| Commit message (Collapse) | Author | Age |
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Fixes <https://issues.guix.gnu.org/63043>.
* guix/profiles.scm (texlive-font-maps): Define 'texlive-inputs'.
[build]: Use it.
Return #f when TEXLIVE-INPUTS is empty.
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Conflicts:
doc/guix.texi
gnu/local.mk
gnu/packages/admin.scm
gnu/packages/base.scm
gnu/packages/chromium.scm
gnu/packages/compression.scm
gnu/packages/databases.scm
gnu/packages/diffoscope.scm
gnu/packages/freedesktop.scm
gnu/packages/gnome.scm
gnu/packages/gnupg.scm
gnu/packages/guile.scm
gnu/packages/inkscape.scm
gnu/packages/llvm.scm
gnu/packages/openldap.scm
gnu/packages/pciutils.scm
gnu/packages/ruby.scm
gnu/packages/samba.scm
gnu/packages/sqlite.scm
gnu/packages/statistics.scm
gnu/packages/syndication.scm
gnu/packages/tex.scm
gnu/packages/tls.scm
gnu/packages/version-control.scm
gnu/packages/xml.scm
guix/build-system/copy.scm
guix/scripts/home.scm
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Relates to <https://issues.guix.gnu.org/58821>.
Revert 4fef1e850e4872f2bc7c1f0a10cbac176b50895f, which silenced useful
information such as the following warning:
install-info: warning: no info dir entry in
`/gnu/store/...-rottlog-0.72.2/share/info/rottlog.info.gz'
Rationale: profile hooks output is now hidden by default, and can be made
visible via the --verbosity option.
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This makes the profile readable by older Guix instances. This is a
followup to c9fbd40785a99e13a59d8e530830ce85220a9871.
Fixes <https://issues.guix.gnu.org/57306>.
Reported by Arun Isaac <arunisaac@systemreboot.net>.
* guix/profiles.scm (%manifest-format-version): Export.
* guix/scripts/package.scm (build-and-use-profile): Add #:format-version
and pass it to 'profile-derivation'.
* guix/scripts/pull.scm (build-and-install): Pass #:format-version 3.
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* guix/profiles.scm (%manifest-format-version): New variable.
(manifest->gexp): Add optional 'format-version' parameter.
[optional, entry->gexp]: Honor it.
(profile-derivation): Add #:format-version parameter and honor it.
(<profile>)[format-version]: New field.
(profile-compiler): Honor it.
* guix/build/profiles.scm (manifest-sexp->inputs+search-paths): Support
both versions 3 and 4. Remove unused 'properties' variable.
* tests/profiles.scm ("profile-derivation format version 3"): New test.
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Version 2 was introduced in commit
dedb17ad010ee9ef67f3f4f3997dd17f226c8090 (May 2015), which made it into
Guix 0.9.0.
* guix/profiles.scm (find-package): Remove.
(sexp->manifest)[infer-search-paths]: Remove.
Remove clauses for versions 0 and 1.
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Fixes <https://issues.guix.gnu.org/55499>.
Reported by Ricardo Wurmus <rekado@elephly.net>.
With this change, the manifest file created for:
guix install r r-seurat r-cistopic r-monocle3 r-cicero-monocle3 r-assertthat
goes from 5.7M to 176K. Likewise, on this profile, wall-clock time of:
GUIX_PROFILING=gc guix package -I
goes from 0.7s to 0.1s, with heap usage going from 55M to 9M.
* guix/profiles.scm (manifest->gexp)[optional]: New procedure.
[entry->gexp]: Turn into a monadic procedure. Return a 'repeated' sexp
if ENTRY was already visited before.
Adjust caller accordingly. Bump manifest version.
(sexp->manifest)[sexp->manifest-entry]: Turn into a monadic procedure.
Add case for 'repeated' nodes. Add each entry to the current state
vhash.
Add clause for version 4 manifests.
[sexp->manifest-entry/v3]: New procedure, with former
'sexp->manifest-entry' code.
* tests/profiles.scm ("deduplication of repeated entries"): New test.
* guix/build/profiles.scm (manifest-sexp->inputs+search-paths)[let-fields]:
New macro.
Use it. Expect version 4. Add clause for 'repeated' nodes.
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* guix/utils.scm (switch-symlinks): Move to ...
* guix/build/utils.scm (switch-symlinks): ... here.
* guix/profiles.scm, guix/scripts/home.scm, guix/scripts/package.scm: Import
switch-symlinks from (guix build utils).
