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* channels: 'latest-channel-instance' authenticates Git checkouts.Ludovic Courtès2020-06-16
| | | | | | | | | | | | | | | | | | | | | | Fixes <https://bugs.gnu.org/22883>. * guix/channels.scm (<channel>)[introduction]: New field. (<channel-introduction>): New record type. (%guix-channel-introduction): New variable. (%default-channels): Use it. (<channel-metadata>)[keyring-reference]: New field. (%default-keyring-reference): New variable. (read-channel-metadata, read-channel-metadata-from-source): Initialize the 'keyring-reference' field. (commit-short-id, verify-introductory-commit) (authenticate-channel): New procedures. (latest-channel-instance): Call 'authenticate-channel' when CHANNEL has an introduction. * tests/channels.scm (gpg+git-available?, commit-id-string): New procedures. ("authenticate-channel, wrong first commit signer"): ("authenticate-channel, .guix-authorizations"): New tests. * doc/guix.texi (Invoking guix pull): Mention authentication.
* tests: Move OpenPGP helpers to (guix tests gnupg).Ludovic Courtès2020-06-16
| | | | | | | | * tests/git-authenticate.scm (key-id): Remove. (%ed25519-public-key-file, %ed25519-secret-key-file) (%ed25519bis-public-key-file, %ed25519bis-secret-key-file) (read-openpgp-packet, key-fingerprint): Move to... * guix/tests/gnupg.scm: ... here.
* git-authenticate: 'authenticate-commits' takes a #:keyring parameter.Ludovic Courtès2020-06-16
| | | | | * guix/git-authenticate.scm (authenticate-commits): Add #:keyring parameter.
* git-authenticate: Cache takes a key parameter.Ludovic Courtès2020-06-16
| | | | | | | | * guix/git-authenticate.scm (authenticated-commit-cache-file) (cache-authenticated-commit, previously-authenticated-commits): Add 'key' parameter and honor it. * build-aux/git-authenticate.scm (git-authenticate): Pass "channels/guix" as the key.
* build-system: cmake: Add substitutable keyword.Efraim Flashner2020-06-16
| | | | | * guix/build-system/cmake.scm (cmake-build, cmake-cross-build): Add substitutable keyword.
* pack: Add zstd compressor.Tobias Geerinckx-Rice2020-06-16
| | | | | * guix/scripts/pack.scm (%compressors): Add zstd. * doc/guix.texi (Invoking guix pack): Document it.
* ui: Use package-description-string.Arun Isaac2020-06-15
| | | | | * guix/ui.scm (package->recutils): Use package-description-string instead of package-description and P_.
* ui: Do not translate package synopsis a second time.Arun Isaac2020-06-15
| | | | | * guix/ui.scm (package->recutils): package-synopsis-string already returns a translated string. Do not attempt to translate it again.
* ui: Cut off search early if any regexp does not match.Arun Isaac2020-06-15
| | | | | * guix/ui.scm (relevance): When one of the regexps does not match, cut off early and return 0. Do not try to match the remaining regexps.
* ci: Add build-products id field and export accessors.Mathieu Othacehe2020-06-15
| | | | | | | * guix/ci.scm (build-product?, build-product-id, build-product-type, build-product-file-size, build-product-path): Export them, [id]: new field.
* ci: Add status option to "latest-builds".Mathieu Othacehe2020-06-15
| | | | * guix/ci.scm (latest-builds): Add "status" option.
* download: Remove usa-mirror.go-parts.com mirror.Tobias Geerinckx-Rice2020-06-15
| | | | | | It incorrectly redirects 404s (at least) to the commercial home page. * guix/download.scm (%mirrors): Remove usa-mirror.go-parts.com URLs.
* ci: Fix buildproducts reading.Mathieu Othacehe2020-06-15
| | | | | | | This is a follow-up of 4e05bbb093a17145fcabd48ea1d2c9cd7559084d. * guix/ci.scm (<build>)[products]: Test for vector type, as products can be "null".
* ci: Add job option to "latest-builds".Mathieu Othacehe2020-06-15
| | | | * guix/ci.scm (latest-builds): Add "job" option.
* ci: Add build products support.Mathieu Othacehe2020-06-15
| | | | | * guix/ci.scm (<build-product>): New json mapping, (<build)[products]: new field.
* guix repl: Add script execution.Konrad Hinsen2020-06-14
| | | | | | | | | * guix/scripts/repl.scm: Add filename options for script execution. * doc/guix.texi (Invoking guix repl): Document it. * tests/guix-repl.sh: Test it. * Makefile.am: (SH_TESTS): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* scripts: system: Fix "init" command.Mathieu Othacehe2020-06-14
| | | | | | | | This is a follow-up of 7ca533c7237622d70b423033c4506217d9ce4014. The introduced "target" variable is shadowing the target argument. * guix/scripts/system.scm (perform-action): Rename "target" variable to "target*".
