| Commit message (Collapse) | Author | Age |
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Fixes a bug whereby 'guix pull' would fail with this guix-extra.drv
build failure:
ice-9/eval.scm:163:9: ERROR:
1. &formatted-message:
format: "~a: patch not found\n"
arguments: ("nettle-3.5-check-_pkcs1_sec_decrypt-msg-len.patch")
Reported by ekaitz on #guix.
Regression introduced in 3b1a12c5bff5a0c108284d19a6982bdf663bbceb.
* guix/import/texlive.scm: Autoload (gnu packages tex).
fixlet
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* guix/import/texlive.scm (fetch-sxml, sxml->package): Remove procedures.
(tlpdb-file, tlpdb, files->directories, tlpdb->package): New procedures.
(string->license): Add case for lpplgpl license combination.
(guix-name): Remove COMPONENT argument.
(texlive->guix-package): Use new procedures.
(texlive-recursive-import): New procedure.
* guix/scripts/import/texlive.scm (show-help, %options): Remove --archive
option.
(guix-import-texlive): Adjust call of texlive->guix-package.
* doc/guix.texi (Invoking guix import): Update documentation.
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* guix/svn-download.scm (download-multi-svn-to-store): New procedure.
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* guix/build/syscalls.scm (PR_SET_CHILD_SUBREAPER): New variable.
(set-child-subreaper!): New procedure.
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This procedure had been semi-deprecated since 2014, starting with commit
21b679f6944f4e1f09f949322f5242b761dc22a7!
* guix/derivations.scm (build-expression->derivation): Define using
'define-deprecated'.
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* guix/build-system/go.scm (go-cross-build): Remove 'store', 'native-drvs'
and 'target-drvs'; add 'source', 'build-inputs', 'target-inputs', and
'host-inputs'. Change default value of #:phases.
[builder]: Rewrite as a gexp.
Rewrite body to call 'gexp->derivation' instead of
'build-expression->derivation'.
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Files smaller than 8 KiB typically represent ~70% of the entries in
/gnu/store/.links but only contribute to ~4% of the space savings
afforded by deduplication.
Not considering these files for deduplication speeds up file insertion
in the store and, more importantly, leaves 'removeUnusedLinks' with
fewer entries to traverse, thereby speeding it up proportionally.
Partly fixes <https://issues.guix.gnu.org/24937>.
* config-daemon.ac: Remove symlink hard link check and CAN_LINK_SYMLINK
definition.
* guix/store/deduplication.scm (%deduplication-minimum-size): New
variable.
(deduplicate)[loop]: Do not recurse when FILE's size is below
%DEDUPLICATION-MINIMUM-SIZE.
(dump-port): New procedure.
(dump-file/deduplicate)[hash]: Turn into...
[dump-and-compute-hash]: ... this thunk.
Call 'deduplicate' only when SIZE is greater than
%DEDUPLICATION-MINIMUM-SIZE; otherwise call 'dump-port'.
* nix/libstore/gc.cc (LocalStore::removeUnusedLinks): Drop files where
st.st_size < deduplicationMinSize.
* nix/libstore/local-store.hh (deduplicationMinSize): New declaration.
* nix/libstore/optimise-store.cc (deduplicationMinSize): New variable.
(LocalStore::optimisePath_): Return when PATH is a symlink or smaller
than 'deduplicationMinSize'.
* tests/derivations.scm ("identical files are deduplicated"): Produce
files bigger than %DEDUPLICATION-MINIMUM-SIZE.
* tests/nar.scm ("restore-file-set with directories (signed, valid)"):
Likewise.
* tests/store-deduplication.scm ("deduplicate, below %deduplication-minimum-size"):
New test.
("deduplicate", "deduplicate, ENOSPC"): Produce files bigger than
%DEDUPLICATION-MINIMUM-SIZE.
* tests/store.scm ("substitute, deduplication"): Likewise.
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* guix/tests.scm (file=?): Add optional 'stat' parameter. Add fast
patch comparing inode numbers.
* tests/gexp.scm ("imported-files with file-like objects"): Remove
'file=?' procedure and use the one from (guix tests).
