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* gnu: emacs-epkg: Update to 3.3.0.Nicolas Goaziou2021-06-03
| | | | * gnu/packages/emacs-xyz.scm (emacs-epkg): Update to 3.3.0.
* gnu: emacs-closql: Update to 1.0.5.Nicolas Goaziou2021-06-03
| | | | * gnu/packages/emacs-xyz.scm (emacs-closql): Update to 1.0.5.
* gnu: emacs-ebdb: Update to 0.6.23.Nicolas Goaziou2021-06-03
| | | | * gnu/packages/emacs-xyz.scm (emacs-ebdb): Update to 0.6.23.
* gnu: monolith: Update to 2.5.0.Nicolas Goaziou2021-06-03
| | | | * gnu/packages/web.scm (monolith): Update to 2.5.0.
* gnu: rust-regex-1: Update to 1.5.4.Nicolas Goaziou2021-06-03
| | | | * gnu/packages/crates-io.scm (rust-regex-1): Update to 1.5.4.
* gnu: rust-aho-corasick-0.7: Update to 0.7.18.Nicolas Goaziou2021-06-03
| | | | * gnu/packages/crates-io.scm (rust-aho-corasick-0.7): Update to 0.7.18.
* gnu: rust-memchr-2: Update to 2.4.0.Nicolas Goaziou2021-06-03
| | | | * gnu/packages/crates-io.scm (rust-memchr-2): Update to 2.4.0.
* gnu: rust-regex-syntax-0.6: Update to 0.6.25.Nicolas Goaziou2021-06-03
| | | | * gnu/packages/crates-io.scm (rust-regex-syntax-0.6): Update to 0.6.25.
* gnu: rust-reqwest-0.11: Fix build.Nicolas Goaziou2021-06-03
| | | | | * gnu/packages/crates-io.scm (rust-reqwest-0.11)[arguments]: Add missing Cargo development inputs.
* gnu: rust-reqwest-0.11: Update to 0.11.3.Nicolas Goaziou2021-06-03
| | | | * gnu/packages/crates-io.scm (rust-reqwest-0.11): Update to 0.11.3.
* gnu: rust-sha2-0.9: Update to 0.9.5.Nicolas Goaziou2021-06-03
| | | | * gnu/packages/crates-io.scm (rust-sha2-0.9): Update to 0.9.5.
* gnu: Add rust-cpufeatures-0.1.Nicolas Goaziou2021-06-03
| | | | * gnu/packages/crates-io.scm (rust-cpufeatures-0.1): New variable.
* gnu: Add rust-sha2-asm-0.6.Nicolas Goaziou2021-06-03
| | | | | * gnu/packages/crates-io.scm (rust-sha2-asm-0.6): New variable. (rust-sha2-asm-0.5): Inherit from above.
* gnu: rust-url-2: Update to 2.2.2.Nicolas Goaziou2021-06-03
| | | | * gnu/packages/crates-io.scm (rust-url-2): Update to 2.2.2.
* gnu: rust-assert-cmd-1: Update to 1.0.4.Nicolas Goaziou2021-06-03
| | | | * gnu/packages/crates-io.scm (rust-assert-cmd-1): Update to 1.0.4.
* machine: ssh: Respect calling convention for monadic procedures.Ludovic Courtès2021-06-03
| | | | | | | | | | Fixes a regression introduced in 2885c3568edec35086f8feeae5b60259cbea407c. Reported by Mathieu Othacehe. * gnu/machine/ssh.scm (deploy-managed-host)[eval/error-handling]: Return two values in the standard case.
* gnu: Add fit-sne.Ricardo Wurmus2021-06-03
| | | | * gnu/packages/bioinformatics.scm (fit-sne): New variable.
* gnu: r-with-tests: Use patched texlive-amsfonts.Lars-Dominik Braun2021-06-03
| | | | | | | See commit 75af43162e58a0b3fdc804963809ecb801fb81b7. * gnu/packages/statistics.scm (r-with-tests)[native-inputs]: Replace texlive-amsfonts with texlive-amsfonts/patched.
* gnu: openshot: Use free font.Leo Prikler2021-06-03
| | | | | * gnu/packages/video.scm (openshot)[inputs]: Use font-dejavu. [patch-font-location]: Adjust accordingly.
* gnu: Remove font-ubuntu.Leo Prikler2021-06-03
| | | | | | | The Ubuntu Font License has not been approved by the FSF and is considered non-free by Debian and Fedora, see <https://bugs.gnu.org/48802>. * gnu/packages/fonts.scm (font-ubuntu): Removed variable.
