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* gnu: Use make-linux-libre-headers.Carl Dong2019-05-29
| | | | | | | | | | | | | | * gnu/packages/linux.scm (make-linux-libre-headers): New variable. (linux-libre): Rename to... (linux-libre-5.1): ...this. (linux-libre-headers): Rename to... (linux-libre-headers-4.14.67): ...this. (linux-libre-5.1, linux-libre-headers-4.14.67): Use make-linux-libre-headers. (linux-libre-5.1, linux-libre-headers-5.1, linux-libre-headers-4.19, %linux-libre-4.15-version, %linux-libre-4.15-hash, linux-libre-4.15, linux-libre-headers-4.15, linux-libre-headers-4.14): New variables. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* gnu: cross-base: Allow non-default linux-headers.Carl Dong2019-05-29
| | | | | | | * gnu/packages/cross-base.scm (cross-kernel-headers): Add LINUX-HEADERS optional argument. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* gnu: Add basic support for riscv64-linux-gnu targets.Carl Dong2019-05-29
| | | | | | | | | * gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add "riscv64-linux". * gnu/packages/linux.scm (system->linux-architecture): Add "riscv" prefix. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* gnu: Add childsplay.Nicolas Goaziou2019-05-29
| | | | * gnu/packages/education.scm (childsplay): New variable.
* installer: Fix wifi menu crash with hidden SSIDs.Mathieu Othacehe2019-05-29
| | | | | | | | | | This fixes https://issues.guix.gnu.org/issue/35622. * gnu/installer/connman.scm (<service>): Mention that name may be false. * gnu/installer/newt/wifi.scm (wifi-services): Filter out wifi services without name. Co-authored by: Pierre Neidhardt <mail@ambrevar.xyz>
* gnu: awscli: Add missing input.Ricardo Wurmus2019-05-29
| | | | | | | | Fixes <https://bugs.gnu.org/35980>. * gnu/packages/python-web.scm (awscli)[arguments]: Add build phase "fix-reference-to-groff". [inputs]: Add groff.
* gnu: r-scran: Update to 1.12.1.Ricardo Wurmus2019-05-29
| | | | * gnu/packages/bioinformatics.scm (r-scran): Update to 1.12.1.
* gnu: r-scater: Update to 1.12.2.Ricardo Wurmus2019-05-29
| | | | * gnu/packages/bioinformatics.scm (r-scater): Update to 1.12.2.
* gnu: r-sva: Update to 3.32.1.Ricardo Wurmus2019-05-29
| | | | * gnu/packages/bioinformatics.scm (r-sva): Update to 3.32.1.
* gnu: r-genomicfeatures: Update to 1.36.1.Ricardo Wurmus2019-05-29
| | | | * gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.36.1.
* gnu: r-edger: Update to 3.26.4.Ricardo Wurmus2019-05-29
| | | | * gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.4.
* gnu: r-variantannotation: Update to 1.30.1.Ricardo Wurmus2019-05-29
| | | | * gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.30.1.
* gnu: r-atacseqqc: Update to 1.8.1.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.8.1.
* gnu: r-icobra: Update to 1.12.1.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/bioconductor.scm (r-icobra): Update to 1.12.1.
* gnu: r-chippeakanno: Update to 3.18.1.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.18.1.
* gnu: r-geosphere: Update to 1.5-10.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/cran.scm (r-geosphere): Update to 1.5-10.
* gnu: r-ggfortify: Update to 0.4.7.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/cran.scm (r-ggfortify): Update to 0.4.7.
* gnu: r-wgcna: Update to 1.68.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/cran.scm (r-wgcna): Update to 1.68.
* gnu: r-bookdown: Update to 0.11.Ricardo Wurmus2019-05-28
| | | | | * gnu/packages/cran.scm (r-bookdown): Update to 0.11. [propagated-inputs]: Add ghc-pandoc; remove r-yaml.
* gnu: r-upsetr: Update to 1.4.0.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/cran.scm (r-upsetr): Update to 1.4.0.
* gnu: r-epi: Update to 2.37.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/cran.scm (r-epi): Update to 2.37.
* gnu: r-etm: Update to 1.0.5.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/cran.scm (r-etm): Update to 1.0.5.
* gnu: r-cmprsk: Update to 2.2-8.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/cran.scm (r-cmprsk): Update to 2.2-8.
* gnu: r-ks: Update to 1.11.5.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/cran.scm (r-ks): Update to 1.11.5.
