@am__quote@
- @AMDEP_TRUE@@am__include@ @am__quote@ui/$(DEPDIR)/frob_certificate-frob-certificate.Po@am__quote@
-@@ -4968,20 +4946,6 @@
- @AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
- @am__fastdepCC_FALSE@	$(AM_V_CC@am__nodep@)$(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(test_subject_public_key_CFLAGS) $(CFLAGS) -c -o gcr/test_subject_public_key-test-subject-public-key.obj `if test -f 'gcr/test-subject-public-key.c'; then $(CYGPATH_W) 'gcr/test-subject-public-key.c'; else $(CYGPATH_W) '$(srcdir)/gcr/test-subject-public-key.c'; fi`
- 
--gcr/test_system_prompt-test-system-prompt.o: gcr/test-system-prompt.c
--@am__fastdepCC_TRUE@	$(AM_V_CC)$(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(test_system_prompt_CFLAGS) $(CFLAGS) -MT gcr/test_system_prompt-test-system-prompt.o -MD -MP -MF gcr/$(DEPDIR)/test_system_prompt-test-system-prompt.Tpo -c -o gcr/test_system_prompt-test-system-prompt.o `test -f 'gcr/test-system-prompt.c' || echo '$(srcdir)/'`gcr/test-system-prompt.c
--@am__fastdepCC_TRUE@	$(AM_V_at)$(am__mv) gcr/$(DEPDIR)/test_system_prompt-test-system-prompt.Tpo gcr/$(DEPDIR)/test_system_prompt-test-system-prompt.Po
--@AMDEP_TRUE@@am__fastdepCC_FALSE@	$(AM_V_CC)source='gcr/test-system-prompt.c' object='gcr/test_system_prompt-test-system-prompt.o' libtool=no @AMDEPBACKSLASH@
--@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
--@am__fastdepCC_FALSE@	$(AM_V_CC@am__nodep@)$(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(test_system_prompt_CFLAGS) $(CFLAGS) -c -o gcr/test_system_prompt-test-system-prompt.o `test -f 'gcr/test-system-prompt.c' || echo '$(srcdir)/'`gcr/test-system-prompt.c
--
--gcr/test_system_prompt-test-system-prompt.obj: gcr/test-system-prompt.c
--@am__fastdepCC_TRUE@	$(AM_V_CC)$(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(test_system_prompt_CFLAGS) $(CFLAGS) -MT gcr/test_system_prompt-test-system-prompt.obj -MD -MP -MF gcr/$(DEPDIR)/test_system_prompt-test-system-prompt.Tpo -c -o gcr/test_system_prompt-test-system-prompt.obj `if test -f 'gcr/test-system-prompt.c'; then $(CYGPATH_W) 'gcr/test-system-prompt.c'; else $(CYGPATH_W) '$(srcdir)/gcr/test-system-prompt.c'; fi`
--@am__fastdepCC_TRUE@	$(AM_V_at)$(am__mv) gcr/$(DEPDIR)/test_system_prompt-test-system-prompt.Tpo gcr/$(DEPDIR)/test_system_prompt-test-system-prompt.Po
--@AMDEP_TRUE@@am__fastdepCC_FALSE@	$(AM_V_CC)source='gcr/test-system-prompt.c' object='gcr/test_system_prompt-test-system-prompt.obj' libtool=no @AMDEPBACKSLASH@
--@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
--@am__fastdepCC_FALSE@	$(AM_V_CC@am__nodep@)$(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(test_system_prompt_CFLAGS) $(CFLAGS) -c -o gcr/test_system_prompt-test-system-prompt.obj `if test -f 'gcr/test-system-prompt.c'; then $(CYGPATH_W) 'gcr/test-system-prompt.c'; else $(CYGPATH_W) '$(srcdir)/gcr/test-system-prompt.c'; fi`
--
- gcr/test_trust-test-trust.o: gcr/test-trust.c
- @am__fastdepCC_TRUE@	$(AM_V_CC)$(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(test_trust_CFLAGS) $(CFLAGS) -MT gcr/test_trust-test-trust.o -MD -MP -MF gcr/$(DEPDIR)/test_trust-test-trust.Tpo -c -o gcr/test_trust-test-trust.o `test -f 'gcr/test-trust.c' || echo '$(srcdir)/'`gcr/test-trust.c
- @am__fastdepCC_TRUE@	$(AM_V_at)$(am__mv) gcr/$(DEPDIR)/test_trust-test-trust.Tpo gcr/$(DEPDIR)/test_trust-test-trust.Po
-@@ -5808,13 +5772,6 @@
- 	$(am__check_pre) $(LOG_DRIVER) --test-name "$$f" \
- 	--log-file $$b.log --trs-file $$b.trs \
- 	$(am__common_driver_flags) $(AM_LOG_DRIVER_FLAGS) $(LOG_DRIVER_FLAGS) -- $(LOG_COMPILE) \
--	"$$tst" $(AM_TESTS_FD_REDIRECT)
--test-system-prompt.log: test-system-prompt$(EXEEXT)
--	@p='test-system-prompt$(EXEEXT)'; \
--	b='test-system-prompt'; \
--	$(am__check_pre) $(LOG_DRIVER) --test-name "$$f" \
--	--log-file $$b.log --trs-file $$b.trs \
--	$(am__common_driver_flags) $(AM_LOG_DRIVER_FLAGS) $(LOG_DRIVER_FLAGS) -- $(LOG_COMPILE) \
- 	"$$tst" $(AM_TESTS_FD_REDIRECT)
- .test.log:
- 	@p='$<'; \
diff --git a/gnu/packages/patches/gcr-fix-collection-tests-to-work-with-gpg-21.patch b/gnu/packages/patches/gcr-fix-collection-tests-to-work-with-gpg-21.patch
deleted file mode 100644
index 86a8ed1691..0000000000
--- a/gnu/packages/patches/gcr-fix-collection-tests-to-work-with-gpg-21.patch
+++ /dev/null
@@ -1,31 +0,0 @@
-This patch comes from Debian.
-
-https://bugzilla.gnome.org/show_bug.cgi?id=771052
-https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=835737
-
---- gcr-3.20.0.old/gcr/test-gnupg-collection.c	2017-06-29 14:26:33.810838197 -0400
-+++ gcr-3.20.0/gcr/test-gnupg-collection.c	2017-06-30 17:25:09.149383067 -0400
-@@ -115,6 +115,14 @@
-
-	g_object_unref (test->collection);
-
-+	/* remove potential gpg 2.1 extras, ignore any errors. */
-+	cmd = g_strdup_printf ("rm -rf %s/*.d", test->directory);
-+	system(cmd);
-+	g_free(cmd);
-+	cmd = g_strdup_printf ("rm -f %s/.gpg-v21-migrated", test->directory);
-+	system(cmd);
-+	g_free(cmd);
-+
-	cmd = g_strdup_printf ("rm -f %s/*", test->directory);
-	g_spawn_check_exit_status (system (cmd), &error);
-	g_assert_no_error (error);
-@@ -202,7 +210,7 @@
-	GcrGnupgKey *key;
-
-	_gcr_gnupg_collection_load_async (test->collection, NULL, on_async_ready, test);
--	egg_test_wait_until (500);
-+	egg_test_wait_until (2500);
-	g_assert (test->result);
-	_gcr_gnupg_collection_load_finish (test->collection, test->result, &error);
-	g_assert_no_error (error);
-- 
cgit v1.2.3


From 9f3c6c8825e2935766ac5bc1880ed74f7fce48f4 Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus <rekado@elephly.net>
Date: Mon, 6 Aug 2018 16:52:49 +0200
Subject: gnu: gnome-todo: Update to 3.28.1.

