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* gnu: emacs: Wrap EMACSLOADPATH.Leo Prikler2021-05-01
| | | | | | | | | | | | With this, the search path specification of EMACSLOADPATH does no longer depend on the version of Emacs, which should make upgrading major versions less painful. See also: - <https://bugs.gnu.org/43627> - <https://bugs.gnu.org/47458> * gnu/packages/emacs.scm (emacs)[#:phases]: Add ‘wrap-load-path’. [native-search-path]<EMACSLOADPATH>: Do not search for builtin libraries. (emacs-next)[native-search-path]: Inherit from emacs.
* gnu: sbcl: Update to 2.1.4.Pierre Neidhardt2021-05-01
| | | | * gnu/packages/lisp.scm (sbcl): Update to 2.1.4.
* gnu: soci: Update to 4.0.2.Tobias Geerinckx-Rice2021-05-01
| | | | * gnu/packages/databases.scm (soci): Update to 4.0.2.
* gnu: qutebrowser: Update to 2.2.1.Tobias Geerinckx-Rice2021-05-01
| | | | * gnu/packages/web-browsers.scm (qutebrowser): Update to 2.2.1.
* gnu: httpd: Update to 2.4.47.Tobias Geerinckx-Rice2021-05-01
| | | | * gnu/packages/web.scm (httpd): Update to 2.4.47.
* gnu: php: Update to 7.4.18.Tobias Geerinckx-Rice2021-05-01
| | | | | * gnu/packages/php.scm (php): Update to 7.4.18. [arguments]: Delete yet another failing test (proc_nice_basic).
* gnu: khal: Update to 0.10.3.Tobias Geerinckx-Rice2021-05-01
| | | | * gnu/packages/calendar.scm (khal): Update to 0.10.3.
* gnu: diffoscope: Update to 173.Tobias Geerinckx-Rice2021-05-01
| | | | * gnu/packages/diffoscope.scm (diffoscope): Update to 173.
* gnu: mailcap: Update to 2.1.53.Tobias Geerinckx-Rice2021-05-01
| | | | * gnu/packages/mail.scm (mailcap): Update to 2.1.53.
* gnu: srt: Update to 1.4.3.Tobias Geerinckx-Rice2021-05-01
| | | | * gnu/packages/networking.scm (srt): Update to 1.4.3.
* gnu: ustr: Omit static libraries.Tobias Geerinckx-Rice2021-05-01
| | | | | * gnu/packages/textutils.scm (ustr)[arguments]: Add a new 'omit-static-libraries phase.
* gnu: emacs-marginalia: Update to 0.5.Nicolas Goaziou2021-04-30
| | | | * gnu/packages/emacs-xyz.scm (emacs-marginalia): Update to 0.5.
* gnu: emacs-consult: Update to 0.7.Nicolas Goaziou2021-04-30
| | | | * gnu/packages/emacs-xyz.scm (emacs-consult): Update to 0.7.
* gnu: emacs-which-key: Update to 3.5.2.Oleg Pykhalov2021-04-30
| | | | * gnu/packages/emacs-xyz.scm (emacs-which-key): Update to 3.5.2.
* gnu: Add pbgzip.Roel Janssen2021-04-30
| | | | * gnu/packages/bioinformatics.scm (pbgzip): New variable.
* Merge branch 'wip-ungrafting'Ludovic Courtès2021-04-30
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| * Merge remote-tracking branch 'origin/master' into wip-ungraftingLudovic Courtès2021-04-29
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| * | gnu: GnuTLS: Absorb grafted replacement.Leo Famulari2021-04-16
| | | | | | | | | | | | | | | | | | | | | * gnu/packages/tls.scm (gnutls)[source]: Add 'gnutls-CVE-2021-20231.patch' and 'gnutls-CVE-2021-20232.patch'. [replacement]: Remove field. (gnutls/fixed): Remove variable.
| * | gnu: Python: Absorb grafted replacement.Leo Famulari2021-04-16
| | | | | | | | | | | | | | | | | | | | | * gnu/packages/python.scm (python-3.8)[source]: Add 'python-3.8-CVE-2021-3177.patch'. [replacement]: Remove field. (python-3.8/fixed): Remove variable.