* guix/scripts/system/reconfigure.scm (switch-system-program): Import (guix
build utils) in G-expression.
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Partly fixes <https://issues.guix.gnu.org/55499>.
Reported by Ricardo Wurmus <rekado@elephly.net>.
For a profile built with:
guix install r-seurat r-cistopic r-monocle3 r-cicero-monocle3
this reduces the size of the 'manifest' file from 6.4M to 5.6M (12%).
* guix/profiles.scm (manifest->gexp)[entry->gexp]: When PROPERTIES is
empty, do not emit a 'properties' field.
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* guix/profiles.scm (manual-database): No longer set the MALLOC_PERTURB_
environment variable.
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Previously user-facing commands would happily start building packages
even if they do not support that system. With this change, all the
user-facing commands reject unsupported packages without going further.
* guix/profiles.scm (profile-derivation): Add #:allow-unsupported-packages?.
Define 'check-supported-packages' and honor #:allow-unsupported-packages?.
* tests/guix-pack.sh, tests/guix-package.sh, tests/guix-shell.sh: Ensure
that unsupported packages are rejected.
* tests/guix-system.sh: Pass "--system=armhf-linux" when attempting to
build gnu/system/examples/asus-c201.tmpl.
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* guix/profiles.scm (texlive-font-maps): Run mktexlsr on resulting tree to
provide ls-R file.
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Long ago we had a profile hook, called “texlive-configuration”, which would
operate on the texlive-* packages that have actually been installed in the
profile, build a union directory, and then install a texmf.cnf file that
declared the prefix of the TeX Live tree to be the union directory. It then
generated font maps based on the fonts that had actually been installed.
This approach had multiple disadvantages, the worst of which was that you
could only really have one TeX Live tree. Commit
04a0b1e09abce99857e7930336421ca6d15ae630 addressed this, where texmf.cnf was
modified *once* and for all in texlive-bin to reference the GUIX_TEXMF
variable to determine the root of the tree. This made much of
“texlive-configuration” obsolete, because we didn’t need to have any union
directories at all, because we had no need for a customized per-profile
variant of texmf.cnf.
Unfortunately, with the loss of the profile hook we would no longer build font
maps. This patch resurrects the profile hook: we’re again generating font
maps (such as pdftex.map) based on the contents of the profile.
* gnu/packages/tex.scm (texlive-default-updmap.cfg): New variable.
* guix/profiles.scm (texlive-configuration): Rename this...
(texlive-font-maps): ...to this; update to run updmap-sys on the contents of
the profile to generate only font maps.
(%default-profile-hooks): Add texlive-font-maps.
* guix/status.scm (hook-message): Rename unused texlive-configuration to
texlive-font-maps.
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* guix/profiles.scm (generation-number): Add optional 'base-profile'
parameter and use it.
* guix/scripts/system.scm (process-command): Add "/run/current-system"
as first argument to 'generation-number'.
* doc/guix.texi (Invoking guix system): Clarify that 'guix system
describe' shows the running system.
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* guix/profiles.scm (gdk-pixbuf-loaders-cache-file): Handle both a string or a
package object for GDK-PIXBUF, as these are the two types that can be returned
by MANIFEST-LOOKUP-PACKAGE.
Suggested-by: Ludovic Courtès <ludo@gnu.org>
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'guix install' would otherwise fail with a wrong type argument whet attempting
to call the hook.
* guix/profiles.scm (gdk-pixbuf-loaders-cache-file) <file-append>: Replace
with...
<string-append>: ... this, as gdk-pixbuf has already been expanded to a string
at this point.
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This paves the way toward properly fixing https://issues.guix.gnu.org/50957.
* guix/profiles.scm (gdk-pixbuf-loaders-cache-file): Add procedure...
(%default-profile-hooks): ... and register it as a profile hook.
* guix/status.scm (hook-message): Register it here too.
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This allows us to skip the expensive man-db profile hook in most cases.
Suggested by Liliana Marie Prikler <liliana.prikler@gmail.com>.
* guix/profiles.scm (manual-database/optional): New procedure.
(%default-profile-hooks): Use it instead of 'manual-database'.
* doc/guix.texi (Documentation): Add footnote about 'man -k' database
creation.
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* guix/profiles.scm (package->development-manifest): New procedure.
* guix/scripts/environment.scm (input->manifest-entry)
(package-environment-inputs): Remove.
* guix/scripts/environment.scm (options/resolve-packages): Use
'package->development-manifest' instead of 'package-environment-inputs'.
