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* gnu: clojure: Update to 1.11.1.r0man2022-07-23
| | | | | | | | | | | | | | | | | | | | | | | | | | This patch updates Clojure to 1.11.1. It also adds the 'reset-class-timestamps phase to the Clojure build system. This phase makes sure the timestamp of compiled class files is set to a later point in time than the timestamp of the corresponding Clojure source files. If the timestamps of the class and source files are the same, the Clojure compiler will compile the sources again which can lead to issues. This problem has been discussed here [1]. The suggested solution was to keep/adjust the timestamps of the class files. [1] https://www.mail-archive.com/clojure@googlegroups.com/msg99928.html * gnu/packages/clojure.scm (clojure): Update to 1.11.1 and update all of LIBRARIES accordingly. [arguments]: In 'unpack-library-sources' phase, copy from "core-specs-alpha-src" and "spec-alpha-src" as well. Add phases 'closure-spec-skip-macros', 'clojure-spec-compile', 'maven-classpath-properties', and 'reset-class-timestamps'. * guix/build/clojure-build-system.scm (regular-jar-file?) (reset-class-timestamps): New procedures. (%standard-phases): Add 'reset-class-timestamps' phase. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* guix gc: '--delete-generations' now deletes old Home generations.Ludovic Courtès2022-07-23
| | | | | | | | | | Previously, 'guix gc -d4m' would ignore Home generations. With this change, they are treated like profiles and generations that match the pattern are deleted. * guix/scripts/gc.scm (guix-gc)[delete-generations]: Add call to 'home-generation-base'. * doc/guix.texi (Invoking guix gc): Document the change.
* deploy: Honor '--dry-run'.Ludovic Courtès2022-07-23
| | | | | | * guix/scripts/deploy.scm (%options): Add "dry-run". (show-what-to-deploy): Add #:dry-run? and honor it. (guix-deploy): Honor --dry-run.
* import: Enable recursive import for texlive packages.Ricardo Wurmus2022-07-19
| | | | | | | | | | | | | * guix/import/texlive.scm (tlpdb->package): Add VERSION argument; include explicit version field in output. (texlive->guix-package): Set default value for VERSION argument; adjust call of tlpdb->package. (texlive-recursive-import): Accept REPO and VERSION keyword arguments. * guix/import/utils.scm (package->definition): Add a clause to deal with output from tlpdb->package. * guix/scripts/import/texlive.scm (%options): Add "recursive" option. (guix-import-texlive): Honor "recursive" option. * doc/guix.texi (Using TeX and LaTeX): Mention "recursive" option.
* system: Add -I, --list-installed option.Antero Mejr2022-07-19
| | | | | | | | | | | | | * guix/scripts/system.scm (display-system-generation): Add #:list-installed-regex and honor it. (list-generations): Likewise. (show-help, %options): Add "--list-installed". (process-command): For 'describe' and 'list-generation', honor the 'list-installed option. * doc/guix.texi (Invoking Guix System): Add information for --list-installed flag. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* home: Add -I, --list-installed option.Antero Mejr2022-07-19
| | | | | | | | | | | | | | | * guix/scripts/package.scm (list-installed): New procedure. * guix/scripts/home.scm (%options, show-help): Add '--list-installed'. (process-command): For 'describe' and 'list-generations', honor the 'list-installed option. (display-home-environment-generation): Add #:list-installed-regex and honor it. (list-generations): Likewise. * guix/scripts/utils.scm (pretty-print-table): New argument "left-pad". * doc/guix.texi (Invoking Guix Home): Add information and example for --list-installed flag. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* upstream: Sort '%updaters' alphabetically.Ludovic Courtès2022-07-19
| | | | | | | | | | Previously the output of 'guix refresh --list-updaters' would be non-deterministic, and likewise the order in which updaters are tried would be non-deterministic. Reported by zimoun <zimon.toutoune@gmail.com>. * guix/upstream.scm (%updaters): Add call to 'sort'.
* import: pypi: Fix coding style.Hartmut Goebel2022-07-15
| | | | | | | I missed this remark from the review when pushing the last change. * guix/import/pypi.scm(python->package-name): Replace the trailing '#t'-case by a 'else'.
