From f00ed436535e9e5840ca85ec4cf5df6547528db7 Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus <rekado@elephly.net>
Date: Thu, 27 Jan 2022 22:13:57 +0100
Subject: gnu: pigx-sars-cov2-ww: Fix Python module capture.

The build system expects all Python modules to be on PYTHONPATH.

* gnu/packages/bioinformatics.scm (pigx-sars-cov2-ww)[arguments]: Set
PYTHONPATH variable in new build phase.
---
 gnu/packages/bioinformatics.scm | 5 ++++-
 1 file changed, 4 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 93be974f1f..dbacb4f1f5 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -11209,7 +11209,10 @@ based methods.")
        (modify-phases %standard-phases
          (add-before 'bootstrap 'autoreconf
            (lambda _
-             (invoke "autoreconf" "-vif"))))))
+             (invoke "autoreconf" "-vif")))
+         (add-before 'configure 'set-PYTHONPATH
+           (lambda _
+             (setenv "PYTHONPATH" (getenv "GUIX_PYTHONPATH")))))))
     (native-inputs
      (list automake autoconf))
     (inputs
-- 
cgit v1.2.3