From cc1dbea883fed7515130144a2413c49c11c5352f Mon Sep 17 00:00:00 2001 From: zimoun Date: Fri, 21 May 2021 22:26:17 +0200 Subject: gnu: r-annotationfilter: Move to (gnu packages bioconductor). * gnu/packages/bioinformatics.scm (r-annotationfilter): Move from here... * gnu/packages/bioconductor.scm (r-annotationfilter): ...to here. --- gnu/packages/bioconductor.scm | 26 ++++++++++++++++++++++++++ gnu/packages/bioinformatics.scm | 26 -------------------------- 2 files changed, 26 insertions(+), 26 deletions(-) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index faa464d5b7..a6d0350da9 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2009,6 +2009,32 @@ microarrays.") annotation data packages using SQLite data storage.") (license license:artistic2.0))) +(define-public r-annotationfilter + (package + (name "r-annotationfilter") + (version "1.14.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "AnnotationFilter" version)) + (sha256 + (base32 + "0npk0laa2rc93rsh6yikj886zf2fl53a050j07fj9w67j0q0h3s9")))) + (properties + `((upstream-name . "AnnotationFilter"))) + (build-system r-build-system) + (propagated-inputs + `(("r-genomicranges" ,r-genomicranges) + ("r-lazyeval" ,r-lazyeval))) + (native-inputs + `(("r-knitr" ,r-knitr))) + (home-page "https://github.com/Bioconductor/AnnotationFilter") + (synopsis "Facilities for filtering Bioconductor annotation resources") + (description + "This package provides classes and other infrastructure to implement +filters for manipulating Bioconductor annotation resources. The filters are +used by @code{ensembldb}, @code{Organism.dplyr}, and other packages.") + (license license:artistic2.0))) + (define-public r-annotationforge (package (name "r-annotationforge") diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 24973d3cb4..c144344dc7 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -8203,32 +8203,6 @@ package, and for letting R applications work on datasets that are larger than the available RAM.") (license license:artistic2.0))) -(define-public r-annotationfilter - (package - (name "r-annotationfilter") - (version "1.14.0") - (source (origin - (method url-fetch) - (uri (bioconductor-uri "AnnotationFilter" version)) - (sha256 - (base32 - "0npk0laa2rc93rsh6yikj886zf2fl53a050j07fj9w67j0q0h3s9")))) - (properties - `((upstream-name . "AnnotationFilter"))) - (build-system r-build-system) - (propagated-inputs - `(("r-genomicranges" ,r-genomicranges) - ("r-lazyeval" ,r-lazyeval))) - (native-inputs - `(("r-knitr" ,r-knitr))) - (home-page "https://github.com/Bioconductor/AnnotationFilter") - (synopsis "Facilities for filtering Bioconductor annotation resources") - (description - "This package provides classes and other infrastructure to implement -filters for manipulating Bioconductor annotation resources. The filters are -used by @code{ensembldb}, @code{Organism.dplyr}, and other packages.") - (license license:artistic2.0))) - (define-public emboss (package (name "emboss") -- cgit v1.2.3