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Julia's built-in package manager (Pkg) looks for packages in
JULIA_DEPOT_PATH/packages/PACKAGENAME/XXXX, where XXXX is a string
encoding package UUID and SHA1 of files. The link-depot phase creates
a link at the correct location to allow Pkg to find packages that were
already installed by Guix.
* guix/build/julia-build-system.scm (link-depot): New phase.
(%package-path): Modified package path from packages/ to loadpath/.
(project.toml->uuid): New procedure, retrive package uuid from TOML file.
(precompile, check): Adjust to the change in paths.
(%standard-phases): Add link-depot phase.
(julia-build): Add julia-package-uuid keyword.
* guix/build-system/julia.scm (julia-build): Also use the
julia-package-uuid keyword.
* gnu/packages/julia-jll.scm (julia-bzip2-jll, julia-cairo-jll,
julia-compilersupportlibraries-jll, julia-expat-jll, julia-ffmpeg-jll,
julia-fontconfig-jll, julia-freetype2-jll, julia-fribidi-jll,
julia-gettext-jll, julia-glib-jll, julia-gr-jll, julia-gumbo-jll,
julia-imagemagick-jll, julia-jllwrappers-jll, julia-jpegturbo-jll,
julia-lame-jll, julia-libass-jll, julia-libfdk-aac-jll,
julia-libffi-jll, julia-libgcrypt-jll, julia-libglvnd-jll,
julia-libgpg-error-jll, juli-libiconv-jll, julia-libmount-jll,
julia-libpng-jll, julia-libsass-jll, julia-libtiff-jll,
julia-libuuid-jll, julia-libvorbis-jll, julia-lzo-jll,
julia-mbedtls-jll, julia-ogg-jll, julia-openspecfun-jll,
julia-openssl-jll, julia-opus-jll, julia-pcre-jll, julia-pixman-jll,
julia-qt5base-jll, julia-wayland-jll, julia-wayland-protocols-jll,
julia-x264-jll, julia-x265-jll, julia-xkbcommon-jll, julia-xml2-jll,
julia-xorg-libpthread-stubs-jll, julia-xorg-libx11-jll,
julia-xorg-libxau-jll, julia-xorg-libxcb-jll, julia-xorg-libxcursor-jll,
julia-xorg-libxdmcp-jll, julia-xorg-libxext-jll,
julia-xorg-libxfixes-jll, julia-xorg-libxi-jll,
julia-xorg-libxinerama-jll, julia-xorg-libxkbfile-jll,
julia-xorg-libxrandr-jll, julia-xorg-libxrender-jll,
julia-xorg-xcb-util-jll, julia-xorg-xcb-util-keysyms-jll,
julia-xorg-xcb-util-renderutil-jll, julia-xorg-xcb-util-wm-jll,
julia-xorg-xkbcomp-jll, julia-xorg-xkeyboard-config-jll,
julia-xorg-xtrans-jll, julia-xslt-jll, julia-zlib-jll, julia-zstd-jll)
[argument]: Adjust the order of the phases to the change in the
julia-build-system.
* gnu/packages/julia-xyz.scm (julia-bufferedstreams, julia-calculus,
julia-dataframes, julia-datavalues, julia-distances, julia-documenter,
julia-dualnumbers, julia-ellipsisnotation, julia-expronicon,
julia-fileio, julia-fixedpointnumbers, julia-functionwrappers,
julia-fuzzycompletions, julia-genericlinearalgebra, julia-genericschur,
julia-geometrybasics, julia-imagemagick, julia-infinity,
julia-matrixfactorizations, julia-media, julia-missings, julia-nnlib,
julia-optimtestproblems, julia-orderedcollections, julia-prettytables,
julia-pycall, julia-quadmath, julia-safetests, julia-stackviews)
[arguments]: Correct paths to reflect change of %package-path modify
order of phases as link-depot needs to run on an unmodified src
directory add package-name-uuid keyword argument to packages without
Project.toml file.