* gnu: Add legit.Pierre Neidhardt2021-06-03
| | | | * gnu/packages/lisp-xyz.scm (cl-legit, ecl-legit, sbcl-legit): New variables.
* gnu: Add simple-inferiors.Pierre Neidhardt2021-06-03
| | | | | * gnu/packages/lisp-xyz.scm (cl-simple-inferiors, ecl-simple-inferiors, sbcl-simple-inferiors): New variables.
* gnu: curl: Update to 7.77.0 [fixes CVE-2021-{22897,22898,22901}].Leo Famulari2021-06-02
| | | | | | * gnu/packages/curl.scm (curl/fixed): Replace with ... (curl-7.77.0): ... new variable. (curl)[replacement]: Use curl-7.77.0.
* gnu: expat: Replace with 2.4.1 [fixes CVE-2013-0340].Marius Bakke2021-06-02
| | | | | | | * gnu/packages/xml.scm (expat-2.4.1): New variable. (expat)[replacement]: New field. Co-authored-by: Leo Famulari <leo@famulari.name>
* gnu: Add emacs-org-pandoc-import.Xinglu Chen2021-06-02
| | | | | | * gnu/packages/emacs-xyz.scm (emacs-org-pandoc-import): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
* gnu: pioneer: Build with model files.Diego Nicola Barbato2021-06-02
| | | | | | | | | Fixes <https://bugs.gnu.org/48686>. * gnu/packages/games.scm (pioneer)[arguments]: Add make-flags for building with model files. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
* gnu: r-robustbase: Update to 0.93-8.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/statistics.scm (r-robustbase): Update to 0.93-8.
* gnu: r-deoptimr: Update to 1.0-9.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/statistics.scm (r-deoptimr): Update to 1.0-9.
* gnu: r-beeswarm: Update to 0.4.0.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/statistics.scm (r-beeswarm): Update to 0.4.0.
* gnu: r-fastcluster: Update to 1.2.3.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/statistics.scm (r-fastcluster): Update to 1.2.3.
* gnu: r-matrixstats: Update to 0.59.0.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/statistics.scm (r-matrixstats): Update to 0.59.0.
* gnu: r-e1071: Update to 1.7-7.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/statistics.scm (r-e1071): Update to 1.7-7.
* gnu: r-rcpparmadillo: Update to 0.10.5.0.0.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.10.5.0.0.
* gnu: r-rversions: Update to 2.1.1.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/statistics.scm (r-rversions): Update to 2.1.1.
* gnu: r-formatr: Update to 1.11.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/statistics.scm (r-formatr): Update to 1.11.
* gnu: r-mgcv: Update to 1.8-36.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/statistics.scm (r-mgcv): Update to 1.8-36.
* gnu: r-matrix: Update to 1.3-4.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/statistics.scm (r-matrix): Update to 1.3-4.
* gnu: r-textshape: Update to 1.7.3.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/cran.scm (r-textshape): Update to 1.7.3.
* gnu: r-calculus: Update to 0.3.1.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/cran.scm (r-calculus): Update to 0.3.1.
* gnu: r-seurat: Update to 4.0.2.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/cran.scm (r-seurat): Update to 4.0.2.
* gnu: r-parsnip: Update to 0.1.6.Ricardo Wurmus2021-06-02
| | | | | * gnu/packages/cran.scm (r-parsnip): Update to 0.1.6. [propagated-inputs]: Add r-lifecycle.
* gnu: r-clusterr: Update to 1.2.5.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/cran.scm (r-clusterr): Update to 1.2.5.
* gnu: r-rsconnect: Update to 0.8.18.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/cran.scm (r-rsconnect): Update to 0.8.18.
* gnu: r-forecast: Update to 8.15.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/cran.scm (r-forecast): Update to 8.15.
* gnu: r-archivist: Update to 2.3.6.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/cran.scm (r-archivist): Update to 2.3.6.
* gnu: r-biclust: Update to 2.0.3.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/cran.scm (r-biclust): Update to 2.0.3.
* gnu: r-actuar: Update to 3.1-4.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/cran.scm (r-actuar): Update to 3.1-4.
* gnu: r-gdina: Update to 2.8.7.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/cran.scm (r-gdina): Update to 2.8.7.
* gnu: r-parameters: Update to 0.14.0.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/cran.scm (r-parameters): Update to 0.14.0.
* gnu: r-leiden: Update to 0.3.8.Ricardo Wurmus2021-06-02
| | | | * gnu/packages/cran.scm (r-leiden): Update to 0.3.8.
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