* gnu/packages/gnome.scm (gnome-todo): Update to 3.28.1.
* gnu/local.mk (dist_patch_DATA): Remove patch.
* gnu/packages/patches/gnome-todo-libical-compat.patch: Remove file.
---
 gnu/local.mk                                         |  1 -
 gnu/packages/gnome.scm                               |  5 ++---
 gnu/packages/patches/gnome-todo-libical-compat.patch | 17 -----------------
 3 files changed, 2 insertions(+), 21 deletions(-)
 delete mode 100644 gnu/packages/patches/gnome-todo-libical-compat.patch

(limited to 'gnu/local.mk')

diff --git a/gnu/local.mk b/gnu/local.mk
index 45fa7d2007..38fee9e4ea 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -838,7 +838,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/gmp-arm-asm-nothumb.patch		\
   %D%/packages/patches/gmp-faulty-test.patch			\
   %D%/packages/patches/gnome-shell-theme.patch			\
-  %D%/packages/patches/gnome-todo-libical-compat.patch		\
   %D%/packages/patches/gnome-tweak-tool-search-paths.patch	\
   %D%/packages/patches/gnucash-fix-test-transaction-failure.patch \
   %D%/packages/patches/gnutls-skip-trust-store-test.patch	\
diff --git a/gnu/packages/gnome.scm b/gnu/packages/gnome.scm
index 6f84d60928..098b039605 100644
--- a/gnu/packages/gnome.scm
+++ b/gnu/packages/gnome.scm
@@ -6440,16 +6440,15 @@ desktop.  It supports multiple calendars, month, week and year view.")
 (define-public gnome-todo
   (package
     (name "gnome-todo")
-    (version "3.26.2")
+    (version "3.28.1")
     (source (origin
               (method url-fetch)
               (uri (string-append "mirror://gnome/sources/" name "/"
                                   (version-major+minor version) "/"
                                   name "-" version ".tar.xz"))
-              (patches (search-patches "gnome-todo-libical-compat.patch"))
               (sha256
                (base32
-                "106xx1w18pxjmj5k0k2qjzi6b3c3kaz7b5kyrpknykibnr401ff9"))))
+                "08ygqbib72jlf9y0a16k54zz51sncpq2wa18wp81v46q8301ymy7"))))
     (build-system meson-build-system)
     (arguments
      '(#:glib-or-gtk? #t
diff --git a/gnu/packages/patches/gnome-todo-libical-compat.patch b/gnu/packages/patches/gnome-todo-libical-compat.patch
deleted file mode 100644
index 34f2e254b2..0000000000
--- a/gnu/packages/patches/gnome-todo-libical-compat.patch
+++ /dev/null
@@ -1,17 +0,0 @@
-Fix compatibility with libical 3.0.
-
-Patch copied from Arch Linux:
-https://git.archlinux.org/svntogit/packages.git/tree/trunk/gnome-todo-3.26.2-libical-3.0.patch?h=packages/gnome-todo
-
-diff -up gnome-todo-3.26.2/src/gtd-task.c.libical-3.0 gnome-todo-3.26.2/src/gtd-task.c
---- gnome-todo-3.26.2/src/gtd-task.c.libical-3.0	2017-11-08 14:53:53.484294926 +0100
-+++ gnome-todo-3.26.2/src/gtd-task.c	2017-11-08 14:53:57.208294874 +0100
-@@ -778,7 +778,7 @@ gtd_task_set_complete (GtdTask  *task,
-           dt->minute = g_date_time_get_minute (now);
-           dt->second = g_date_time_get_seconds (now);
-           dt->is_date = 0;
--          dt->is_utc = 1;
-+          dt->zone = icaltimezone_get_utc_timezone ();
- 
-           /* convert timezone
-            *
-- 
cgit v1.2.3


From 81382e3f6d4eb0261bf513a16be58d8d0b7373f2 Mon Sep 17 00:00:00 2001
From: Marius Bakke <mbakke@fastmail.com>
Date: Fri, 15 Mar 2019 16:03:59 +0100
Subject: gnu: meson: Update to 0.50.0.

* gnu/packages/build-tools.scm (meson): Update to 0.50.0.
* gnu/packages/patches/at-spi2-core-meson-compat.patch,
gnu/packages/patches/totem-meson-compat.patch: New files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/gnome.scm (totem)[source](patches): Add totem-meson.compat.patch.
* gnu/packages/gtk.scm (at-spi2-core)[source](patches): New field.
---
 gnu/local.mk                                         |  2 ++
 gnu/packages/build-tools.scm                         |  4 ++--
 gnu/packages/gnome.scm                               |  3 ++-
 gnu/packages/gtk.scm                                 |  1 +
 gnu/packages/patches/at-spi2-core-meson-compat.patch | 18 ++++++++++++++++++
 gnu/packages/patches/totem-meson-compat.patch        | 14 ++++++++++++++
 6 files changed, 39 insertions(+), 3 deletions(-)
 create mode 100644 gnu/packages/patches/at-spi2-core-meson-compat.patch
 create mode 100644 gnu/packages/patches/totem-meson-compat.patch

(limited to 'gnu/local.mk')

diff --git a/gnu/local.mk b/gnu/local.mk
index eb1b5d223d..1d73189b17 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -652,6 +652,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/apr-skip-getservbyname-test.patch	\
   %D%/packages/patches/aria2-CVE-2019-3500.patch		\
   %D%/packages/patches/aspell-default-dict-dir.patch		\
+  %D%/packages/patches/at-spi2-core-meson-compat.patch		\
   %D%/packages/patches/ath9k-htc-firmware-binutils.patch	\
   %D%/packages/patches/ath9k-htc-firmware-gcc.patch		\
   %D%/packages/patches/ath9k-htc-firmware-objcopy.patch		\
@@ -1287,6 +1288,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/tk-find-library.patch			\
   %D%/packages/patches/ttf2eot-cstddef.patch			\
   %D%/packages/patches/ttfautohint-source-date-epoch.patch	\
+  %D%/packages/patches/totem-meson-compat.patch			\
   %D%/packages/patches/totem-meson-easy-codec.patch		\
   %D%/packages/patches/tuxpaint-stamps-path.patch		\
   %D%/packages/patches/twinkle-include-qregexpvalidator.patch	\
diff --git a/gnu/packages/build-tools.scm b/gnu/packages/build-tools.scm
index 7031ed8ea3..71b1756d3b 100644
--- a/gnu/packages/build-tools.scm
+++ b/gnu/packages/build-tools.scm
@@ -160,7 +160,7 @@ files and generates build instructions for the Ninja build system.")
 (define-public meson
   (package
     (name "meson")
-    (version "0.49.2")
+    (version "0.50.0")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://github.com/mesonbuild/meson/"
@@ -168,7 +168,7 @@ files and generates build instructions for the Ninja build system.")
                                   version ".tar.gz"))
               (sha256
                (base32
-                "1z89f71r29laywx75bamjakybv9653wz0vd2l4xhvqy1dqr197zg"))))
+                "07q2wz23wjfk8z66mli1cc9as0ycjp5f39fd4awny82qv8nw86ra"))))
     (build-system python-build-system)
     (arguments
      `(;; FIXME: Tests require many additional inputs, a fix for the RUNPATH
diff --git a/gnu/packages/gnome.scm b/gnu/packages/gnome.scm
index 28048f8da2..c4521cebb9 100644
--- a/gnu/packages/gnome.scm
+++ b/gnu/packages/gnome.scm
@@ -3766,7 +3766,8 @@ for application developers.")
        (sha256
         (base32
          "1llyisls3pzf5bwkpxyfyxc2d3gpa09n5pjy7qsjdqrp3ya4k36g"))
-       (patches (search-patches "totem-meson-easy-codec.patch"))))
+       (patches (search-patches "totem-meson-easy-codec.patch"
+                                "totem-meson-compat.patch"))))
     (build-system meson-build-system)
     (native-inputs
      `(("pkg-config" ,pkg-config)
diff --git a/gnu/packages/gtk.scm b/gnu/packages/gtk.scm
index c790bd8e40..83ed8407da 100644
--- a/gnu/packages/gtk.scm
+++ b/gnu/packages/gtk.scm
@@ -561,6 +561,7 @@ in the GNOME project.")
             (uri (string-append "mirror://gnome/sources/" name "/"
                                 (version-major+minor version)  "/"
                                 name "-" version ".tar.xz"))
+            (patches (search-patches "at-spi2-core-meson-compat.patch"))
             (sha256
              (base32
               "083j1v7kdjrpjsv1b9dl3d8xqj39jyp4cfn8i9gbbm7q2g93b923"))))
diff --git a/gnu/packages/patches/at-spi2-core-meson-compat.patch b/gnu/packages/patches/at-spi2-core-meson-compat.patch
new file mode 100644
index 0000000000..168a31b4ed
--- /dev/null
+++ b/gnu/packages/patches/at-spi2-core-meson-compat.patch
@@ -0,0 +1,18 @@
+Fix build with Meson 0.50.0 and above.
+
+Taken from upstream repository:
+https://gitlab.gnome.org/GNOME/at-spi2-core/commit/44a812ea51223d82f21a098a2d45fcc5c329ce7a
+
+diff --git a/atspi/meson.build b/atspi/meson.build
+index b7a9357df1c4857dffa2ec123cd3073e67a07fea..2a6915d76202dabf923b50e6a8b85cbb83cb43d0 100644
+--- a/atspi/meson.build
++++ b/atspi/meson.build
+@@ -57,7 +57,7 @@ atspi_headers = [
+ 
+ atspi_includedir = join_paths(get_option('prefix'), get_option('includedir'), 'at-spi-2.0', 'atspi')
+ 
+-install_headers(atspi_headers, subdir: atspi_includedir)
++install_headers(atspi_headers, install_dir: atspi_includedir)
+ 
+ atspi_enums = gnome.mkenums('atspi-enum-types',
+                             sources: [ 'atspi-constants.h', 'atspi-types.h' ],
diff --git a/gnu/packages/patches/totem-meson-compat.patch b/gnu/packages/patches/totem-meson-compat.patch
new file mode 100644
index 0000000000..8557908dd0
--- /dev/null
+++ b/gnu/packages/patches/totem-meson-compat.patch
@@ -0,0 +1,14 @@
+Fix an error that occurs with Meson 0.50.0 and later:
+"ERROR: Subdir keyword must not be an absolute path".
+
+--- a/src/meson.build	2019-03-15 00:10:26.882293850 +0100
++++ b/src/meson.build	2019-03-15 00:10:54.312197229 +0100
+@@ -82,7 +82,7 @@
+ 
+ install_headers(
+   headers,
+-  subdir: join_paths(totem_includedir, totem_api_path)
++  install_dir: join_paths(totem_includedir, totem_api_path)
+ )
+ 
+ libtotem_player_sources = files(
-- 
cgit v1.2.3