* gnu/packages/julia.scm (julia)[native-search-paths]: Correct paths to
reflect change of %package-path modify order of phases as link-depot
needs to run on an unmodified src directory.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/build/qt-utils.scm (wrap-qt-program): Fix spelling of "program".
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If your .bashrc (unnecessarily) exports PS1 and you’re in a non-login
shell, Guix crashes:
user@popigai:~$ guix shell --check coreutils
guix shell: checking the environment variables visible from shell '/bin/bash'...
Backtrace:
14 (primitive-load "/home/user/.config/guix/current/bin/g…")
In guix/ui.scm:
2206:7 13 (run-guix . _)
2169:10 12 (run-guix-command _ . _)
In ice-9/boot-9.scm:
1752:10 11 (with-exception-handler _ _ #:unwind? _ # _)
1752:10 10 (with-exception-handler _ _ #:unwind? _ # _)
In guix/store.scm:
658:37 9 (thunk)
1320:8 8 (call-with-build-handler _ _)
1320:8 7 (call-with-build-handler #<procedure 7fe393b7c420 at g…> …)
In guix/status.scm:
800:4 6 (call-with-status-report _ _)
In guix/scripts/environment.scm:
951:12 5 (_)
In guix/store.scm:
2119:24 4 (run-with-store #<store-connection 256.99 7fe39627e500> …)
In guix/scripts/environment.scm:
521:35 3 (_ _)
In unknown file:
2 (string=? ("PS1" . "${debian_chroot:+($debian_chroot)…") …)
In ice-9/boot-9.scm:
1685:16 1 (raise-exception _ #:continuable? _)
1685:16 0 (raise-exception _ #:continuable? _)
ice-9/boot-9.scm:1685:16: In procedure raise-exception:
In procedure string=: Wrong type argument in position 1 (expecting string): ("PS1" . "${debian_chroot:+($debian_chroot)}\\[\\033[01;32m\\]\\u@\\h\\[\\033[00m\\]:\\[\\033[01;34m\\]\\w\\[\\033[00m\\]${EXTRA}\\$ ")
user@popigai:~$
This is because the match pattern doesn’t expect `(vhash-assoc "PS1" actual)`
to return a pair.
* guix/scripts/environment.scm (validate-child-shell-environment): Change
match pattern to expect a pair.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* guix/packages/packages.scm (<package>): Clarify that the license
field takes a list of licenses rather than a generic list.
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
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* guix/import/utils.scm (spdx-string->license): Identify more
licenses (CC-BY-4.0, Freetype, HPND).
* guix/licenses.scm: Add a comment that mentions "MIT" so that people
who grep for MIT end up there.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* guix/import/print.scm (package->code)[variable-reference]
[object->code]: New procedures.
[package-lists->code]: Rewrite in terms of 'object->code'.
Pass the 'arguments' field through 'object->code'.
* tests/print.scm (pkg-with-arguments, pkg-with-arguments-source): New
variables.
("package with arguments"): New test.
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* guix/import/print.scm (package->code)[source->code]: Handle patches
that are origins.
* tests/print.scm (pkg-with-origin-input): Add 'patches' field.
(pkg-with-origin-patch, pkg-with-origin-patch-source): New variables.
("package with origin patch"): New test.
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* guix/import/print.scm (package->code)[factorized-uri-code]: New
procedure.
[source->code]: Use it, and factorize URI when it's a list.
* tests/print.scm (pkg-with-origin-input): Check origin URI to a list.
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* guix/import/print.scm (package->code)[source->code]: Check whether
VERSION is true before calling 'factorize-uri'.
[package-lists->code]: Add clause for inputs that are origins.
* tests/print.scm (pkg-with-origin-input, pkg-with-origin-input-source):
New variables.
("package with origin input"): New test.
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* guix/import/cran.scm (download): Handle the case where URL is a list.
(fetch-description-from-tarball): New procedure.
(fetch-description): Add #:version parameter. Honor it when REPOSITORY
is 'cran. Use 'fetch-description-from-tarball' when REPOSITORY is
'bioconductor.
(description->package): SOURCE-URL may now be a list.
(cran->guix-package): Pass VERSION to 'fetch-description'.