* import: pypi: Add special treatment for Tryton package names,Hartmut Goebel2022-07-15
| | | | | | | | | | | | | | | | | | | | Trytond modules are Python packages, and treated like this in guix. Anyhow, since they are add-ons for the “Trytond“ application, their guix package name do not get the "python-" prefix like other Python modules, (see also https://issues.guix.gnu.org/46057#1). This change disables adding the "python-" prefix to the guix package name for Trytond modules when importing and updating, thus inhibiting irritating messages like in this example: $ guix refresh -u trytond-party … trytond-party: consider adding this propagated input: python-trytond-country trytond-party: consider removing this propagated input: trytond-country Handling this special case seems appropriate since (as of now) there are about 165 packages for Trytond and the number is growing. * guix/import/pypi.scm(python->package-name): Don't add "python-" prefix for trytond packages.
* import: egg: Fix updater.Hartmut Goebel2022-07-15
| | | | | | | | | 'egg-source-url' did not return the URL, but the quoted expression. This did break the updater, which expects the URL as a string. * guix/import/egg.scm(egg-source-url): Remove. (egg->guix-package)[egg-content]: Use quoted expression directly. (latest-release): Call egg-uri instead of egg-source-url.
* monad-repl: Add "build", "lower", and "verbosity" commands.Ludovic Courtès2022-07-15
| | | | | | | | | | | | | | | | Fixes <https://issues.guix.gnu.org/56114>. Reported by Maxime Devos <maximedevos@telenet.be>. * guix/monad-repl.scm (%build-verbosity): New variable. (evaluate/print-with-store): New procedure. (run-in-store): Rewrite in terms of 'evaluate/print-with-store'. (verbosity, lower, build): New meta-commands. * doc/guix.texi (Using Guix Interactively): New node. (The Store Monad): Link to it. (Invoking guix repl): Likewise. * doc/contributing.texi (Running Guix Before It Is Installed): Refer to it. (The Perfect Setup): Suggest 'guix install' rather than 'guix package -i'.
* shell: Ignore cached profiles when using '--export-manifest'.Ludovic Courtès2022-07-15
| | | | | | | | | | Fixes <https://issues.guix.gnu.org/56539>. Fixes a bug where "guix shell -D pkg --export-manifest" would provide the expansion of PKG's dependencies instead of a call to 'package-development-manifest' if that profile happened to be cached. * guix/scripts/shell.scm (profile-cached-gc-root): Add clause for 'export-manifest?.
* style: Gracefully handle failure to locate a source file.Ludovic Courtès2022-07-12
| | | | | * guix/scripts/style.scm (absolute-location): Raise an error when 'search-path' returns #f.
* import: github: Use correct URL scheme.Hartmut Goebel2022-07-11
| | | | | | | | | | This effects packages hosted at github with source-uri like …/releases/download/REPO-VERSION/REPO-VERSION.EXT. E.g. ‘guix refresh udisks’ would fail to find the new release of ‘udisks’ before this change. * guix/import/github.scm(updated-url): For one one of the cases add missing 'prefix' and set new version.
* monads: Add 'mparameterize'.Ludovic Courtès2022-07-10
| | | | | | | * etc/system-tests.scm (mparameterize): Move to... * guix/monads.scm (mparameterize): ... here. * tests/monads.scm ("mparameterize"): New test. * .dir-locals.el (c-mode): Add it.
* channels: Emit version 3 profiles.Ludovic Courtès2022-07-08
| | | | | | | | | | | | | | | | | Fixes <https://issues.guix.gnu.org/56441>. Reported by zimoun <zimon.toutoune@gmail.com>. Fixes a bug introduced in 4ff12d1de7cd617b791996ee7ca1240660b4c20e with version 4 of the manifest format. A new 'guix time-machine' would create a v4 manifest; when targeting an old revision (v3), 'generate-package-cache' would fail to read that manifest and abort. Furthermore, an old Guix living in a new profile with a v4 manifest would be unable to describe itself via (guix describe). * guix/channels.scm (package-cache-file): Add 'format-version' field to PROFILE. (channel-instances->derivation): Pass #:format-version to 'profile-derivation'.
* profiles: Support the creation of profiles with version 3 manifests.Ludovic Courtès2022-07-08
| | | | | | | | | | | | * guix/profiles.scm (%manifest-format-version): New variable. (manifest->gexp): Add optional 'format-version' parameter. [optional, entry->gexp]: Honor it. (profile-derivation): Add #:format-version parameter and honor it. (<profile>)[format-version]: New field. (profile-compiler): Honor it. * guix/build/profiles.scm (manifest-sexp->inputs+search-paths): Support both versions 3 and 4. Remove unused 'properties' variable. * tests/profiles.scm ("profile-derivation format version 3"): New test.