* tests/profiles.scm ("package->development-manifest"): New test.
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It has been reported in IRC, that directories may show up multiple times in
subdirs.el, probably a result of propagation. This can for instance be seen
by ‘guix environment --ad-hoc emacs emacs-guix’, which will generate multiple
references to dash. With this patch only one reference per package is
generated.
* guix/profiles.scm (emacs-subdirs): wrap subdirs added to
‘normal-top-level-add-to-load-path’ in ‘delete-duplictes’.
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Note: this merge actually changes the 'curl' and 'python-attrs' derivations,
as part of solving caf4a7a2770ef4d05a6e18f40d602e51da749ddc and
12964df69a99de6190422c752fef65ef813f3b6b respectively.
4604d43c0e (gnu: gnutls@3.6.16: Fix cross-compilation.) was ignored because it
cannot currently be tested.
Conflicts:
gnu/local.mk
gnu/packages/aidc.scm
gnu/packages/boost.scm
gnu/packages/curl.scm
gnu/packages/nettle.scm
gnu/packages/networking.scm
gnu/packages/python-xyz.scm
gnu/packages/tls.scm
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Suggested by Maxime Devos <maximedevos@telenet.be>.
* guix/profiles.scm (%precious-variables): Add "XAUTHORITY".
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* guix/profiles.scm (%precious-variables): New variable.
(purify-environment, load-profile): New procedures.
* guix/scripts/environment.scm (%precious-variables)
(purify-environment, create-environment): Remove.
(launch-environment): Call 'load-profile' instead of 'create-environment'.
* tests/profiles.scm ("load-profile"): New test.
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When running:
guix environment --ad-hoc gnome --no-grafts --search-paths
this reduces wall-clock time by ~5%. The number of object cache lookups
goes down from 96K to 89K. (Note that 'gnome' is an interesting example
because it has many propagated inputs, which themselves have propagated
inputs too, which would lead to a long input list and a long manifest in
the 'profile-derivation' gexp.)
* guix/profiles.scm (profile-derivation)[inputs, search-paths]: Remove.
[extra-inputs]: New variable.
[builder]: Adjust call to 'build-profile'.
* guix/build/profiles.scm (manifest-sexp->inputs+search-paths): New
procedure.
(build-profile): Remove 'inputs' parameter; make 'manifest' the 2nd
positional parameter and add #:extra-inputs. Call
'manifest-sexp->inputs+search-paths' to obtain 'inputs' and
'search-paths'.
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Conflicts:
gnu/local.mk
gnu/packages/algebra.scm
gnu/packages/bioinformatics.scm
gnu/packages/curl.scm
gnu/packages/docbook.scm
gnu/packages/emacs-xyz.scm
gnu/packages/maths.scm
gnu/packages/plotutils.scm
gnu/packages/python-web.scm
gnu/packages/python-xyz.scm
gnu/packages/radio.scm
gnu/packages/readline.scm
gnu/packages/tls.scm
gnu/packages/xml.scm
gnu/packages/xorg.scm
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When running:
GUIX_PROFILING="gc object-cache" ./pre-inst-env \
guix install gnome -p /tmp/sdsdfsd --no-grafts -n
this reduces the number of object cache lookup from 115K to 96K, with a
slight CPU and memory usage reduction as well.
* guix/profiles.scm (check-for-collisions)[candidates]: Exclude entries
if their 'item' fields are eq?.
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Fixes <https://bugs.gnu.org/48519>.
* guix/profiles.scm (texlive-configuration): Build only if texlive-base is
present in the profile's manifest.
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Conflicts:
gnu/local.mk
gnu/packages/bioinformatics.scm
gnu/packages/django.scm
gnu/packages/gtk.scm
gnu/packages/llvm.scm
gnu/packages/python-web.scm
gnu/packages/python.scm
gnu/packages/tex.scm
guix/build-system/asdf.scm
guix/build/emacs-build-system.scm
guix/profiles.scm
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The profile hook would fail when preparing an environment for a package using
texlive-union, because the union already had a updmap.cfg file.
Reported-by: Lars-Dominik Braun <ldb@leibniz-psychology.org>.
* guix/profiles.scm (texlive-configuration): Delete updmap.cfg if it exists.
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* guix/profiles.scm (texlive-configuration): Run updmap to generate font maps
necessary for pdflatex and other tools.
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* guix/profiles.scm (emacs-subdirs): New variable.
(%default-profile-hooks): Add it here.