From 0fa50555975dcad5dc2c886d1c496b2335be6a28 Mon Sep 17 00:00:00 2001
From: Marius Bakke <mbakke@fastmail.com>
Date: Wed, 27 Mar 2019 18:05:05 +0100
Subject: gnu: texlive-bin: Adopt LFS patch.

The origin disappeared, and the new revision does not include all the Poppler
fixes.  Adjust the package to take Arch's Poppler patches instead.

* gnu/packages/patches/texlive-bin-CVE-2018-17407.patch: New file.
* gnu/packages/patches/texlive-bin-pdftex-poppler-compat.patch,
gnu/packages/patches/texlive-bin-xetex-poppler-compat.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/tex.scm (texlive-bin)[source](patches): Likewise.
[arguments]: Likewise.
---
 gnu/local.mk                                       |   3 +-
 .../patches/texlive-bin-CVE-2018-17407.patch       | 249 +++++++++++++++++++++
 .../texlive-bin-pdftex-poppler-compat.patch        | 188 ----------------
 .../patches/texlive-bin-xetex-poppler-compat.patch |  31 ---
 gnu/packages/tex.scm                               |  36 +--
 5 files changed, 269 insertions(+), 238 deletions(-)
 create mode 100644 gnu/packages/patches/texlive-bin-CVE-2018-17407.patch
 delete mode 100644 gnu/packages/patches/texlive-bin-pdftex-poppler-compat.patch
 delete mode 100644 gnu/packages/patches/texlive-bin-xetex-poppler-compat.patch

(limited to 'gnu/local.mk')