(cran-recursive-import): Add #:version parameter.
* guix/scripts/import/cran.scm (guix-import-cran): Expect a spec rather
than a mere package name.
* doc/guix.texi (Invoking guix import): Document it.
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* guix/import/pypi.scm (latest-version): New procedure.
(latest-source-release): Rename to...
(source-release): ... this. Add 'version' parameter.
(latest-wheel-release): Rename to...
(wheel-release): ... this. Add 'version' parameter.
(pypi->guix-package): Honor 'version' parameter.
(pypi-recursive-import): Add 'version' parameter and honor it.
* guix/scripts/import/pypi.scm (guix-import-pypi): Expect a spec. Pass
it to 'package-name->name+version'. Pass the 'version' parameter.
* tests/pypi.scm ("pypi->guix-package, no wheel"): Exercise
the #:version parameter.
* doc/guix.texi (Invoking guix import): Document it.
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This change is motivated by the need to disable the default 30 seconds timeout
that Meson uses (see: https://gitlab.gnome.org/GNOME/glib/-/issues/2522), and
also by desire to specify extra options to run the check phase without having
to override it.
* guix/build-system/meson.scm (meson-build) <test-target>: Replace argument
with...
<test-options>: ... this one.
* guix/build/meson-build-system.scm (check): Invoke 'meson test' instead of
'ninja test-target', as the former is configurable via options.
* doc/guix.texi (Build Systems) <meson-build-system>: Update doc.
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This paves the way toward properly fixing https://issues.guix.gnu.org/50957.
* guix/profiles.scm (gdk-pixbuf-loaders-cache-file): Add procedure...
(%default-profile-hooks): ... and register it as a profile hook.
* guix/status.scm (hook-message): Register it here too.
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Adding a profile hook to do so covers most use cases, but it is still
necessary to have the gdk-pixbuf loaders cache file computed at build time, as
software may expect to find loaders support at that time.
* guix/build/glib-or-gtk-build-system.scm: Delete trailing #t.
(%gdk-pixbuf-loaders-cache-file-prefix): New variable.
(generate-gdk-pixbuf-loaders-cache): New procedure.
(generate-gdk-pixbuf-loaders-cache-file): Add procedure...
(%standard-phases): ... and register it as a build phase.
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* guix/build/glib-or-gtk-build-system.scm (gtk-module-directories)
(wrap-all-programs): Fix indentation.
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* guix/build/glib-or-gtk-build-system.scm (wrap-all-programs)
<handle-output>: Precisely build the list of variable specifications, rather
than relying on a bunch of conditionals.
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Fixes <https://issues.guix.gnu.org/50066>.
* guix/packages.scm (patch-and-repack): Test for a tarball using tarball? and
move the plain file copy to the else clause.
Reported-by: Mathieu Othacehe <othacehe@gnu.org>
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* guix/build/qt-utils.scm (find-files-to-wrap): Exclude already wrapped
programs. This is forbidden in wrap-program now due to a738a663a99.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
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Fixes <https://issues.guix.gnu.org/51732>.
Regression introduced in 2015d3f042870860efef10e801b93eacc0742d38.
The (eq? store expected-store) comparison doesn't work on this branch
where the functional cache, with 'cache-object-mapping', is used
extensively, thereby changing the store's object identity.
* guix/store.scm (build-accumulator): Compare the socket of STORE and
EXPECTED-STORE rather than the store themselves.
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* guix/build-system/r.scm (bioconductor-uri): Bump Bioconductor version to
3.14.
* guix/import/cran.scm (%bioconductor-version): Same.
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Previously, most actions would leave the cache as-is because
'guix-environment*' would indirectly call 'exit', and thus its
continuation was never reached.
* guix/scripts/shell.scm (guix-shell): Move call to
'maybe-remove-expired-cache-entries' to EXIT-HOOK.
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* guix/import/egg.scm (eggs-repository): Change URL.
(egg-metadata): Accept optional #:version keyword argument.
(egg->guix-package): Accept ‘version’ argument.
(egg-recursive-import): Add ‘version’ argument and honor it.