| * | gnu: Python 2: Absorb grafted replacement.Leo Famulari2021-04-16
| | | | | | | | | | | | | | | | | | | | | * gnu/packages/python.scm (python-2.7)[source]: Add 'python-2.7-CVE-2021-3177.patch'. [replacement]: Remove field. (python-2.7/fixed): Remove variable.
| * | gnu: cyrus-sasl: Absorb grafted replacement.Leo Famulari2021-04-16
| | | | | | | | | | | | | | | | | | | | | * gnu/packages/cyrus-sasl.scm (cyrus-sasl)[source]: Use cyrus-sasl-CVE-2019-19906.patch. [replacement]: Remove field. (cyrus-sasl/fixed): Remove variable.
| * | gnu: libcroco: Absorb grafted replacement.Leo Famulari2021-04-16
| | | | | | | | | | | | | | | | | | * gnu/packages/gnome.scm (libcroco)[source]: Use libcroco-CVE-2020-12825.patch. [replacement]: Remove field. (libcroco/fixed): Remove variable.
| * | gnu: cairo: Absorb grafted replacement.Leo Famulari2021-04-16
| | | | | | | | | | | | | | | | | | | | | * gnu/packages/gtk.scm (cairo)[source]: Use cairo-CVE-2018-19876.patch and cairo-CVE-2020-35492.patch. [replacement]: Remove field. (cairo/fixed): Remove variable.
| * | gnu: gdk-pixbuf: Absorb grafted replacement.Leo Famulari2021-04-16
| | | | | | | | | | | | | | | | | | | | | * gnu/packages/gtk.scm (gdk-pixbuf)[source]: Use gdk-pixbuf-CVE-2020-29385.patch. [replacement]: Remove field. (gdk-pixbuf/fixed): Remove variable.
| * | gnu: OpenSSL: Absorb grafted replacement.Leo Famulari2021-04-16
| | | | | | | | | | | | | | | | | | * gnu/packages/tls.scm (openssl): Update to 1.1.1j. [replacement]: Remove field. (openssl/fixed): Remove variable.
* | | gnu: xfce4-settings: Add gsettings-desktop-schemas.Brendan Tildesley2021-04-30
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/xfce.scm (xfce4-settings):[propagated-inputs]: Add gsettings-desktop-schemas. This makes it appear in the system profile via the xfce service. This fixes a bug where changing icon theme causes xfce4-appearance-settings to crash with the error: GLib-GIO-ERROR **: 15:41:45.828: Settings schema 'org.gnome.desktop.interface' is not installed Trace/breakpoint trap Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* | | gnu: emacs-xref: Fix ELPA URL.Xinglu Chen2021-04-30
| | | | | | | | | | | | | | | | | | | | | * gnu/packages/emacs-xyz.scm (emacs-xref)[source]: Use “.tar” instead of “.el” in the URL. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
* | | gnu: libsoup: Update home-page.Raghav Gururajan2021-04-30
| | | | | | | | | | | | | | | | | | * gnu/packages/gnome.scm (libsoup)[home-page]: Modify. Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
* | | gnu: libsoup: Adjust inputs.Raghav Gururajan2021-04-30
| | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/gnome.scm (libsoup)[inputs]: Add samba and move glib-networking to ... [propagated-inputs]: ... here. Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
* | | gnu: emacs-xref: Update to 1.1.0.Nicolas Goaziou2021-04-30
| | | | | | | | | | | | * gnu/packages/emacs-xyz.scm (emacs-xref): Update to 1.1.0.
* | | gnu: emacs-tramp: Update to 2.5.0.4.Nicolas Goaziou2021-04-30
| | | | | | | | | | | | * gnu/packages/emacs-xyz.scm (emacs-tramp): Update to 2.5.0.4.
* | | gnu: emacs-auctex: Update to 13.0.11.Nicolas Goaziou2021-04-30
| | | | | | | | | | | | * gnu/packages/emacs-xyz.scm (emacs-auctex): Update to 13.0.11.
* | | gnu: emacs-project: Update to 0.6.0.Nicolas Goaziou2021-04-30
| | | | | | | | | | | | * gnu/packages/emacs-xyz.scm (emacs-project): Update to 0.6.0.