diff --git a/gnu/local.mk b/gnu/local.mk
index ec82877970..1844fbd404 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -1276,9 +1276,8 @@ dist_patch_DATA =						\
   %D%/packages/patches/teeworlds-use-latest-wavpack.patch	\
   %D%/packages/patches/texinfo-perl-compat.patch		\
   %D%/packages/patches/texinfo-5-perl-compat.patch		\
+  %D%/packages/patches/texlive-bin-CVE-2018-17407.patch		\
   %D%/packages/patches/texlive-bin-luatex-poppler-compat.patch	\
-  %D%/packages/patches/texlive-bin-pdftex-poppler-compat.patch	\
-  %D%/packages/patches/texlive-bin-xetex-poppler-compat.patch	\
   %D%/packages/patches/telegram-purple-adjust-test.patch	\
   %D%/packages/patches/texi2html-document-encoding.patch	\
   %D%/packages/patches/texi2html-i18n.patch			\
diff --git a/gnu/packages/patches/texlive-bin-CVE-2018-17407.patch b/gnu/packages/patches/texlive-bin-CVE-2018-17407.patch
new file mode 100644
index 0000000000..63646d420c
--- /dev/null
+++ b/gnu/packages/patches/texlive-bin-CVE-2018-17407.patch
@@ -0,0 +1,249 @@
+This patch adds support for newer versions of Poppler and some upstream
+TexLive fixes, including one for CVE-2018-17407.
+
+It is taken from Linux From Scratch:
+<http://www.linuxfromscratch.org/patches/blfs/svn/texlive-20180414-source-upstream_fixes-3.patch>.
+
+Submitted By: Ken Moffat <ken at linuxfromscratch dot org>
+Date: 2018-12-26
+Initial Package Version: 20180414
+Upstream Status: Applied
+Origin: Upstream
+Description: Two fixes, cherry-picked from svn plus a CVE fix.
+I have removed the partial fixes for various system versions of poppler.
+
+r47469 Fix segfault in dvipdfm-x (XeTeX) on 1/2/4-bit transparent indexed PNGs.
+
+r47477 Fix a ptex regression for discontinuous kinsoku table.
+
+Also, via fedora (I got lost in svn) a critical fix for CVE-2018-17407
+
+"A buffer overflow in the handling of Type 1 fonts allows arbitrary code
+execution when a malicious font is loaded by one of the vulnerable tools:
+pdflatex, pdftex, dvips, or luatex."
+
+diff -Naur a/texk/dvipdfm-x/pngimage.c b/texk/dvipdfm-x/pngimage.c
+--- a/texk/dvipdfm-x/pngimage.c	2018-02-17 08:41:35.000000000 +0000
++++ b/texk/dvipdfm-x/pngimage.c	2018-10-09 01:52:01.648670875 +0100
+@@ -964,12 +964,16 @@
+   png_bytep   trans;
+   int         num_trans;
+   png_uint_32 i;
++  png_byte    bpc, mask, shift;
+ 
+   if (!png_get_valid(png_ptr, info_ptr, PNG_INFO_tRNS) ||
+       !png_get_tRNS(png_ptr, info_ptr, &trans, &num_trans, NULL)) {
+     WARN("%s: PNG does not have valid tRNS chunk but tRNS is requested.", PNG_DEBUG_STR);
+     return NULL;
+   }
++  bpc   = png_get_bit_depth(png_ptr, info_ptr);
++  mask  = 0xff >> (8 - bpc);
++  shift = 8 - bpc;
+ 
+   smask = pdf_new_stream(STREAM_COMPRESS);
+   dict  = pdf_stream_dict(smask);
+@@ -981,7 +985,8 @@
+   pdf_add_dict(dict, pdf_new_name("ColorSpace"), pdf_new_name("DeviceGray"));
+   pdf_add_dict(dict, pdf_new_name("BitsPerComponent"), pdf_new_number(8));
+   for (i = 0; i < width*height; i++) {
+-    png_byte idx = image_data_ptr[i];
++    /* data is packed for 1/2/4 bpc formats, msb first */
++    png_byte idx = (image_data_ptr[bpc * i / 8] >> (shift - bpc * i % 8)) & mask;
+     smask_data_ptr[i] = (idx < num_trans) ? trans[idx] : 0xff;
+   }
+   pdf_add_stream(smask, (char *)smask_data_ptr, width*height);
+diff -Naur a/texk/dvipsk/writet1.c b/texk/dvipsk/writet1.c
+--- a/texk/dvipsk/writet1.c	2016-11-25 18:24:26.000000000 +0000
++++ b/texk/dvipsk/writet1.c	2018-10-09 01:52:01.648670875 +0100
+@@ -1449,7 +1449,9 @@
+         *(strend(t1_buf_array) - 1) = ' ';
+ 
+         t1_getline();
++        alloc_array(t1_buf, strlen(t1_line_array) + strlen(t1_buf_array) + 1, T1_BUF_SIZE);
+         strcat(t1_buf_array, t1_line_array);
++        alloc_array(t1_line, strlen(t1_buf_array) + 1, T1_BUF_SIZE);
+         strcpy(t1_line_array, t1_buf_array);
+         t1_line_ptr = eol(t1_line_array);
+     }
+diff -Naur a/texk/web2c/luatexdir/font/writet1.w b/texk/web2c/luatexdir/font/writet1.w
+--- a/texk/web2c/luatexdir/font/writet1.w	2016-11-25 18:24:34.000000000 +0000
++++ b/texk/web2c/luatexdir/font/writet1.w	2018-10-09 01:52:01.648670875 +0100
+@@ -1625,7 +1625,9 @@
+     if (sscanf(p, "%i", &i) != 1) {
+         strcpy(t1_buf_array, t1_line_array);
+         t1_getline();
++        alloc_array(t1_buf, strlen(t1_line_array) + strlen(t1_buf_array) + 1, T1_BUF_SIZE);
+         strcat(t1_buf_array, t1_line_array);
++        alloc_array(t1_line, strlen(t1_buf_array) + 1, T1_BUF_SIZE);
+         strcpy(t1_line_array, t1_buf_array);
+         t1_line_ptr = eol(t1_line_array);
+     }
+diff -Naur a/texk/web2c/luatexdir/image/pdftoepdf.w b/texk/web2c/luatexdir/image/pdftoepdf.w
+--- a/texk/web2c/luatexdir/image/pdftoepdf.w	2018-01-17 18:00:12.000000000 +0000
++++ b/texk/web2c/luatexdir/image/pdftoepdf.w	2018-10-09 01:52:01.648670875 +0100
+@@ -472,10 +472,10 @@
+         break;
+     */
+     case objString:
+-        copyString(pdf, obj->getString());
++        copyString(pdf, (GooString *)obj->getString());
+         break;
+     case objName:
+-        copyName(pdf, obj->getName());
++        copyName(pdf, (char *)obj->getName());
+         break;
+     case objNull:
+         pdf_add_null(pdf);
+diff -Naur a/texk/web2c/luatexdir/lua/lepdflib.cc b/texk/web2c/luatexdir/lua/lepdflib.cc
+--- a/texk/web2c/luatexdir/lua/lepdflib.cc	2018-02-14 14:44:38.000000000 +0000
++++ b/texk/web2c/luatexdir/lua/lepdflib.cc	2018-10-09 01:52:01.649670868 +0100
+@@ -674,7 +674,7 @@
+     uin = (udstruct *) luaL_checkudata(L, 1, M_##in);          \
+     if (uin->pd != NULL && uin->pd->pc != uin->pc)             \
+         pdfdoc_changed_error(L);                               \
+-    gs = ((in *) uin->d)->function();                          \
++    gs = (GooString *)((in *) uin->d)->function();             \
+     if (gs != NULL)                                            \
+         lua_pushlstring(L, gs->getCString(), gs->getLength()); \
+     else                                                       \
+@@ -1813,7 +1813,7 @@
+     if (uin->pd != NULL && uin->pd->pc != uin->pc)
+         pdfdoc_changed_error(L);
+     if (((Object *) uin->d)->isString()) {
+-        gs = ((Object *) uin->d)->getString();
++        gs = (GooString *)((Object *) uin->d)->getString();
+         lua_pushlstring(L, gs->getCString(), gs->getLength());
+     } else
+         lua_pushnil(L);
+diff -Naur a/texk/web2c/pdftexdir/writet1.c b/texk/web2c/pdftexdir/writet1.c
+--- a/texk/web2c/pdftexdir/writet1.c	2016-11-25 18:24:37.000000000 +0000
++++ b/texk/web2c/pdftexdir/writet1.c	2018-10-09 01:52:01.649670868 +0100
+@@ -1598,7 +1598,9 @@
+         *(strend(t1_buf_array) - 1) = ' ';
+ 
+         t1_getline();
++        alloc_array(t1_buf, strlen(t1_line_array) + strlen(t1_buf_array) + 1, T1_BUF_SIZE);
+         strcat(t1_buf_array, t1_line_array);
++        alloc_array(t1_line, strlen(t1_buf_array) + 1, T1_BUF_SIZE);
+         strcpy(t1_line_array, t1_buf_array);
+         t1_line_ptr = eol(t1_line_array);
+     }
+diff -Naur a/texk/web2c/ptexdir/ptex_version.h b/texk/web2c/ptexdir/ptex_version.h
+--- a/texk/web2c/ptexdir/ptex_version.h	2018-01-21 03:48:06.000000000 +0000
++++ b/texk/web2c/ptexdir/ptex_version.h	2018-10-09 01:52:01.649670868 +0100
+@@ -1 +1 @@
+-#define PTEX_VERSION "p3.8.0"
++#define PTEX_VERSION "p3.8.1"
