| Commit message (Collapse) | Author | Age |
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* gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update.
(icecat-source): Update upstream source hash.
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* gnu/packages/version-control.scm (python-hg-evolve): Update to 10.3.1.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/sphinx.scm (python-sphinx-gallery): Update to 0.9.0.
[source]: Build from PyPI.
[arguments]: Enable tests. Add custom 'check phase and phase to make
test files writable.
[native-inputs]: Add python-joblib, python-matplotlib, python-numpy,
python-pillow, python-pytest, python-pytest-cov, python-sphinx. Remove
python-pytest-runner.
[home-page]: Follow redirect.
(python2-sphinx-gallery): Remove package.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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Fixes CVE-2021-29477.
* gnu/packages/databases.scm (redis): Update to 6.2.4.
[arguments]: Disable the 'integration/failover' test.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/maths.scm (frama-c): New variable.
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* gnu/packages/maths.scm (why3): New variable.
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Fix the broken build with linux-libre 5.12.
* gnu/packages/linux.scm (rtl8821ce-linux-module): Update to 0.0.0-3.897e7c4.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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Previously, '&inferior-exception' raised by 'upgrade-shepherd-services'
and co. would go through as-is, leaving users with an ugly backtrace.
* gnu/machine/ssh.scm (deploy-managed-host): Define
'eval/error-handling' and use it in lieu of EVAL as arguments to
'switch-to-system', 'upgrade-shepherd-services', and
'install-bootloader'.
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* gnu/services/cuirass.scm (<cuirass-remote-server-configuration>)
(<cuirass-configuration>, <cuirass-remote-worker-configuration>): Do not
export.
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* gnu/services/cuirass.scm (cuirass-activation): Create
/var/guix/profiles/per-user/cuirass/cuirass or similar.
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* configure.ac: Require Guile 3.0.
* doc/guix.texi (Requirements): Adjust accordingly.
* gnu/packages/package-management.scm (guile2.2-guix): Remove.
* guix/lint.scm (exception-with-kind-and-args?): Remove 'cond-expand'.
* guix/scripts/deploy.scm (deploy-machine*): Likewise.
* guix/store.scm (call-with-store): Likewise.
* guix/swh.scm (http-get*, http-post*): Likewise.
* guix/ui.scm (without-compiler-optimizations, guard*)
(call-with-error-handling): Likewise.
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* gnu/packages/llvm.scm (llvm-7): Update to 7.1.0.
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* gnu/packages/dns.scm (unbound)[inputs]: Add NGHTTP2:LIB.
[arguments]: Add "--with-libnghttp2" to #:configure-flags.
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* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for 91.
(%chromium-version): Set to 91.0.4472.77.
(%ungoogled-revision): Set to 91.0.4472.77-1-0-g6802c88.
(%debian-patches): Remove obsolete patch.
(%ungoogled-origin): Update hash.
(ungoogled-chromium-snippet): Add substitution for an unbundling file.
(ungoogled-chromium): Update hash.
[arguments]: Add a substitution previously provided by a Debian patch.
[inputs]: Change from ICU-68 to ICU-69.
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* gnu/packages/icu4c.scm (icu4c-69): New public variable.
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* gnu/packages/gcc.scm (gcc-9): Update to 9.4.0.
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This fixes an issue wherein the palettes sidebar would turn up empty.
* gnu/packages/music.scm (musescore)[build-system]: Use qt-build-systems.
[inputs]: Add qtgraphicaleffects.
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* gnu/packages/rust-apps.scm (rust-cbindgen-0.17): Update to 0.19.0 and
rename to rust-cbindgen-0.19.
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* gnu/tests/web.scm (run-hpcguix-web-server-test): Increase the VM memory size
and add retries for the http-get test.
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* gnu/packages/bioinformatics.scm (bamutils): New variable.
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* gnu/packages/lisp.scm (sbcl): Update to 2.1.5.
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* gnu/packages/python-science.scm (python-vedo): New variable.
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* gnu/packages/image-processing.scm (vtk)[inputs]: Add python.
[arguments]: Add VTK_WRAP_PYTHON and VTK_PYTHON_VERSION flags.
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* gnu/packages/package-management.scm (guix): Update to 1.3.0-3.50dfbbf.
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* gnu/packages/python-xyz.scm (python-sinfo): New variable.
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* gnu/packages/python-xyz.scm (python-stdlib-list): New variable.
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* gnu/packages/package-management.scm (guix-build-coordinator): Update to 0-30.f9af463.
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* gnu/services/dns.scm (dnsmasq-activation): New procedure …
(dnsmasq-service-type): … use it.
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* gnu/services/networking.scm (hostapd-shepherd-services): Replace
'hostapd' by the package specified in the configuration.
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* gnu/tests/linux-modules.scm
(run-loadable-kernel-modules-service-test): Actually load the modules
with kernel-module-loader-service-type. Use a singleton service instead
of defining a custom one.
* doc/guix.texi (Service Reference): To give an example of
linux-loadable-module-service-type use a singleton instead of defining a
new service.
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* gnu/packages/emacs-xyz.scm (emacs-tramp): Update to 2.5.0.5.
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* gnu/packages/emacs-xyz.scm (emacs-solaire-mode): Update to 2.0.0.
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* gnu/packages/text-editors.scm (texmacs): Update to 1.99.21.
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* gnu/packages/emacs-xyz.scm (emacs-moody): Update to 0.5.5.
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* gnu/packages/emacs-xyz.scm (emacs-posframe): Update to 1.0.3.
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* gnu/packages/web-browsers.scm (lagrange): Update to 1.5.0.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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* gnu/packages/emacs-xyz.scm (emacs-eyebrowse): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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* gnu/packages/python-xyz.scm (python-easy-ansi): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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* gnu/packages/emacs-xyz.scm (emacs-evil-paredit): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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* gnu/packages/games.scm (tome4): Update to 1.7.3.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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* gnu/packages/bioinformatics.scm (bits)[version]: Use git-version.
[source]: Use git-file-name.
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* gnu/packages/bioinformatics.scm (piranha)[version]: Use git-version.
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* gnu/packages/bioinformatics.scm (r-chipkernels)[version]: Use git-version.
[source]: Use git-file-name.
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* gnu/packages/bioinformatics.scm (f-seq)[version]: Use git-version.
[source]: Use git-file-name.
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* gnu/packages/bioinformatics.scm (bismark)[source]: Use git-file-name.
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* gnu/packages/bioinformatics.scm (filevercmp)[version]: Use git-version; bind
"revision" in outer let.
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* gnu/packages/bioconductor.scm (r-chipseeker): Move the package from the
"experiment" section to the section for regular Bioconductor packages.
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* gnu/packages/bioinformatics.scm (r-spp): Move from here...
* gnu/packages/bioconductor.scm (r-spp): ...to here.
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* gnu/packages/bioconductor.scm (r-geneoverlap): Move the package definition
out of the "experiment" section into the section for regular Bioconductor
packages.
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* gnu/packages/bioinformatics.scm (r-phantompeakqualtools): Bind the commit
outside of the package value.
[version]: Use git-version.
[source]: Use git-file-name.
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