* | | gnu: Add aspell-dict-ro.Sergiu Ivanov2021-04-30
| | | | | | | | | | | | | | | | | | * gnu/packages/aspell.scm (aspell-dict-ro): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu>
* | | gnu: Add cl-bknr-datastore.Sharlatan Hellseher2021-04-30
| | | | | | | | | | | | | | | | | | | | | * gnu/packages/lisp-xyz.scm (cl-bknr-datastore, sbcl-bknr-datastore): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* | | gnu: Add cl-unit-test.Sharlatan Hellseher2021-04-30
| | | | | | | | | | | | | | | | | | | | | * gnu/packages/lisp-xyz.scm (cl-unit-test, ecl-unit-test, sbcl-unit-test): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* | | gnu: vim-fugitive: Update to 3.3.Efraim Flashner2021-04-29
| | | | | | | | | | | | * gnu/packages/vim.scm (vim-fugitive): Update to 3.3.
* | | gnu: vim-asyncrun: Update to 2.8.6.Efraim Flashner2021-04-29
| | | | | | | | | | | | * gnu/packages/vim.scm (vim-asyncrun): Update to 2.8.6.
* | | gnu: emacs-elfeed: Update to 3.4.1.Oleg Pykhalov2021-04-29
| | | | | | | | | | | | * gnu/packages/emacs-xyz.scm (emacs-elfeed): Update to 3.4.1.
* | | gnu: nano: Update to 5.7.Efraim Flashner2021-04-29
| | | | | | | | | | | | * gnu/packages/nano.scm (nano): Update to 5.7.
* | | gnu: mpfrcx: Update to 0.6.1.Andreas Enge2021-04-29
| |/ |/| | | | | * gnu/packages/algebra.scm (mpfrcx): Update to 0.6.1.
* | gnu: bigloo: Update to 4.3g.Guillaume Le Vaillant2021-04-29
| | | | | | | | | | | | | | * gnu/packages/scheme.scm (bigloo): Update to 4.3g. [source]: Remove bundled libunistring and pcre. [arguments]: Add 'fix-gmp-detection' phase. Add options to 'configure' phase to throw an error when gmp is not found.
* | gnu: Update bedtools to 2.30.0.Roel Janssen2021-04-29
| | | | | | | | | | * gnu/packages/bioinformatics.scm (bedtools): Update to 2.30.0, [inputs]: Use latest samtools.
* | gnu: Update samtools to 1.12.Roel Janssen2021-04-29
| | | | | | | | * gnu/packages/bioinformatics.scm (samtools): Update to 1.12.
* | gnu: Update bcftools to 1.12.Roel Janssen2021-04-29
| | | | | | | | * gnu/packages/bioinformatics.scm (bcftools): Update to 1.12.
* | gnu: htslib: Update to 1.12.Roel Janssen2021-04-29
| | | | | | | | * gnu/packages/bioinformatics.scm (htslib): Update to 1.12.
* | gnu: kmscon: Fix layout setup.Mathieu Othacehe2021-04-29
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Kmscon may discover multiple inputs, corresponding to multiple devices. This means that the uxkb_dev_keymap_update function may be called multiple times, and the FIFO is registered on each input poll loop. When a new layout is written on the FIFO by the installer, the first input picking up the message, will apply the new layout. However, that input may not be the input that the user is currently using. To fix it, register the FIFO on the first input poll loop, but apply the new layout on all the inputs in the uxkb_keymap_update_handler function. * gnu/packages/patches/kmscon-runtime-keymap-switch.patch (uxkb_keymap_update_handler): Apply the new layout to all the inputs. (input_new_dev): Register the FIFO fd only on the first input poll loop.
* | gnu: Add r-qpcr.Ricardo Wurmus2021-04-29
| | | | | | | | * gnu/packages/cran.scm (r-qpcr): New variable.
* | gnu: git-annex: Update to 8.20210428.Kyle Meyer2021-04-29
| | | | | | | | | | | | * gnu/packages/haskell-apps.scm (git-annex): Update to 8.20210428. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* | gnu: oil: Update to 0.8.10.Ryan Prior2021-04-29
| | | | | | | | | | | | * gnu/packages/shells.scm (oil): Update to 0.8.10. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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