+diff -Naur a/texk/web2c/ptexdir/tests/free_ixsp.tex b/texk/web2c/ptexdir/tests/free_ixsp.tex
+--- a/texk/web2c/ptexdir/tests/free_ixsp.tex	1970-01-01 01:00:00.000000000 +0100
++++ b/texk/web2c/ptexdir/tests/free_ixsp.tex	2018-10-09 01:52:01.649670868 +0100
+@@ -0,0 +1,53 @@
++%#!eptex -ini -etex
++\let\dump\relax
++\batchmode
++\input plain
++
++\errorstopmode
++\catcode`@=11
++\newcount\@tempcnta
++\newcount\@tempcntb
++\newcount\@tempcntc
++\mathchardef\LIM=256
++
++\def\MYCHAR#1{%
++  \@tempcntc=\numexpr7*#1+"101\relax
++  \@tempcnta=\@tempcntc\divide\@tempcnta 94
++  \@tempcntb=\numexpr\@tempcntc-94*\@tempcnta+1\relax
++  \ifnum\@tempcntb<0\advance\@tempcntb94 \advance\@tempcnta-1\fi
++  \advance\@tempcnta18 % 18区以降
++  \CNTA=\kuten\numexpr"100*\@tempcnta+\@tempcntb\relax
++}
++
++\newcount\CNT\newcount\CNTA
++\CNT=0
++\loop
++  \MYCHAR\CNT
++  \message{\the\CNT.}
++  \inhibitxspcode\CNTA=1\relax
++  \advance\CNT1\relax
++  \ifnum\CNT<\LIM
++\repeat
++
++\newcount\CNTB
++
++\loop
++  \MYCHAR\CNTB
++  \global\inhibitxspcode\CNTA=3
++{%
++\CNT=0
++\loop
++  \MYCHAR\CNT
++  \count@=\numexpr 1-\inhibitxspcode\CNTA\relax
++  \ifnum\count@=0\else\ifnum\CNTB=\CNT\else
++    \errmessage{<\the\CNTB, \the\CNT, \the\inhibitxspcode\CNTA>}\fi\fi
++  \advance\CNT1\relax
++  \ifnum\CNT<\LIM
++\repeat
++}
++  \MYCHAR\CNTB
++  \global\inhibitxspcode\CNTA=1\relax
++  \advance\CNTB1\relax
++  \ifnum\CNTB<\LIM
++\repeat
++\bye
+diff -Naur a/texk/web2c/ptexdir/tests/free_pena.tex b/texk/web2c/ptexdir/tests/free_pena.tex
+--- a/texk/web2c/ptexdir/tests/free_pena.tex	1970-01-01 01:00:00.000000000 +0100
++++ b/texk/web2c/ptexdir/tests/free_pena.tex	2018-10-09 01:52:01.649670868 +0100
+@@ -0,0 +1,52 @@
++%#!eptex -ini -etex
++\let\dump\relax
++\batchmode
++\input plain
++
++\errorstopmode
++\catcode`@=11
++\newcount\@tempcnta
++\newcount\@tempcntb
++\newcount\@tempcntc
++\mathchardef\LIM=256
++
++\def\MYCHAR#1{%
++  \@tempcntc=\numexpr7*#1+"101\relax
++  \@tempcnta=\@tempcntc\divide\@tempcnta 94
++  \@tempcntb=\numexpr\@tempcntc-94*\@tempcnta+1\relax
++  \ifnum\@tempcntb<0\advance\@tempcntb94 \advance\@tempcnta-1\fi
++  \advance\@tempcnta18 % 18区以降
++  \CNTA=\kuten\numexpr"100*\@tempcnta+\@tempcntb\relax
++}
++
++\newcount\CNT\newcount\CNTA
++\CNT=0
++\loop
++  \MYCHAR\CNT
++  \message{\the\CNT.}
++  \prebreakpenalty\CNTA=\numexpr\CNT+1\relax
++  \advance\CNT1\relax
++  \ifnum\CNT<\LIM
++\repeat
++
++\newcount\CNTB
++
++\loop
++  \MYCHAR\CNTB
++  \global\prebreakpenalty\CNTA=0
++{%
++\CNT=0
++\loop
++  \MYCHAR\CNT
++  \count@=\numexpr -\CNT-1+\prebreakpenalty\CNTA\relax
++  \ifnum\count@=0\else\ifnum\CNTB=\CNT\else\errmessage{<\the\CNTB, \the\CNT>}\fi\fi
++  \advance\CNT1\relax
++  \ifnum\CNT<\LIM
++\repeat
++}
++  \MYCHAR\CNTB
++  \global\prebreakpenalty\CNTA=\numexpr\CNTB+1\relax
++  \advance\CNTB1\relax
++  \ifnum\CNTB<\LIM
++\repeat
++\bye
diff --git a/gnu/packages/patches/texlive-bin-pdftex-poppler-compat.patch b/gnu/packages/patches/texlive-bin-pdftex-poppler-compat.patch
deleted file mode 100644
index eba4733f32..0000000000
--- a/gnu/packages/patches/texlive-bin-pdftex-poppler-compat.patch
+++ /dev/null
@@ -1,188 +0,0 @@
-Fix compatibility with Poppler 0.72.
-
-These files are taken from the upstream "poppler0.72.0.cc" variants and
-diffed against the "newpoppler" files from the 20180414 distribution.
-
-See revision 49336:
-https://tug.org/svn/texlive/trunk/Build/source/texk/web2c/pdftexdir/
-
---- a/texk/web2c/pdftexdir/pdftoepdf-newpoppler.cc	1970-01-01 01:00:00.000000000 +0100
-+++ b/texk/web2c/pdftexdir/pdftoepdf-newpoppler.cc	2018-12-09 21:14:58.479732695 +0100
-@@ -22,7 +22,7 @@
- https://git.archlinux.org/svntogit/packages.git/plain/texlive-bin/trunk
- by Arch Linux. A little modifications are made to avoid a crash for
- some kind of pdf images, such as figure_missing.pdf in gnuplot.
--The poppler should be 0.59.0 or newer versions.
-+The poppler should be 0.72.0 or newer versions.
- POPPLER_VERSION should be defined.
- */
- 
-@@ -120,7 +120,7 @@
- 
- static InObj *inObjList;
- static UsedEncoding *encodingList;
--static GBool isInit = gFalse;
-+static bool isInit = false;
- 
- // --------------------------------------------------------------------
- // Maintain list of open embedded PDF files
-@@ -317,7 +317,7 @@
-     pdf_puts("<<\n");
-     assert(r->type == objFont); // FontDescriptor is in fd_tree
-     for (i = 0, l = obj->dictGetLength(); i < l; ++i) {
--        key = obj->dictGetKey(i);
-+        key = (char *)obj->dictGetKey(i);
-         if (strncmp("FontDescriptor", key, strlen("FontDescriptor")) == 0
-             || strncmp("BaseFont", key, strlen("BaseFont")) == 0
-             || strncmp("Encoding", key, strlen("Encoding")) == 0)
-@@ -427,7 +427,7 @@
-         charset = fontdesc.dictLookup("CharSet");
-         if (!charset.isNull() &&
-             charset.isString() && is_subsetable(fontmap))
--            epdf_mark_glyphs(fd, (char *)charset.getString()->getCString());
-+            epdf_mark_glyphs(fd, (char *)charset.getString()->c_str());
-         else
-             embed_whole_font(fd);
-         addFontDesc(fontdescRef.getRef(), fd);
-@@ -454,7 +454,7 @@
-     for (i = 0, l = obj->dictGetLength(); i < l; ++i) {
-         fontRef = obj->dictGetValNF(i);
-         if (fontRef.isRef())
--            copyFont(obj->dictGetKey(i), &fontRef);
-+            copyFont((char *)obj->dictGetKey(i), &fontRef);
-         else if (fontRef.isDict()) {   // some programs generate pdf with embedded font object
-             copyName((char *)obj->dictGetKey(i));
-             pdf_puts(" ");
-@@ -566,7 +566,7 @@
-         pdf_printf("%s", convertNumToPDF(obj->getNum()));
-     } else if (obj->isString()) {
-         s = (GooString *)obj->getString();
--        p = s->getCString();
-+        p = (char *)s->c_str();
-         l = s->getLength();
-         if (strlen(p) == (unsigned int) l) {
-             pdf_puts("(");
-@@ -664,7 +664,7 @@
-                     ("PDF inclusion: CID fonts are not supported"
-                      " (try to disable font replacement to fix this)");
-             }
--            if ((s = ((Gfx8BitFont *) r->font)->getCharName(i)) != 0)
-+            if ((s = (char *)((Gfx8BitFont *) r->font)->getCharName(i)) != 0)
-                 glyphNames[i] = s;
-             else
-                 glyphNames[i] = notdef;
-@@ -683,7 +683,7 @@
- }
- 
- // get the pagebox according to the pagebox_spec
--static PDFRectangle *get_pagebox(Page * page, int pagebox_spec)
-+static const PDFRectangle *get_pagebox(Page * page, int pagebox_spec)
- {
-     if (pagebox_spec == pdfboxspecmedia)
-         return page->getMediaBox();
-@@ -715,7 +715,7 @@
- {
-     PdfDocument *pdf_doc;
-     Page *page;
--    PDFRectangle *pagebox;
-+    const PDFRectangle *pagebox;
- #ifdef POPPLER_VERSION
-     int pdf_major_version_found, pdf_minor_version_found;
- #else
-@@ -724,8 +724,8 @@
-     // initialize
-     if (!isInit) {
-         globalParams = new GlobalParams();
--        globalParams->setErrQuiet(gFalse);
--        isInit = gTrue;
-+        globalParams->setErrQuiet(false);
-+        isInit = true;
-     }
-     // open PDF file
-     pdf_doc = find_add_document(image_name);
-@@ -849,7 +849,7 @@
-     pageObj = xref->fetch(pageRef->num, pageRef->gen);
-     pageDict = pageObj.getDict();
-     rotate = page->getRotate();
