From 5143f3852d7a2df6867b2f6bdd2d421c05825e31 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 7 Sep 2021 12:01:10 +0200 Subject: gnu: Add r-biobtreer. * gnu/packages/bioconductor.scm (r-biobtreer): New variable. --- gnu/packages/bioconductor.scm | 27 +++++++++++++++++++++++++++ 1 file changed, 27 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 7fb0a7520e..7ad5a19f02 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -13861,6 +13861,33 @@ data download from Bgee database, and TopAnat analysis: GO-like enrichment of anatomical terms, mapped to genes by expression patterns.") (license license:gpl3))) +(define-public r-biobtreer + (package + (name "r-biobtreer") + (version "1.4.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "biobtreeR" version)) + (sha256 + (base32 + "0pynx4ps1qxsn13ba6zyg6h5dqlp2y7qish67m7sdjns079zh061")))) + (properties `((upstream-name . "biobtreeR"))) + (build-system r-build-system) + (propagated-inputs + `(("r-httpuv" ,r-httpuv) + ("r-httr" ,r-httr) + ("r-jsonlite" ,r-jsonlite) + ("r-stringi" ,r-stringi))) + (native-inputs `(("r-knitr" ,r-knitr))) + (home-page "https://github.com/tamerh/biobtreeR") + (synopsis "Use biobtree tool from R") + (description + "The biobtreeR package provides an interface to biobtree, a tool which +covers large sets of bioinformatics datasets and allows search and chain +mappings functionalities.") + (license license:expat))) + (define-public r-tximeta (package (name "r-tximeta") -- cgit v1.2.3