* gnu: r-bayesplot: Update to 1.7.0.Ricardo Wurmus2019-05-28
| | | | | * gnu/packages/cran.scm (r-bayesplot): Update to 1.7.0. [propagated-inputs]: Add r-glue, r-tibble, and r-tidyselect.
* gnu: r-refgenome: Update to 1.7.7.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/cran.scm (r-refgenome): Update to 1.7.7.
* gnu: r-snakecase: Update to 0.11.0.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/cran.scm (r-snakecase): Update to 0.11.0.
* gnu: r-openxlsx: Update to 4.1.0.1.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/cran.scm (r-openxlsx): Update to 4.1.0.1.
* gnu: r-pillar: Update to 1.4.1.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/cran.scm (r-pillar): Update to 1.4.1.
* gnu: r-tsp: Update to 1.1-7.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/cran.scm (r-tsp): Update to 1.1-7.
* gnu: r-jomo: Update to 2.6-8.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/cran.scm (r-jomo): Update to 2.6-8.
* gnu: r-ksamples: Update to 1.2-9.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/cran.scm (r-ksamples): Update to 1.2-9.
* gnu: r-lpsolve: Update to 5.6.13.1.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/cran.scm (r-lpsolve): Update to 5.6.13.1.
* gnu: r-car: Update to 3.0-3.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/statistics.scm (r-car): Update to 3.0-3.
* gnu: r-fpc: Update to 2.2-1.Ricardo Wurmus2019-05-28
| | | | | * gnu/packages/statistics.scm (r-fpc): Update to 2.2-1. [propagated-inputs]: Remove r-trimcluster.
* gnu: r-prabclus: Update to 2.2-7.1.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/statistics.scm (r-prabclus): Update to 2.2-7.1.
* gnu: r-zoo: Update to 1.8-6.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/statistics.scm (r-zoo): Update to 1.8-6.
* gnu: r-rmarkdown: Update to 1.13.Ricardo Wurmus2019-05-28
| | | | | * gnu/packages/statistics.scm (r-rmarkdown): Update to 1.13. [propagated-inputs]: Add r-xfun.
* gnu: r-evaluate: Update to 0.14.Ricardo Wurmus2019-05-28
| | | | * gnu/packages/statistics.scm (r-evaluate): Update to 0.14.
* gnu: python-attrs: Update to 19.1.0.h.nasajpour2019-05-28
| | | | | | * gnu/packages/python-xyz.scm (python-attrs): Update to 19.1.0. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* gnu: python-flask: Update to 1.0.3.h.nasajpour2019-05-28
| | | | | | * gnu/packages/python-web.scm (python-flask): Update to 1.0.3. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* gnu: d-feet: Fix missing input and update to 0.3.14.Pierre Neidhardt2019-05-28
| | | | | * gnu/packages/gnome.scm (d-feet): Update to 0.3.14. [inputs]: Add hicolor-icon-theme since d-feet won't list anything without it.
* gnu: guix: Update to 35d1354.Ludovic Courtès2019-05-28
| | | | * gnu/packages/package-management.scm (guix): Update to 35d1354.
* gnu: emacs-relint: Update to 1.8.Nicolas Goaziou2019-05-27
| | | | * gnu/packages/emacs-xyz.scm (emacs-relint): Update to 1.8.
* gnu: emacs-xr: Update to 1.12.Nicolas Goaziou2019-05-27
| | | | * gnu/packages/emacs-xyz.scm (emacs-xr): Update to 1.12.
* gnu: guix: Add dependency on lzlib.Ludovic Courtès2019-05-27
| | | | * gnu/packages/package-management.scm (guix)[inputs]: Add LZLIB.
* gnu: r-shiny: Fix JavaScript minification.Ricardo Wurmus2019-05-27
| | | | | | Fixes <https://bugs.gnu.org/35923>. * gnu/packages/cran.scm (r-shiny)[native-inputs]: Add uglify-js.
* gnu: Add osmctoolsGuillaume LE VAILLANT2019-05-27
| | | | | | * gnu/packages/geo.scm (osmctools): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: go@1.4: Update to 1.4-bootstrap-20171003.Alex Griffin2019-05-27
| | | | | | | | | | | | * gnu/packages/golang.scm (go-1.4): Use the bootstrap branch that is still supported upstream. [version]: Update to 1.4-bootstrap-20171003. [arguments]: Remove obsolete fix for timezone test which is now included upstream. Don't manually disable cgo because it is disabled by default. Manually enable test suite because future releases will disable tests by default. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: python-alembic: Update to 1.0.10.Danny Milosavljevic2019-05-27
| | | | * gnu/packages/databases.scm (python-alembic): Update to 1.0.10.
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