--    PDFRectangle *pagebox;
-+    const PDFRectangle *pagebox;
-     // write the Page header
-     pdf_puts("/Type /XObject\n");
-     pdf_puts("/Subtype /Form\n");
-@@ -977,7 +977,7 @@
-             }
-             l = dic1.getLength();
-             for (i = 0; i < l; i++) {
--                groupDict.dictAdd(copyString(dic1.getKey(i)),
-+                groupDict.dictAdd((const char *)copyString(dic1.getKey(i)),
-                                   dic1.getValNF(i));
-             }
- // end modification
-@@ -1001,14 +1001,14 @@
-         pdf_puts("/Resources <<\n");
-         for (i = 0, l = obj1->dictGetLength(); i < l; ++i) {
-             obj2 = obj1->dictGetVal(i);
--            key = obj1->dictGetKey(i);
-+            key = (char *)obj1->dictGetKey(i);
-             if (strcmp("Font", key) == 0)
-                 copyFontResources(&obj2);
-             else if (strcmp("ProcSet", key) == 0)
-                 copyProcSet(&obj2);
-             else
--                copyOtherResources(&obj2, key);
-+                copyOtherResources(&obj2, (char *)key);
-         }
-         pdf_puts(">>\n");
-     }
-
---- a/texk/web2c/pdftexdir/pdftosrc-newpoppler.cc	1970-01-01 01:00:00.000000000 +0100
-+++ b/texk/web2c/pdftexdir/pdftosrc-newpoppler.cc	2018-12-09 21:14:58.479732695 +0100
-@@ -20,7 +20,7 @@
- /*
- This is based on the patch texlive-poppler-0.59.patch <2017-09-19> at
- https://git.archlinux.org/svntogit/packages.git/plain/texlive-bin/trunk
--by Arch Linux. The poppler should be 0.59.0 or newer versions.
-+by Arch Linux. The poppler should be 0.72.0 or newer versions.
- POPPLER_VERSION should be defined.
- */
- 
-@@ -109,7 +109,7 @@
-             fprintf(stderr, "No SourceName found\n");
-             exit(1);
-         }
--        outname = (char *)srcName.getString()->getCString();
-+        outname = (char *)srcName.getString()->c_str();
-         // We cannot free srcName, as objname shares its string.
-         // srcName.free();
-     } else if (objnum > 0) {
-@@ -118,7 +118,7 @@
-             fprintf(stderr, "Not a Stream object\n");
-             exit(1);
-         }
--        sprintf(buf, "%s", fileName->getCString());
-+        sprintf(buf, "%s", fileName->c_str());
-         if ((p = strrchr(buf, '.')) == 0)
-             p = strchr(buf, 0);
-         if (objgen == 0)
-@@ -128,7 +128,7 @@
-         outname = buf;
-     } else {                    // objnum < 0 means we are extracting the XRef table
-         extract_xref_table = true;
--        sprintf(buf, "%s", fileName->getCString());
-+        sprintf(buf, "%s", fileName->c_str());
-         if ((p = strrchr(buf, '.')) == 0)
-             p = strchr(buf, 0);
-         sprintf(p, ".xref");
-@@ -173,9 +173,9 @@
- 
-                 // parse the header: object numbers and offsets
-                 objStr.streamReset();
--                str = new EmbedStream(objStr.getStream(), Object(objNull), gTrue, first);
-+                str = new EmbedStream(objStr.getStream(), Object(objNull), true, first);
-                 lexer = new Lexer(xref, str);
--                parser = new Parser(xref, lexer, gFalse);
-+                parser = new Parser(xref, lexer, false);
-                 for (n = 0; n < nObjects; ++n) {
-                     obj1 = parser->getObj();
-                     obj2 = parser->getObj();
-
diff --git a/gnu/packages/patches/texlive-bin-xetex-poppler-compat.patch b/gnu/packages/patches/texlive-bin-xetex-poppler-compat.patch
deleted file mode 100644
index cac716cc59..0000000000
--- a/gnu/packages/patches/texlive-bin-xetex-poppler-compat.patch
+++ /dev/null
@@ -1,31 +0,0 @@
-Fix compatibility with Poppler 0.72.
-
-Patch taken from upstream:
-https://tug.org/svn/texlive/trunk/Build/source/texk/web2c/xetexdir/pdfimage.cpp?r1=44964&r2=48969&diff_format=u
-
---- a/texk/web2c/xetexdir/pdfimage.cpp	2017/08/06 07:12:02	44964
-+++ b/texk/web2c/xetexdir/pdfimage.cpp	2018/10/22 04:01:42	48969
-@@ -82,19 +82,19 @@
- 	switch (pdf_box) {
- 		default:
- 		case pdfbox_crop:
--			r = page->getCropBox();
-+			r = (PDFRectangle *)page->getCropBox();
- 			break;
- 		case pdfbox_media:
--			r = page->getMediaBox();
-+			r = (PDFRectangle *)page->getMediaBox();
- 			break;
- 		case pdfbox_bleed:
--			r = page->getBleedBox();
-+			r = (PDFRectangle *)page->getBleedBox();
- 			break;
- 		case pdfbox_trim:
--			r = page->getTrimBox();
-+			r = (PDFRectangle *)page->getTrimBox();
- 			break;
- 		case pdfbox_art:
--			r = page->getArtBox();
-+			r = (PDFRectangle *)page->getArtBox();
- 			break;
- 	}
diff --git a/gnu/packages/tex.scm b/gnu/packages/tex.scm
index 5b29937672..e90e64a6ad 100644
--- a/gnu/packages/tex.scm
+++ b/gnu/packages/tex.scm
@@ -102,21 +102,23 @@
        (base32
         "0khyi6h015r2zfqgg0a44a2j7vmr1cy42knw7jbss237yvakc07y"))
       (patches
-       (list
-        ;; This is required for compatibility with Poppler 0.64.0 and to fix a
-        ;; segmentation fault in dvipdfm-x from XeTeX, and also contains a fix
-        ;; for CVE-2018-17407.
-        (origin
-          (method url-fetch)
-          (uri (string-append "http://www.linuxfromscratch.org/patches/blfs/"
-                              "svn/texlive-" version "-source-upstream_fixes-2.patch"))
-          (file-name "texlive-poppler-compat.patch")
-          (sha256
-           (base32
-            "04sxy1qv9y575mxwyg3y7rx7mh540pfjqx7yni7ncb5wjbq9pq1a")))
-        (search-patch "texlive-bin-luatex-poppler-compat.patch")
-        (search-patch "texlive-bin-pdftex-poppler-compat.patch")
-        (search-patch "texlive-bin-xetex-poppler-compat.patch")))))
+       (let ((arch-patch
+              (lambda (name revision hash)
+                (origin
+                  (method url-fetch)
+                  (uri (string-append "https://git.archlinux.org/svntogit/packages.git"
+                                      "/plain/trunk/" name "?h=packages/texlive-bin"
+                                      "&id=" revision))
+                  (file-name (string-append "texlive-bin-" name))
+                  (sha256 (base32 hash)))))
+             (arch-revision "e1975bce0b9d270d7c9773c5beb7e87d61ee8f57"))
+         (append (search-patches  "texlive-bin-CVE-2018-17407.patch"
+                                  "texlive-bin-luatex-poppler-compat.patch")
+                 (list
+                  (arch-patch "pdftex-poppler0.72.patch" arch-revision
+                              "0p46b6xxxg2s3hx67r0wpz16g3qygx65hpc581xs3jz5pvsiq3y7")
+                  (arch-patch "xetex-poppler-fixes.patch" arch-revision
+                              "1jj1p5zkjljb7id9pjv29cw0cf8mwrgrh4ackgzz9c200vaqpsvx")))))))
    (build-system gnu-build-system)
    (inputs
     `(("texlive-extra-src" ,texlive-extra-src)
@@ -195,9 +197,9 @@
             #t))
         (add-after 'unpack 'use-code-for-new-poppler
           (lambda _
-            (copy-file "texk/web2c/pdftexdir/pdftoepdf-newpoppler.cc"
+            (copy-file "texk/web2c/pdftexdir/pdftoepdf-poppler0.72.0.cc"
                        "texk/web2c/pdftexdir/pdftoepdf.cc")
-            (copy-file "texk/web2c/pdftexdir/pdftosrc-newpoppler.cc"
+            (copy-file "texk/web2c/pdftexdir/pdftosrc-poppler0.72.0.cc"
                        "texk/web2c/pdftexdir/pdftosrc.cc")
             #t))
         (add-after 'unpack 'disable-failing-test
-- 
cgit v1.2.3