* profiles: Remove support for reading versions 0 and 1.Ludovic Courtès2022-07-08
| | | | | | | | | | Version 2 was introduced in commit dedb17ad010ee9ef67f3f4f3997dd17f226c8090 (May 2015), which made it into Guix 0.9.0. * guix/profiles.scm (find-package): Remove. (sexp->manifest)[infer-search-paths]: Remove. Remove clauses for versions 0 and 1.
* guix: inferior: Fix the behaviour of open-inferior #:error-port.Christopher Baines2022-07-08
| | | | | | | | | | | I'm looking at this as the Guix Data Service uses this behaviour to record and display logs from inferior processes. * guix/inferior.scm (open-bidirectional-pipe): Call dup2 for file descriptor 2, passing either the file number for the current error port, or a file descriptor for /dev/null. * tests/inferior.scm ("#:error-port stderr", "#:error-port pipe"): Add two new tests that cover some of the #:error-port behaviour.
* style: For 'let' and similar forms, emit one binding per line.Ludovic Courtès2022-07-04
| | | | | | | | | | | | | | | | | | Previously, 'let' bindings could be rendered like this: (let ((x 1) (y 2) (z 3)) ...) With this change, each bindings goes in its own line. Partly fixes <https://issues.guix.gnu.org/56297>. Reported by Maxime Devos <maximedevos@telenet.be>. * guix/scripts/style.scm (pretty-print-with-comments)[list-of-lists?]: New procedure. Use it. * tests/style.scm: Add tests with 'let' and 'substitute-keyword-arguments'.
* style: Add option '--list-stylings'.base-for-series-12975Hartmut Goebel2022-07-04
| | | | | | * guix/scripts/style.scm (show-stylings): New procedure. (%options, show-help): Add "--list-stylings". * doc/guix.texi (Invoking guix style): Document "-l".
* challenge: Do nothing when passed zero arguments.Ludovic Courtès2022-07-03
| | | | | | | | | | Previously, 'guix challenge' without arguments would list live store items that had been locally built. This was deemed confusing, especially since 'list-live' is an expensive operation. * guix/scripts/challenge.scm (guix-challenge): Warn and exit with 0 when FILES is empty. * doc/guix.texi (Invoking guix challenge): Update accordingly.
* profiles: Do not repeat entries in 'manifest' file.Ludovic Courtès2022-07-01
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Fixes <https://issues.guix.gnu.org/55499>. Reported by Ricardo Wurmus <rekado@elephly.net>. With this change, the manifest file created for: guix install r r-seurat r-cistopic r-monocle3 r-cicero-monocle3 r-assertthat goes from 5.7M to 176K. Likewise, on this profile, wall-clock time of: GUIX_PROFILING=gc guix package -I goes from 0.7s to 0.1s, with heap usage going from 55M to 9M. * guix/profiles.scm (manifest->gexp)[optional]: New procedure. [entry->gexp]: Turn into a monadic procedure. Return a 'repeated' sexp if ENTRY was already visited before. Adjust caller accordingly. Bump manifest version. (sexp->manifest)[sexp->manifest-entry]: Turn into a monadic procedure. Add case for 'repeated' nodes. Add each entry to the current state vhash. Add clause for version 4 manifests. [sexp->manifest-entry/v3]: New procedure, with former 'sexp->manifest-entry' code. * tests/profiles.scm ("deduplication of repeated entries"): New test. * guix/build/profiles.scm (manifest-sexp->inputs+search-paths)[let-fields]: New macro. Use it. Expect version 4. Add clause for 'repeated' nodes.
* upstream: 'guix refresh -u' no longer stops when upstream info is lacking.Ludovic Courtès2022-07-01
| | | | | | | | | | Fixes <https://issues.guix.gnu.org/56338>. Starting from 53b9c27aa59bebf955f0aa24fef60a101480ef5c, 'guix refresh -u' would stop upon the first failure to determine upstream releases. This fixes that. * guix/upstream.scm (package-update): Warn rather than update.
