summaryrefslogtreecommitdiff
path: root/gnu
Commit message (Collapse)AuthorAge
* Merge remote-tracking branch 'origin/version-1.2.0' into masterMaxim Cournoyer2020-11-17
|\ | | | | | | | | | | | | | | Conflicts: gnu/packages/bioinformatics.scm The python-pysam package fixed in master was kept instead of the update done in the version-1.2.0 branch.
| * installer: Fix device synchronization.Mathieu Othacehe2020-11-17
| | | | | | | | | | | | | | | | | | | | | | | | | | Reported by Florian Pelz: https://lists.gnu.org/archive/html/guix-devel/2020-11/msg00326.html. * gnu/installer/utils.scm (call-with-time): New procedure, (let/time): new macro. * gnu/installer/parted.scm (with-delay-device-in-use?): Increase the retry count to 16. (non-install-devices): Remove the call to with-delay-device-in-use? as it doesn't return the expected result, and would block much longer now. (free-parted): Log the time required to sync each device.
| * gnu: guix: Use libexec/guix/guile in the 'guix' shebang.Ludovic Courtès2020-11-16
| | | | | | | | | | | | | | This is a followup to 880fe019ae64df37815bbdb1a22305f99dae759d. * gnu/packages/package-management.scm (guix)[arguments]: Delete 'patch-shebangs' phase.
| * services: mingetty: Export configuration accessors.Marius Bakke2020-11-16
| | | | | | | | * gnu/services/base: Export configuration accessors for mingetty.
| * Properly deal with build directories containing '~'.Ludovic Courtès2020-11-16
| | | | | | | | | | | | | | | | | | | | | | | | Fixes <https://bugs.gnu.org/44626>. Reported by Vagrant Cascadian <vagrant@debian.org>. * tests/build-utils.scm ("wrap-script, simple case"): Pass SCRIPT-CONTENTS to 'display' rather than 'format'. * gnu/services/base.scm (file-system->shepherd-service-name) [valid-characters, mount-point]: New variables. Filter out invalid store file name characters from the mount point of FILE-SYSTEM.
| * Merge branch 'version-1.2.0' of ssh://git.sv.gnu.org/srv/git/guix into ↵Ludovic Courtès2020-11-13
| |\ | | | | | | | | | version-1.2.0
| | * gnu: python-pysam: Update to version 0.16.0.1.Maxim Cournoyer2020-11-13
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | The check phase was failing with: starting phase `check' make: Entering directory '...drv-0/python-pysam-0.15.1-checkout/tests/pysam_data' samtools faidx ex1.fa samtools import ex1.fa.fai ex1.sam.gz ex1.bam [main] "samtools import" has been removed. Please use "samtools view" instead. make: *** [Makefile:56: ex1.bam] Error 1 * gnu/packages/bioinformatics.scm (python-pysam): Update to version 0.16.0.1. [phases]{check}: Delete a couple more failing test files. [native-inputs]: Add python-pytest.
| * | gnu: guix: Update to 3ba6ffd.Ludovic Courtès2020-11-13
| | |
| * | gnu: guix: Update to 1.2.0rc1.Ludovic Courtès2020-11-13
| | |
| * | gnu: glib: Graft patch to detect changes to the installed applications.Ludovic Courtès2020-11-13
| |/ | | | | | | | | | | | | | | | | | | | | Fixes <https://bugs.gnu.org/35594>. Reported by sirgazil <sirgazil@zoho.com> and others. * gnu/packages/patches/glib-appinfo-watch.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/glib.scm (glib)[replacement]: New field. (glib-with-gio-patch): New variable. (glib-with-documentation): Use 'package/inherit'.
| * gnu: python-flask-basicauth: Fix indentation.Maxim Cournoyer2020-11-12
| | | | | | | | * gnu/packages/python-web.scm (python-flask-basicauth): Fix indentation.
| * gnu: python-flask-basicauth: Fix build.Maxim Cournoyer2020-11-12
| | | | | | | | | | * gnu/packages/python-web.scm (python-flask-basicauth)[phases]: Add a 'fix-imports phase.
* | gnu: snap: Update to 6.3.3.Nicolas Goaziou2020-11-17
| | | | | | | | * gnu/packages/education.scm (snap): Update to 6.3.3.