From 3eed550072d6f71eff20de269d313fc1dfe3e332 Mon Sep 17 00:00:00 2001
From: Marius Bakke <mbakke@fastmail.com>
Date: Mon, 1 Apr 2019 00:03:36 +0200
Subject: gnu: Remove gtk+/fixed.

The merge preceding this commit ignored the replacement part of commit
bc91562939ee002e84c95d13c907482b6d1e9339.  This commit removes the remaining
bits, as the patch is already included in GTK3 since version 3.24.3.

* gnu/packages/patches/gtk3-fix-deprecation-macro-use.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/gtk.scm (gtk+/fixed): Remove variable.
---
 gnu/local.mk                                       |  1 -
 gnu/packages/gtk.scm                               | 12 ----------
 .../patches/gtk3-fix-deprecation-macro-use.patch   | 28 ----------------------
 3 files changed, 41 deletions(-)
 delete mode 100644 gnu/packages/patches/gtk3-fix-deprecation-macro-use.patch

(limited to 'gnu/local.mk')

diff --git a/gnu/local.mk b/gnu/local.mk
index c6cacd7ada..1332efdcff 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -876,7 +876,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/gtk2-respect-GUIX_GTK2_PATH.patch	\
   %D%/packages/patches/gtk2-respect-GUIX_GTK2_IM_MODULE_FILE.patch \
   %D%/packages/patches/gtk2-theme-paths.patch			\
-  %D%/packages/patches/gtk3-fix-deprecation-macro-use.patch	\
   %D%/packages/patches/gtk3-respect-GUIX_GTK3_PATH.patch	\
   %D%/packages/patches/gtk3-respect-GUIX_GTK3_IM_MODULE_FILE.patch \
   %D%/packages/patches/gtkglext-disable-disable-deprecated.patch \
diff --git a/gnu/packages/gtk.scm b/gnu/packages/gtk.scm
index 7527abbbac..6e63ca6614 100644
--- a/gnu/packages/gtk.scm
+++ b/gnu/packages/gtk.scm
@@ -822,18 +822,6 @@ application suites.")
            (variable "GUIX_GTK3_PATH")
            (files '("lib/gtk-3.0")))))))
 
-;; Fixes a bug in Gtk that causes crashes in IceCat and Emacs.
-;; See <https://bugs.gnu.org/34454>, <https://bugs.gnu.org/34658>,
-;; and <https://gitlab.gnome.org/GNOME/gtk/issues/1523>.
-(define gtk+/fixed
-  (package
-    (inherit gtk+)
-    (source (origin
-              (inherit (package-source gtk+))
-              (patches
-               (cons (search-patch "gtk3-fix-deprecation-macro-use.patch")
-                     (origin-patches (package-source gtk+))))))))
-
 ;;;
 ;;; Guile bindings.
 ;;;
diff --git a/gnu/packages/patches/gtk3-fix-deprecation-macro-use.patch b/gnu/packages/patches/gtk3-fix-deprecation-macro-use.patch
deleted file mode 100644
index e933555ffb..0000000000
--- a/gnu/packages/patches/gtk3-fix-deprecation-macro-use.patch
+++ /dev/null
@@ -1,28 +0,0 @@
-Copied from <https://gitlab.gnome.org/GNOME/gtk/commit/e3a1593a>.
-Fixes upstream bugs <https://gitlab.gnome.org/GNOME/gtk/issues/1523>
-and <https://gitlab.gnome.org/GNOME/gtk/issues/1280>.
-
-diff --git a/gdk/x11/gdkwindow-x11.c b/gdk/x11/gdkwindow-x11.c
-index 97ada6d73919fba3dfe192dd66929e90bc7677bb..764e39495f7edb0c3efe41cca25b8bee4778887d 100644
---- a/gdk/x11/gdkwindow-x11.c
-+++ b/gdk/x11/gdkwindow-x11.c
-@@ -2985,6 +2985,7 @@ gdk_window_x11_set_background (GdkWindow      *window,
-   double r, g, b, a;
-   cairo_surface_t *surface;
-   cairo_matrix_t matrix;
-+  cairo_pattern_t *parent_relative_pattern;
- 
-   if (GDK_WINDOW_DESTROYED (window))
-     return;
-@@ -2997,8 +2998,10 @@ gdk_window_x11_set_background (GdkWindow      *window,
-     }
- 
- G_GNUC_BEGIN_IGNORE_DEPRECATIONS
--  if (pattern == gdk_x11_get_parent_relative_pattern ())
-+  parent_relative_pattern = gdk_x11_get_parent_relative_pattern ();
- G_GNUC_END_IGNORE_DEPRECATIONS
-+
-+  if (pattern == parent_relative_pattern)
-     {
-       GdkWindow *parent;
- 
-- 
cgit v1.2.3


From c531fad7a0b528be68c8bd1b5749a4d01c5bfdd1 Mon Sep 17 00:00:00 2001
From: Efraim Flashner <efraim@flashner.co.il>
Date: Thu, 4 Apr 2019 22:15:04 +0300
Subject: gnu: flac: Fix CVE-2017-6888.

* gnu/packages/xiph.scm (flac)[replacement]: New field.
(flac/fixed): New variable.
* gnu/packages/patches/flac-CVE-2017-6888.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
---
 gnu/local.mk                                  |  1 +
 gnu/packages/patches/flac-CVE-2017-6888.patch | 29 +++++++++++++++++++++++++++
 gnu/packages/xiph.scm                         | 11 +++++++++-
 3 files changed, 40 insertions(+), 1 deletion(-)
 create mode 100644 gnu/packages/patches/flac-CVE-2017-6888.patch

(limited to 'gnu/local.mk')

diff --git a/gnu/local.mk b/gnu/local.mk
index 1332efdcff..ac7531af03 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -771,6 +771,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/findutils-localstatedir.patch		\
   %D%/packages/patches/findutils-makedev.patch			\
   %D%/packages/patches/findutils-test-xargs.patch		\
+  %D%/packages/patches/flac-CVE-2017-6888.patch		\
   %D%/packages/patches/flann-cmake-3.11.patch			\
   %D%/packages/patches/flint-ldconfig.patch			\
   %D%/packages/patches/foomatic-filters-CVE-2015-8327.patch	\
diff --git a/gnu/packages/patches/flac-CVE-2017-6888.patch b/gnu/packages/patches/flac-CVE-2017-6888.patch
new file mode 100644
index 0000000000..d2583201b4
--- /dev/null
+++ b/gnu/packages/patches/flac-CVE-2017-6888.patch
@@ -0,0 +1,29 @@
+https://git.xiph.org/?p=flac.git;a=patch;h=4f47b63e9c971e6391590caf00a0f2a5ed612e67
+
+From 4f47b63e9c971e6391590caf00a0f2a5ed612e67 Mon Sep 17 00:00:00 2001
+From: Erik de Castro Lopo <erikd@mega-nerd.com>
+Date: Sat, 8 Apr 2017 18:34:49 +1000
+Subject: [PATCH] stream_decoder.c: Fix a memory leak
+
+Leak reported by Secunia Research.
+---
+ src/libFLAC/stream_decoder.c | 3 +++
+ 1 file changed, 3 insertions(+)
+
+diff --git a/src/libFLAC/stream_decoder.c b/src/libFLAC/stream_decoder.c
+index 14d5fe7f..a5527511 100644
+--- a/src/libFLAC/stream_decoder.c
++++ b/src/libFLAC/stream_decoder.c
+@@ -1753,6 +1753,9 @@ FLAC__bool read_metadata_vorbiscomment_(FLAC__StreamDecoder *decoder, FLAC__Stre
+ 					}
+ 					memset (obj->comments[i].entry, 0, obj->comments[i].length) ;
+ 					if (!FLAC__bitreader_read_byte_block_aligned_no_crc(decoder->private_->input, obj->comments[i].entry, obj->comments[i].length)) {
++						/* Current i-th entry is bad, so we delete it. */
++						free (obj->comments[i].entry) ;
++						obj->comments[i].entry = NULL ;
+ 						obj->num_comments = i;
+ 						goto skip;
+ 					}
+-- 
+2.11.0
+
diff --git a/gnu/packages/xiph.scm b/gnu/packages/xiph.scm
index 43b0d2723a..49d23bf6d5 100644
--- a/gnu/packages/xiph.scm
+++ b/gnu/packages/xiph.scm
@@ -5,7 +5,7 @@
 ;;; Copyright © 2014 Sree Harsha Totakura <sreeharsha@totakura.in>
 ;;; Copyright © 2014 Mark H Weaver <mhw@netris.org>
 ;;; Copyright © 2015 Paul van der Walt <paul@denknerd.org>
-;;; Copyright © 2015, 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2015, 2016, 2017, 2019 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2017, 2018 Marius Bakke <mbakke@fastmail.com>
 ;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
 ;;; Copyright © 2018 Leo Famulari <leo@famulari.name>
@@ -235,6 +235,7 @@ It currently supports:
 (define flac
   (package
    (name "flac")
+   (replacement flac/fixed)
    (version "1.3.2")
    (source (origin
             (method url-fetch)
@@ -256,6 +257,14 @@ meaning that audio is compressed in FLAC without any loss in quality.")
                                "See COPYING in the distribution.")) ; and LGPL and GPL
    (home-page "https://xiph.org/flac/")))
 