* substitute: Use SRFI-71 instead of SRFI-11.Ludovic Courtès2022-06-26
| | | | | | * guix/scripts/substitute.scm (display-narinfo-data) (open-connection-for-uri/cached) (process-substitution): Use SRFI-71 instead of SRFI-11.
* status: Relay "updating substitutes" messages.Ludovic Courtès2022-06-26
| | | | | | | | | | | | | Until now, those messages would be accumulated and displayed all at once, when a '\n' was finally emitted by 'guix substitute'. In the meantime, clients would remain silent. * guix/status.scm (bytevector-index): Change 'number' parameter to 'numbers' and adjust accordingly. (build-event-output-port): Pass both #\newline and #\return to 'bytevector-index'. * tests/status.scm ("build-output-port, daemon messages with LF"): New test.
* self: 'guix-daemon' wrapper refers to the right Guile.Ludovic Courtès2022-06-26
| | | | | | | Partly fixes <https://issues.guix.gnu.org/56030>. Reported by Julien Lepiller <julien@lepiller.eu>. * guix/self.scm (whole-package)[wrap]: Pass #:guile to 'program-file'.
* build-system/dub: Don't expect ‘.dub/dub.json’.(2022-06-19
| | | | | | | | | This file is no longer produced by our version of Dub. * guix/build/dub-build-system.scm (build, check): Remove obsolete substitutions. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
* build-system/dub: Fix configure docstring indentation.(2022-06-19
| | | | | | * guix/build/dub-build-system.scm (configure): Reflow docstring. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
* build-system/dub: Use the gold linker.(2022-06-19
| | | | | | | | | * guix/build-system/dub.scm (default-ld-gold-wrapper): New procedure. (lower): Add a LD-GOLD-WRAPPER to the keyword arguments, and to the resulting bag's… [build-inputs]: …build inputs. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
* build-system/dub: Don't explicitly return #t from phases.(2022-06-19
| | | | | | | * guix/build/dub-build-system.scm (configure, build, check, install): Remove trailing #t. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
* utils: Define 'target-x86?' predicate.Denis 'GNUtoo' Carikli2022-06-24
| | | | | | * guix/utils.scm (target-x86?): New predicate. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
* guix system: Inline menu-entries in to bootcfg in perform-action.Christopher Baines2022-06-23
| | | | | | | This avoids an exception when generating images, where the reading of boot parameters fails. * guix/scripts/system.scm (perform-action): Inline menu-entries in to bootcfg.
* refresh: Repurpose '-L' for '--load-path'.Ludovic Courtès2022-06-22
| | | | | | | | | | | This incompatible change fixes an inconsistency with other commands where '-L' is short for '--load-path'. * guix/scripts/refresh.scm (%options): Add --load-path option from %STANDARD-BUILD-OPTIONS. Remove #\L shortcut for --list-updaters, and remove --load-path option that lacked the #\L shortcut. (show-help): Update accordingly. * doc/guix.texi (Invoking guix refresh): Update accordingly.
* style: Keep values next to their keyword.Ludovic Courtès2022-06-22
| | | | | | | | | This ensures we print '#:key value' rather than insert a newline between '#:key' and 'value' as was the case before. * guix/scripts/style.scm (pretty-print-with-comments)[print-sequence]: When ITEM is a keyword, loop with FIRST? = true. * tests/style.scm: Add test.
* build-system: chicken: Add version information to eggs if missing.Michal Atlas2022-06-21
| | | | | | | | | | | Chicken eggs do not always contain version information, yet dependant packages often rely on this information being present. Thus, add a version field if it is missing. * guix/build/chicken-build-system.scm (stamp-egg-version): New variable. (%standard-phases): Add ‘stamp-egg-version’. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
* challenge: Colorize output.Ludovic Courtès2022-06-19
| | | | | * guix/scripts/challenge.scm (good-news, bad-news): New procedures. (summarize-report, summarize-report-list): Use them and 'highlight'.
* guix: self: Do not record reference to gcc-toolchain.Julien Lepiller2022-06-18
| | | | | | | | The ld-wrapper from gcc-toolchain records a reference to the library path through rpath, but this is not needed. By explicitely using rpath flags instead, we save 150 MB of closure. * guix/self.scm (quiet-guile): Do not record reference to gcc-toolchain.