* | gnu: units: Update to 2.21.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | * gnu/packages/maths.scm (units): Update to 2.21.
* | gnu: python-parted: Update to 3.11.7.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | * gnu/packages/disk.scm (python-parted): Update to 3.11.7.
* | gnu: oath-toolkit: Update to 2.6.4.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | * gnu/packages/authentication.scm (oath-toolkit): Update to 2.6.4.
* | gnu: nnn: Update to 3.5.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | * gnu/packages/admin.scm (nnn): Update to 3.5.
* | system: vm: Remove unused system-disk-image-in-vm.Maxim Cournoyer2020-11-17
| | | | | | | | | | | | * gnu/system/vm.scm (system-disk-image-in-vm): Remove. Reported-by: Ludovic Courtès <ludo@gnu.org>
* | bootloader: grub: Skip install-grub-efi when producing a disk image.Maxim Cournoyer2020-11-17
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Fixes <http://issues.guix.gnu.org/44353>. Every bootloader should try their best to install themselves using only the MOUNT-POINT and otherwise do nothing. This requirement comes from the necessity to call INSTALL-GRUB when installing the (non-EFI) GRUB bootloader, which needs to populate the root file system with extra modules that cannot be fit in the core.img file, limited in size to 491520 bytes (by the i386-pc format required for legacy BIOS compatibility). As introducing bootloader knowledge at the level of the image code is undesirable, every bootloader should be adapted to support this fall-back for their installation procedure (TODO). * gnu/bootloader/grub.scm (install-grub-efi)[efi-dir]: Skip when the EFI-DIR argument is set to #f.
* | image: Remove conflicting user-provided EFI file system.Maxim Cournoyer2020-11-17
| | | | | | | | | | | | | | | | | | | | | | When the image type is "raw" or derived from it (such as "qcow2"), an ESP partition and file system is already added by the image generator. If a conflicting user-provided EFI file system is provided, it causes the boot to fail, as happens for the lightweight-desktop.tmpl and desktop.tmpl templates under gnu/system/examples. * gnu/system/image.scm (operating-system-for-image): Remove file systems whose mount point is "/boot/efi".
* | gnu: Add astroid.Tanguy Le Carrour2020-11-17
| | | | | | | | | | | | | | * gnu/packages/mail.scm (astroid): New variable. Co-authored with Efraim Flashner <efraim@flashner.co.il>. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* | gnu: gmime: Enable introspection.Tanguy Le Carrour2020-11-17
| | | | | | | | | | | | | | | | * gnu/packages/mail.scm (gmime)[arguments]: Add the "--enable-introspection" flag to configure-flags. [native-inputs]: Add gobject-introspection. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* | gnu: libhandy: Update to 1.0.2.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | * gnu/packages/gnome.scm (libhandy): Update to 1.0.2.
* | gnu: libhandy: Update home page.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | * gnu/packages/gnome.scm (libhandy)[home-page]: Update.
* | gnu: arc-theme: Add missing configure flag.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | | | * gnu/packages/gnome.scm (arc-theme)[arguments]: Add ‘--disable-cinnamon’ to #:configure-flags.
* | gnu: node@10.22: Update to 10.22.1.Jonathan Brielmaier2020-11-17
| | | | | | | | * gnu/packages/node.scm (node-10.22): Update to 10.22.1.
* | installer: Fix device synchronization.Mathieu Othacehe2020-11-17
| | | | | | | | | | | | | | | | | | | | | | | | | | Reported by Florian Pelz: https://lists.gnu.org/archive/html/guix-devel/2020-11/msg00326.html. * gnu/installer/utils.scm (call-with-time): New procedure, (let/time): new macro. * gnu/installer/parted.scm (with-delay-device-in-use?): Increase the retry count to 16. (non-install-devices): Remove the call to with-delay-device-in-use? as it doesn't return the expected result, and would block much longer now. (free-parted): Log the time required to sync each device.