+(define flac/fixed
+  (package
+    (inherit flac)
+    (source
+      (origin
+        (inherit (package-source flac))
+        (patches (search-patches "flac-CVE-2017-6888.patch"))))))
+
 (define libkate
   (package
    (name "libkate")
-- 
cgit v1.2.3


From b979028527add840175336b8f7b165caf60ec793 Mon Sep 17 00:00:00 2001
From: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Date: Mon, 1 Apr 2019 22:39:45 -0400
Subject: gnu: Add python-robotframework.

* gnu/packages/python-xyz.scm (python-robotframework): New variable.
* gnu/packages/patches/python-robotframework-honor-source-date-epoch.patch:
Add patch.
* gnu/local.mk (dist_patch_DATA): Register it.
---
 gnu/local.mk                                       |  1 +
 ...on-robotframework-honor-source-date-epoch.patch | 62 ++++++++++++++++++++++
 gnu/packages/python-xyz.scm                        | 45 ++++++++++++++++
 3 files changed, 108 insertions(+)
 create mode 100644 gnu/packages/patches/python-robotframework-honor-source-date-epoch.patch

(limited to 'gnu/local.mk')

diff --git a/gnu/local.mk b/gnu/local.mk
index a3cfee9649..5c03066853 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -1206,6 +1206,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/python-pycrypto-CVE-2013-7459.patch	\
   %D%/packages/patches/python2-pygobject-2-gi-info-type-error-domain.patch \
   %D%/packages/patches/python-pygpgme-fix-pinentry-tests.patch	\
+  %D%/packages/patches/python-robotframework-honor-source-date-epoch.patch \
   %D%/packages/patches/python2-subprocess32-disable-input-test.patch	\
   %D%/packages/patches/python-unittest2-python3-compat.patch	\
   %D%/packages/patches/python-unittest2-remove-argparse.patch	\
diff --git a/gnu/packages/patches/python-robotframework-honor-source-date-epoch.patch b/gnu/packages/patches/python-robotframework-honor-source-date-epoch.patch
new file mode 100644
index 0000000000..ccd87911d8
--- /dev/null
+++ b/gnu/packages/patches/python-robotframework-honor-source-date-epoch.patch
@@ -0,0 +1,62 @@
+From 3cc41c05fad5601c0dd1832f64a6e9efca017727 Mon Sep 17 00:00:00 2001
+From: Maxim Cournoyer <maxim.cournoyer@gmail.com>
+Date: Mon, 1 Apr 2019 11:36:04 -0400
+Subject: [PATCH] robottime: Honor the SOURCE_DATE_EPOCH environment variable.
+
+Honoring the SOURCE_DATE_EPOCH environment variable allows building
+the documentation using libdoc reproducibly, by setting the generated
+timestamp to a fixed value.
+
+For more background on reproducible builds and the SOURCE_DATE_EPOCH
+environment variable, see:
+https://reproducible-builds.org/specs/source-date-epoch/.
+
+* src/robot/utils/robottime.py: import `os'.
+(TimestampCache._get_epoch): Retrieve date from SOURCE_DATE_EPOCH if
+it is defined, otherwise from time.time().
+* utest/output/test_logger.py (TestLogger.test_write_to_one_logger):
+Check for the existance of a timestamp attribute instead of checking
+for its content as the later is easy to break when using the
+SOURCE_DATE_EPOCH environment variable.
+---
+ src/robot/utils/robottime.py | 3 +++
+ utest/output/test_logger.py  | 2 +-
+ 2 files changed, 4 insertions(+), 1 deletion(-)
+
+diff --git a/src/robot/utils/robottime.py b/src/robot/utils/robottime.py
+index 06432a4a6..91526f826 100644
+--- a/src/robot/utils/robottime.py
++++ b/src/robot/utils/robottime.py
+@@ -14,6 +14,7 @@
+ #  limitations under the License.
+ 
+ import datetime
++import os
+ import time
+ import re
+ 
+@@ -395,6 +396,8 @@ class TimestampCache(object):
+ 
+     # Seam for mocking
+     def _get_epoch(self):
++        if os.getenv('SOURCE_DATE_EPOCH'):
++            return float(os.getenv('SOURCE_DATE_EPOCH'))
+         return time.time()
+ 
+     def _use_cache(self, secs, *separators):
+diff --git a/utest/output/test_logger.py b/utest/output/test_logger.py
+index 92fe6d77d..e980227aa 100644
+--- a/utest/output/test_logger.py
++++ b/utest/output/test_logger.py
+@@ -46,7 +46,7 @@ class TestLogger(unittest.TestCase):
+         logger = LoggerMock(('Hello, world!', 'INFO'))
+         self.logger.register_logger(logger)
+         self.logger.write('Hello, world!', 'INFO')
+-        assert_true(logger.msg.timestamp.startswith('20'))
++        assert_true(hasattr(logger.msg, 'timestamp'))
+ 
+     def test_write_to_one_logger_with_trace_level(self):
+         logger = LoggerMock(('expected message', 'TRACE'))
+-- 
+2.20.1
+
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm
index bebb7c5cb2..efc36662e0 100644
--- a/gnu/packages/python-xyz.scm
+++ b/gnu/packages/python-xyz.scm
@@ -2752,6 +2752,51 @@ designed to be used by Robot Framework and tools and libraries in its
 ecosystem, but can naturally be used also by other projects.")
     (license license:asl2.0)))
 
+(define-public python-robotframework
+  (package
+    (name "python-robotframework")
+    (version "3.1.1")
+    ;; There are no tests in the PyPI archive.
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/robotframework/robotframework.git")
+             (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32
+         "1aaiamc9l35m5sf7xl2qc5q9308v7sz3p1qgzcslsjxzddphyn4v"))
+       (patches (search-patches
+                 "python-robotframework-honor-source-date-epoch.patch"))))
+    (build-system python-build-system)
+    (arguments
+     `(#:phases (modify-phases %standard-phases
+                  (add-before 'build 'build-and-install-doc
+                    (lambda* (#:key outputs #:allow-other-keys)
+                      (let* ((doc-output (assoc-ref outputs "doc"))
+                             (doc (string-append doc-output "/share/"
+                                                 ,name "-" ,version "/")))
+                        (invoke "invoke" "library-docs" "all")
+                        (mkdir-p doc)
+                        (copy-recursively "doc/libraries"
+                                          (string-append doc "/libraries"))
+                        #t)))
+                  (replace 'check
+                    (lambda _
+                      (invoke "python" "utest/run.py"))))))
+    (native-inputs
+     `(("python-invoke" ,python-invoke)
+       ("python-rellu" ,python-rellu)
+       ("python:tk" ,python "tk")))     ;used when building the HTML doc
+    (outputs '("out" "doc"))
+    (home-page "https://robotframework.org")
+    (synopsis "Generic automation framework")
+    (description "Robot Framework is a generic automation framework for
+acceptance testing, acceptance test driven development (ATDD), and robotic
+process automation (RPA).")
+    (license license:asl2.0)))
+
 (define-public python-scp
   (package
     (name "python-scp")
-- 
cgit v1.2.3