* lint: Add 'check-for-collisions' checker.Ludovic Courtès2020-06-14
| | | | | | | | | | | | Suggested by Edouard Klein <edk@beaver-labs.com>. * guix/profiles.scm (check-for-collisions): Export. * guix/lint.scm (check-profile-collisions): New procedure. (%local-checkers): Add 'profile-collisions' checker. * tests/lint.scm ("profile-collisions: no warnings") ("profile-collisions: propagated inputs collide") ("profile-collisions: propagated inputs collide, store items"): New tests. * doc/guix.texi (Invoking guix lint): Document it.
* profiles: Fix pathological performance of 'manifest-transitive-entries'.Ludovic Courtès2020-06-14
| | | | | | | | | | | | | | For packages with lots of propagated inputs, 'manifest-transitive-entries', as called from 'check-for-collisions', would exhibit pathological behavior. For example, "guix install cl-ana" wouldn't complete in 1mn; now, it's down to 20s. The issue was that manifest entries would never be 'equal?' due to the delayed field in <manifest-entry>. * guix/profiles.scm (manifest-transitive-entries): Use a vhash instead of a set. Use 'manifest-entry=?' instead of 'equal?' when checking for equality.
* ui: Set 'LESS' environment variable unconditionally.Ludovic Courtès2020-06-14
| | | | | | | | Fixes <https://bugs.gnu.org/41811>. Reported by Lars-Dominik Braun <lars@6xq.net>. * guix/ui.scm (call-with-paginated-output-port): Remove (getenv "LESS") call.
* Merge branch 'staging'Marius Bakke2020-06-13
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| * Merge branch 'master' into stagingMarius Bakke2020-06-11
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| * \ Merge branch 'master' into stagingMarius Bakke2020-06-08
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| * \ \ Merge branch 'master' into stagingMarius Bakke2020-06-06
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| * \ \ \ Merge branch 'master' into stagingMarius Bakke2020-05-29
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| * \ \ \ \ Merge branch 'master' into stagingMarius Bakke2020-05-26
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| * \ \ \ \ \ Merge branch 'master' into stagingMarius Bakke2020-05-26
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| * \ \ \ \ \ \ Merge branch 'master' into stagingMarius Bakke2020-05-26
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| * \ \ \ \ \ \ \ Merge branch 'master' into stagingJakub Kądziołka2020-04-29
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| * | | | | | | | | build-system/go: Allow providing additional build flagsJakub Kądziołka2020-04-08
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * guix/build-system/go.scm (build-flags): New argument. * guix/build/go-build-system.scm (build): Use apply to pass the additional arguments to invoke.
| * | | | | | | | | Merge branch 'master' into stagingJakub Kądziołka2020-03-29
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| * | | | | | | | | | cargo-build-system: Accept a #:features argumentJakub Kądziołka2020-03-23
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * guix/build/cargo-build-system.scm (build, install): Pass the features to cargo. (check): Remove indirection layer for consistency with build and install. * guix/build-system/cargo.scm (cargo-build): New argument; pass it into the builder. * gnu/packages/rust-apps.scm (ripgrep): Use the new argument instead of a custom phase.
* | | | | | | | | | | image: Make 'find-image' non-monadic.Jan (janneke) Nieuwenhuizen2020-06-13
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/system/image.scm (find-image): Make non-monadic. Add 'target' parameter. * gnu/tests/install.scm (run-install): Update caller, passing (%current-target-system). * guix/scripts/system.scm (perform-action): Likewise.
* | | | | | | | | | | guix: Update to Bioconductor 3.11.Ricardo Wurmus2020-06-13
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * guix/build-system/r.scm (bioconductor-uri): Use new URL. * guix/import/cran.scm (%bioconductor-version): Update to 3.11.
* | | | | | | | | | | lint: check-patch-file-names: Use origin-actual-file-name.Christopher Baines2020-06-12
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This avoids crashes for the patch-file-names checker where a <origin> is used for a patch, but without a value for the file-name field. This is currently the case with the bash package. * guix/lint.scm (check-patch-file-names): Change origin-file-name to origin-actual-file-name.
* | | | | | | | | | | git-authenticate: Disallow SHA1 (and MD5) signatures.Ludovic Courtès2020-06-12
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * guix/git-authenticate.scm (commit-signing-key): Add #:disallowed-hash-algorithms and honor it. (authenticate-commit)[recent-commit?]: New variable. Pass #:disallowed-hash-algorithms to 'commit-signing-key'. * tests/git-authenticate.scm ("signed commits, SHA1 signature"): New test.
* | | | | | | | | | | download: Add more apache mirrors.Efraim Flashner2020-06-12
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * guix/download.scm (%mirrors): Add more apache mirrors.
* | | | | | | | | | | guix: lint: Support origins in check-patch-file-names.Chris Marusich2020-06-11
| |_|_|_|_|_|_|_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * guix/lint.scm (check-patch-file-names)[starts-with-package-name?]: New procedure, extracted from the existing logic. Using it, add a clause to the match-lambda to handle origin records.
* | | | | | | | | | packages: 'package-grafts' returns grafts for all the relevant outputs.Ludovic Courtès2020-06-11
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Fixes <https://bugs.gnu.org/41796>. Reported by Jakub Kądziołka <kuba@kadziolka.net>. * guix/packages.scm (input-graft): Add 'output' parameter and honor it. Add OUTPUT to the cache key. (input-cross-graft): Likewise. (fold-bag-dependencies): Operate on inputs instead of nodes. Turn VISITED into a vhash instead of a set. Pass PROC HEAD and OUTPUT instead of just HEAD. (bag-grafts): Adjust accordingly. * tests/packages.scm ("package-grafts, dependency on several outputs"): New test.