* guix/status.scm (hook-message): Add a message for emacs-subdirs.
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Previously, transformations applied from a manifest (rather than via
"guix install") would be lost. This change fixes that and simplifies
things.
Reported by zimoun at
<https://lists.gnu.org/archive/html/guix-devel/2021-02/msg00153.html>.
* guix/profiles.scm (default-properties): New procedure.
(package->manifest-entry): Use it for #:properties.
* guix/scripts/pack.scm (guix-pack)[with-transformations]: Remove.
Remove caller.
* guix/scripts/package.scm (transaction-upgrade-entry): Remove calls to
'manifest-entry-with-transformations'.
* tests/guix-package.sh: Add test.
* tests/transformations.scm ("options->transformation + package->manifest-entry"):
New test.
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* guix/profiles.scm (manifest->code): New procedure.
* tests/profiles.scm ("manifest->code, simple")
("manifest->code, simple, versions")
("manifest->code, transformations"): New tests.
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Attempting to compose multiple TeX Live trees (such as can happen when using a
texlive-union generated package) proved problematic; only the texmf.cnf
configuration file from the union would be honored, causing other TeX Live
components to be ignored.
This change does away with TeX Live unions, instead relying on the default
texmf.cnf configuration file provided by the texlive-bin package to honor
individual TeX Live trees referred to via the newly introduced GUIX_TEXMF
variable, and replacing the texlive-union procedure by texlive-updmap.cfg, to
explicit that generating the fonts map configuration is now its sole purpose.
* gnu/packages/tex.scm (texlive-bin)[phases]{customize-texmf}: New phase.
{postint}: Move the patching of the texmf.cnf file to the new above phase.
Patch the updmap.pl script to find its Perl modules.
[native-search-paths]: Rename the TEXMF variable to GUIX_TEXMF. Remove the
TEXMFCNF variable.
* guix/profiles.scm (texlive-configuration): Remove procedure.
(%default-profile-hooks)[texlive-configuration]: Unregister hook.
(texlive-union): Alias to what has moved to...
(texlivke-updmap.cfg): ... here. Update doc. Do not provide a different
texmf.cnf configuration.
[inherit]: Do not inherit from texlive-base.
[build-system]: Switch to the copy-build-system.
[arguments]{install-plan}: New argument.
[phases]{regenerate-updmap.cfg}: New phase, which keeps only the fonts map
generating code from the previous builder code.
[inputs]: Remove bash, and move to ...
[propagated-inputs]: ... here.
[native-inputs]: Remove field, and move the source of the base updmap.cfg file
to...
[source]: ... here.
[synopsis]: Update.
[description]: Likewise.
[license]: Delete duplicates.
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* gnu/profiles.scm (packages->manifest): Delete duplicate entries.
* tests/profiles.scm ("packages->manifest, no duplicates"): New test.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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Fixes <https://bugs.gnu.org/23874>.
Reported by Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>.
* guix/profiles.scm (manifest-transaction-effects): Delete duplicates in
install and remove. Let multiple upgrades and downgrades shadow previous
transactions of the same kind.
* tests/profiles.scm
("manifest-transaction-effects no double install or upgrades")
("manifest-transaction-effects no double downgrade")
("manifest-transaction-effects no double removal"): New tests.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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Partly fixes <https://bugs.gnu.org/44053>.
Reported by Joshua Branson <jbranso@dismail.de>
and Maxim Cournoyer <maxim.cournoyer@gmail.com>.
* guix/profiles.scm (xdg-mime-database): When PKGDIRS contains only one
element, symlink directly to it. Invoke 'update-mime-database' only
when PKGDIRS contains two or more elements, which is less frequent.
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This commit adds support for GZIP compression for linux-libre kernel
modules. The initrd modules are kept uncompressed as the initrd is already
compressed as a whole.
The linux-libre kernel also supports XZ compression, but as Guix does not have
any available bindings for now, and the compression time is far more
significant, GZIP seems to be a better option.
* gnu/build/linux-modules.scm (modinfo-section-contents): Use
'call-with-gzip-input-port' to read from a module file using '.gz' extension,
(strip-extension): new procedure,
(dot-ko): adapt to support compression,
(ensure-dot-ko): ditto,
(file-name->module-name): ditto,
(find-module-file): ditto,
(load-linux-module*): ditto,
(module-name->file-name/guess): ditto,
(module-name-lookup): ditto,
(write-module-name-database): ditto,
(write-module-alias-database): ditto,
(write-module-device-database): ditto.