* guix: emacs-utils: Add emacs-header-parse.Fredrik Salomonsson2022-06-17
| | | | | | | | | | * guix/build/emacs-utils.scm (emacs-header-parse): New procedure. * tests/build-emacs-utils.scm ("emacs-header-parse: fetch version", "emacs-header-parse: fetch keywords", "emacs-header-parse: fetch nonexistent author"): New tests. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* guix: emacs-utils: Add emacs-batch-script.Fredrik Salomonsson2022-06-17
| | | | | | | | | | * guix/build/emacs-utils.scm (emacs-batch-script): New procedure. * tests/build-emacs-utils.scm: New file. * Makefile.am (TESTS): Add `tests/build-emacs-utils.scm'. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* guix: Modernize renpy-build-system.Liliana Marie Prikler2022-06-17
| | | | | | * guix/build-system/renpy.scm (build): Drop trailing #t. (install, install-desktop-file): Likewise. Also add inputs and use search-input-file for /bin/sh and /bin/renpy.
* ui: Improve pager selection logic when less is not installed.Taiju HIGASHI2022-06-16
| | | | | | | | | | | | | | | | * guix/ui.scm (find-available-pager): New procedure. (call-with-paginated-output-port): Use it. * guix/utils.scm (call-with-environment-variables): Allow clearing of specified environment variables. * tests/ui.scm (make-empty-file, assert-equals-find-available-pager): New procedures. ("find-available-pager, GUIX_PAGER takes precedence") ("find-available-pager, PAGER takes precedence") ("find-available-pager, 'less' takes precedence") ("find-available-pager, 'more' takes precedence") ("find-available-pager, no pager"): New tests. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* shell: Fix '--export-manifest' for cached profiles and when '-p' is used.Ludovic Courtès2022-06-16
| | | | | | | | Fixes <https://issues.guix.gnu.org/55521>. * guix/scripts/shell.scm (export-manifest): When computing 'manifest', honor the 'profile key. * tests/guix-shell-export-manifest.sh: Add test.
* shell: Do not auto-detect manifest when '-p' is used.Ludovic Courtès2022-06-16
| | | | | | | | Previous, "guix shell -p /path/to/profile" would have manifest/guix.scm auto-detection turned on. * guix/scripts/shell.scm (auto-detect-manifest)[options-contain-payload?]: Return #t for 'profile.
* packages: Change the order of %SUPPORTED-SYSTEMS.Ludovic Courtès2022-06-16
| | | | | | | | | Commit 2a34333d0c238fa0983659ea71f0e1af4ff0ac7b led to a couple of test failures in tests/packages.scm and tests/lint.scm due to the different ordering. * guix/packages.scm (%supported-systems): Move %64BIT-SUPPORTED-SYSTEMS first.
* channels: Print backtrace when generating package cache fails.Josselin Poiret2022-06-16
| | | | | | | * guix/channels.scm (package-cache-file): Add a throw handler around the generate-package-cache call, and print backtrace in it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* upstream: 'package-update' reports "unknown upstream releases" errors.Ludovic Courtès2022-06-15
| | | | | | | | | | Fixes <https://issues.guix.gnu.org/55987>. Reported by John Kehayias <john.kehayias@protonmail.com>. * guix/upstream.scm (package-update): Instead of calling 'package-latest-release*', call 'package-latest-release' and distinguish between "up-to-date" and "unknown upstream releases". Raise an error in the latter case.
* refresh: Switch to SRFI-71.Ludovic Courtès2022-06-15
| | | | | * guix/scripts/refresh.scm (update-package): Use SRFI-71 'let' instead of SRFI-11 'let-values'.
* challenge: When using '--diff', do not attempt to chmod symlinks.Ludovic Courtès2022-06-15
| | | | | | | This is a followup to 2a2856d5ccd9a9b7df8a94333a277b971a39b150. * guix/scripts/challenge.scm (make-directory-writable): Do not call 'make-file-writable' on symlinks.
* import: Add hex.pm importer.Hartmut Goebel2022-06-15
| | | | | | | | | | | | | hex.pm is a package repository for Erlang and Elixir. * guix/scripts/import.scm (importers): Add "hexpm". * guix/scripts/import/hexpm.scm, guix/import/hexpm.scm, guix/hexpm-download.scm: New files. * guix/import/utils.scm (source-spec->object): Add "hexpm-fetch" to list of fetch methods. * guix/upstream.scm (package-update/hexpm-fetch): New function. (%method-updates) Add it. * Makefile.am: Add them.
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