From 730ac9ab85b4a7662558d5158b1a7e02afdd65c3 Mon Sep 17 00:00:00 2001 From: Hong Li Date: Tue, 29 Mar 2022 07:03:15 +0000 Subject: gnu: Add r-stager. * gnu/packages/bioconductor.scm (r-stager): New variable. Signed-off-by: Ricardo Wurmus --- gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index ffa38fda3a..ce1e23f0bf 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -4739,6 +4739,29 @@ events and allows for the incorporation of prior knowledge through supervised graph construction.") (license license:artistic2.0))) +(define-public r-stager + (package + (name "r-stager") + (version "1.16.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "stageR" version)) + (sha256 + (base32 "0vpx0v04hgkhzi0bm7ipnb9xr37n5wvnnr45lljgni8pwabfkf6y")))) + (properties `((upstream-name . "stageR"))) + (build-system r-build-system) + (propagated-inputs (list r-summarizedexperiment)) + (native-inputs (list r-knitr)) + (home-page "https://bioconductor.org/packages/stageR") + (synopsis "Stage-wise analysis of high throughput gene expression data") + (description + "The stageR package allows automated stage-wise analysis of +high-throughput gene expression data. The method is published in Genome +Biology at +@url{https://genomebiology.biomedcentral.com/articles/10.1186/s13059-017-1277-0}.") + (license license:gpl3))) + (define-public r-stringdb (package (name "r-stringdb") -- cgit v1.2.3