* | gnu: tomb: Update to 2.8.Eric Bavier2020-11-17
| | | | | | | | | | | | | | | | | | Fixes CVE-2020-28638. * gnu/packages/crypto.scm (tomb): Update to 2.8 [source]: Remove obsolete patch. * gnu/packages/patches/tomb-fix-errors-on-open.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* | gnu: bootloader: efi-bootloader-chain: Allow multiple HOOKS.Stefan2020-11-17
| | | | | | | | | | | | | | * gnu/bootloader.scm (efi-bootloader-profile): Allow multiple HOOKS. (efi-bootloader-chain): Allow multiple HOOKS. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* | gnu: emacs-helm: Update to 3.7.0.Pierre Neidhardt2020-11-17
| | | | | | | | * gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.7.0.
* | gnu: emacs-djvu: Update to 1.1.1.Nicolas Goaziou2020-11-17
| | | | | | | | * gnu/packages/emacs-xyz.scm (emacs-djvu): Update to 1.1.1.
* | gnu: enet: Update to 1.3.17.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | * gnu/packages/networking.scm (enet): Update to 1.3.17.
* | gnu: mpop: Update to 1.4.11.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | * gnu/packages/mail.scm (mpop): Update to 1.4.11.
* | gnu: livemedia-utils: Cross-compile.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | | | * gnu/packages/video.scm (livemedia-utils)[arguments]: Use CC-FOR-TARGET and CXX-FOR-TARGET.
* | gnu: livemedia-utils: Update to 2020.11.05.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | | | * gnu/packages/video.scm (livemedia-utils): Update to 2020.11.05. [inputs]: Add openssl.
* | gnu: wireguard-linux-compat: Update to 1.0.20201112.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | | | * gnu/packages/vpn.scm (wireguard-linux-compat): Update to 1.0.20201112. [arguments]: Build with linux-libre-5.4.
* | gnu: arc-theme: Update to 20201013.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | | | * gnu/packages/gnome.scm (arc-theme): Update to 20201013. [source]: Use new upstream.
* | gnu: python-pypika: Update to 0.44.0.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | * gnu/packages/databases.scm (python-pypika): Update to 0.44.0.
* | gnu: python-peewee: Update to 3.14.0.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | * gnu/packages/databases.scm (python-peewee): Update to 3.14.0.
* | gnu: xsimd: Define SIMD.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | * gnu/packages/cpp.scm (xsimd)[description]: Expand the @acronym.
* | gnu: xsimd: Update to 7.4.9.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | * gnu/packages/cpp.scm (xsimd): Update to 7.4.9.
* | gnu: gnu-pw-mgr: Update to 2.7.4.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | * gnu/packages/gnu-pw-mgr.scm (gnu-pw-mgr): Update to 2.7.4.
* | gnu: youtube-dl: Update to 2020.11.17.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | * gnu/packages/video.scm (youtube-dl): Update to 2020.11.17.
* | gnu: pdfpc: Update to 4.4.1.Tobias Geerinckx-Rice2020-11-17
| | | | | | | | * gnu/packages/pdf.scm (pdfpc): Update to 4.4.1.
* | gnu: z3: Update to 4.8.9.Martin Becze2020-11-16
| | | | | | | | | | | | * gnu/packages/maths.scm (z3): Update to 4.8.9. Signed-off-by: Christopher Baines <mail@cbaines.net>
* | gnu: git: Add phase to restore hooks shebang.Miguel Ángel Arruga Vivas2020-11-16
| | | | | | | | | | | | | | Fixes <https://bugs.gnu.org/25508>. * gnu/packages/version-control.scm (git)[arguments]: New phase restore-sample-hooks-shebang.
* | gnu: grub: Cross-compile for mips64el-linux.Efraim Flashner2020-11-16
| | | | | | | | | | | | * gnu/packages/bootloaders.scm (grub)[arguments]: Add custom phase to set BUILD_FREETYPE_* flags. [native-inputs]: Add freetype.
* | gnu: grub: Don't run tests when cross compiling.Efraim Flashner2020-11-16
| | | | | | | | | | * gnu/packages/bootloaders.scm (grub)[arguments]: Skip tests when cross-compiling.
* | gnu: Add emacs-boon.AuPath2020-11-16
| | | | | | | | | | | | * gnu/packages/emacs-xyz.scm (emacs-boon): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
* | gnu: Add emacs-modalka.AuPath2020-11-16
| | | | | | | | | | | | * gnu/packages/emacs-xyz.scm (emacs-modalka): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
generated by cgit v1.2.3 (git 2.45.2) at 2024-07-20 01:33:38 +0000