* gnu/installer.scm (installer-program): Add "guile-zlib" to the extensions.
* gnu/machine/ssh.scm (machine-check-initrd-modules): Ditto.
* gnu/services.scm (activation-script): Ditto.
* gnu/services/base.scm (default-serial-port): Ditto,
(agetty-shepherd-service): ditto,
(udev-service-type): ditto.
* gnu/system/image.scm (gcrypt-sqlite3&co): Ditto.
* gnu/system/linux-initrd.scm (flat-linux-module-directory): Add "guile-zlib"
to the extensions and make sure that the initrd only contains
uncompressed module files.
* gnu/system/shadow.scm (account-shepherd-service): Add "guile-zlib" to the
extensions.
* guix/profiles.scm (linux-module-database): Ditto.
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* Makefile.am (MODULES): Remove guix/zlib.scm and guix/lzlib.scm,
(SCM_TESTS): remove tests/zlib.scm, tests/lzlib.scm.
* build-aux/build-self.scm (make-config.scm): Remove unused %libz variable.
* configure.ac: Remove LIBZ and LIBLZ variables and check instead for
Guile-zlib and Guile-lzlib.
* doc/guix.texi ("Requirements"): Remove zlib requirement and add Guile-zlib
and Guile-lzlib instead.
* gnu/packages/package-management.scm (guix)[native-inputs]: Add "guile-zlib"
and "guile-lzlib",
[inputs]: remove "zlib" and "lzlib",
[propagated-inputs]: ditto,
[arguments]: add "guile-zlib" and "guile-lzlib" to Guile load path.
* guix/config.scm.in (%libz, %liblz): Remove them.
* guix/lzlib.scm: Remove it.
* guix/man-db.scm: Use (zlib) instead of (guix zlib).
* guix/profiles.scm (manual-database): Do not stub (guix config) in imported
modules list, instead add "guile-zlib" to the extension list.
* guix/scripts/publish.scm: Use (zlib) instead of (guix zlib) and (lzlib)
instead of (guix lzlib),
(string->compression-type, effective-compression): do not check for zlib and
lzlib availability.
* guix/scripts/substitute.scm (%compression-methods): Do not check for lzlib
availability.
* guix/self.scm (specification->package): Add "guile-zlib" and "guile-lzlib"
and remove "zlib" and "lzlib",
(compiled-guix): remove "zlib" and "lzlib" arguments and add guile-zlib and
guile-lzlib to the dependencies, also do not pass "zlib" and "lzlib" to
"make-config.scm" procedure,
(make-config.scm): remove "zlib" and "lzlib" arguments as well as %libz and
%liblz variables.
* guix/utils.scm (lzip-port): Use (lzlib) instead of (guix lzlib) and do not
check for lzlib availability.
* guix/zlib.scm: Remove it.
* m4/guix.m4 (GUIX_LIBZ_LIBDIR, GUIX_LIBLZ_FILE_NAME): Remove them.
* tests/lzlib.scm: Use (zlib) instead of (guix zlib) and (lzlib)
instead of (guix lzlib), and do not check for zlib and lzlib availability.
* tests/publish.scm: Ditto.
* tests/substitute.scm: Do not check for lzlib availability.
* tests/utils.scm: Ditto.
* tests/zlib.scm: Remove it.
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* guix/utils.scm (&fix-hint): Move to...
* guix/diagnostics.scm (&fix-hint): ... here.
* gnu.scm: Adjust imports accordingly.
* gnu/system/mapped-devices.scm: Likewise.
* guix/channels.scm: Likewise.
* guix/profiles.scm: Likewise.
* guix/scripts/system/reconfigure.scm: Likewise.
* guix/ssh.scm: Likewise.
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Fixes <https://bugs.gnu.org/41924>.
* guix/profiles.scm (linux-module-database)[build]: Arrange so
'directory-entries' always returns a list. Add 'match' clause for the
empty list.
Co-authored-by: Ivan Kozlov <kanichos@yandex.ru>
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* guix/profiles.scm (linux-module-database): Reindent.
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Suggested by Edouard Klein <edk@beaver-labs.com>.
* guix/profiles.scm (check-for-collisions): Export.
* guix/lint.scm (check-profile-collisions): New procedure.
(%local-checkers): Add 'profile-collisions' checker.
* tests/lint.scm ("profile-collisions: no warnings")
("profile-collisions: propagated inputs collide")
("profile-collisions: propagated inputs collide, store items"): New tests.
* doc/guix.texi (Invoking guix lint): Document it.
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