* | | | | | | | | | database: separate transaction-handling and retry-handling.Caleb Ristvedt2020-06-10
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Previously call-with-transaction would both retry when SQLITE_BUSY errors were thrown and do what its name suggested (start and rollback/commit a transaction). This changes it to do only what its name implies, which simplifies its implementation. Retrying is provided by the new call-with-SQLITE_BUSY-retrying procedure. * guix/store/database.scm (call-with-transaction): no longer restarts, new #:restartable? argument controls whether "begin" or "begin immediate" is used. (call-with-SQLITE_BUSY-retrying, call-with-retrying-transaction, call-with-retrying-savepoint): new procedures. (register-items): use call-with-retrying-transaction to preserve old behavior. * .dir-locals.el (call-with-retrying-transaction, call-with-retrying-savepoint): add indentation information.
* | | | | | | | | | database: ensure update-or-insert is run within a transactionCaleb Ristvedt2020-06-10
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | update-or-insert can break if an insert occurs between when it decides whether to update or insert and when it actually performs that operation. Putting the check and the update/insert operation in the same transaction ensures that the update/insert will only succeed if no other write has occurred in the middle. * guix/store/database.scm (call-with-savepoint): new procedure. (update-or-insert): use call-with-savepoint to ensure the read and the insert/update occur within the same transaction.
* | | | | | | | | | database: rewrite query procedures in terms of with-statement.Caleb Ristvedt2020-06-10
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Most of our queries would fail to finalize their statements properly if sqlite returned an error during their execution. This resolves that, and also makes them somewhat more concise as a side-effect. This also makes some small changes to improve certain queries where behavior was strange or overly verbose. * guix/store/database.scm (call-with-statement): new procedure. (with-statement): new macro. (last-insert-row-id, path-id, update-or-insert, add-references): rewrite to use with-statement. (update-or-insert): factor last-insert-row-id out of the end of both branches. (add-references): remove pointless last-insert-row-id call. * .dir-locals.el (with-statement): add indenting information.
* | | | | | | | | | database: work around guile-sqlite3 bug preventing statement resetCaleb Ristvedt2020-06-10
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | guile-sqlite3 provides statement caching, making it unnecessary for sqlite to keep re-preparing statements that are frequently used. Unfortunately it doesn't quite emulate the semantics of sqlite_finalize properly, because it doesn't cause a commit if the statement being finalized is the last "active" statement (see https://notabug.org/guile-sqlite3/guile-sqlite3/issues/12). We work around this by wrapping sqlite-finalize with our own version that ensures sqlite-reset is called, which does The Right Thing™. * guix/store/database.scm (sqlite-finalize): new procedure that shadows the sqlite-finalize from (sqlite3).
* | | | | | | | | | import: stackage: Fix typo.Tobias Geerinckx-Rice2020-06-09
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * guix/import/stackage.scm (latest-lts-release): Fix spelling of ‘if’.
* | | | | | | | | | import: stackage: Fix typo.Marius Bakke2020-06-09
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * guix/import/stackage.scm (latest-lts-release): Fix spelling of "included".
* | | | | | | | | | store: Use buffered I/O for all protocol writesLars-Dominik Braun2020-06-09
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * guix/store.scm (run-gc) Use buffered output port. (export-path) Same. (add-file-tree-to-store) Same. (set-build-options): Same. Add explicit flush. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* | | | | | | | | | git-authenticate: 'commit-authorized-keys' properly handles orphan commits.Ludovic Courtès2020-06-09
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Previously it would trigger a wrong-number-of-arguments error for 'lset-intersection'. * guix/git-authenticate.scm (commit-authorized-keys): Add case for when 'commit-parents' returns the empty list.
* | | | | | | | | | git: 'commit-difference' really excludes the ancestors of #:excluded.Ludovic Courtès2020-06-09
| |_|_|_|_|_|_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * guix/git.scm (commit-difference): Initialize VISITED to the closure of OLD and EXCLUDED, as written in the docstring. * tests/git.scm ("commit-difference, excluded commits"): Adjust accordingly.
* | | | | | | | | syscalls: set-thread-name, thread-name: Fix thinko.Jan (janneke) Nieuwenhuizen2020-06-08
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * guix/build/syscalls.scm (set-thread-name, thread-name): Oops, fix thinko.
* | | | | | | | | syscalls: set-thread-name, thread-name: Stub for the Hurd.Jan (janneke) Nieuwenhuizen2020-06-08
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Avoid crash Backtrace: guix/build/syscalls.scm:405:8: In procedure prctl: Function not implemented because of missing prctl on the Hurd. * guix/build/syscalls.scm (set-thread-name, thread-name): Rename to ... (set-thread-name!/linux,thread-name/linux): ...this. (set-thread-name, thread-name): Swtich between linux implementation and or stub.
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