* guix/scripts/import/egg.scm (guix-import-egg): Parse a specification instead
of just a package name.
* doc/guix.texi (Invoking guix import): Document it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* doc/guix.texi (Shells Home Services): Document it.
* gnu/home/services/shells.scm (bash-serialize-aliases): New procedure.
(home-bash-configuration, home-bash-extension): Add ‘aliases’ field.
(home-bash-extensions): Adjust accordingly.
* guix/scripts/home/import.scm (generate-bash-configuration+modules): Populate
the ‘alias’ field.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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Previously, 'read-error' exceptions other than "missing closing paren"
would not be reported; instead, we'd directly call (exit 1) without
printing anything.
Fixes <https://issues.guix.gnu.org/51463>.
Reported by Alice BRENON <alice.brenon@ens-lyon.fr>.
* guix/ui.scm (report-load-error): Report the error without re-throwing
upon 'read-error'.
* tests/guix-build.sh: Add test.
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* guix/utils.scm (target-x86-32?, target-x86-64?): New predicates.
* tests/utils.scm ("target-x86-32?", "target-x86-64?"): New tests.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
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* guix/scripts/environment.scm (launch-environment): Call
'primitive-_exit' upon 'system-error.
(suggest-command-name, validate-exit-status): New procedures.
(launch-environment/fork): Call 'validate-exit-status'.
(launch-environment/container)[exit/status*]: New procedure.
Use it instead of 'exit/status'.
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This allows us to skip the expensive man-db profile hook in most cases.
Suggested by Liliana Marie Prikler <liliana.prikler@gmail.com>.
* guix/profiles.scm (manual-database/optional): New procedure.
(%default-profile-hooks): Use it instead of 'manual-database'.
* doc/guix.texi (Documentation): Add footnote about 'man -k' database
creation.
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Fixes <https://issues.guix.gnu.org/49006>.
Reported by Xinglu Chen <public@yoctocell.xyz>.
* guix/import/elpa.scm (elpa-package->sexp)[melpa-recipe]: Add call to
'identity'.
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* guix/import/stackage.scm (%default-lts-version): Update to 18.14.
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* guix/ui.scm (show-guix-help): Use DISPLAY where FORMAT isn't needed.
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This also makes automated ‘guix --h<Tab>’ completion possible.
* guix/ui.scm (show-guix-help): Document that an OPTION's an option,
and all valid options.
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* guix/scripts/home/import.scm (manifest->code): Remove.
(manifest+configuration-files->code): New procedure.
(import-manifest): Use 'manifest+configuration-files->code' instead of
'manifest->code'.
* tests/home-import.scm (eval-test-with-home-environment): Likewise.
(match-home-environment-transformations): New procedure.
("manifest->code: No services, package transformations"): New test.
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* guix/scripts/package.scm (manifest-entry-version-prefix): New
procedure, moved from...
(export-manifest)[version-spec]: ... here. Adjust caller.
* tests/home-import.scm (version-spec): Remove.
(eval-test-with-home-environment): Use 'manifest-entry-version-prefix'
instead.
* guix/scripts/home/import.scm (import-manifest): Likewise.
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Suggested by Liliana Marie Prikler <liliana.prikler@gmail.com>.
* guix/scripts/home/import.scm (configurations+modules): Rename
'destination-directory' to 'configuration-directory'. Improve
docstring.
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'procedure-name' is a debugging aid and cannot be reliably used to
check for procedure equality.
* guix/scripts/home/import.scm (configurations+modules): Remove use of
'procedure-name'.
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Set the name of the file to just the basename of the file passed to
‘local-file’.
* guix/scripts/home/import.scm (basename+remove-dots): New procedure.
(generate-bash-configuration+modules): Use it.
* tests/home-import.scm (match-home-environment-bash-service): Adjust
accordingly.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* tests/home-import.scm: New file.
* Makefile.am (SCM_TESTS): Add it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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Two different services might require the same module(s), so delete duplicates
when generating the ‘use-modules’ form.
* import.scm (manifest->code): Delete duplicate modules.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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