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* Merge branch 'master' into core-updatesMark H Weaver2015-06-18
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| * gnu: guix: Update snapshot.Mark H Weaver2015-06-18
| | | | | | | | * gnu/packages/package-management.scm (guix-devel): Update to 684bf7c.
| * gnu: Add diamond.Ben Woodcroft2015-06-17
| | | | | | | | * gnu/packages/bioinformatics.scm (diamond): New variable.
| * Move 'specification->package+output' to (gnu packages).Ludovic Courtès2015-06-18
| | | | | | | | | | | | * guix/scripts/package.scm (specification->package+output): Move to... * gnu/packages.scm (specification->package+output): ... here * guix/scripts/archive.scm (guix): Adjust accordingly.
| * install: Turn off deduplication for the binary tarball.Ludovic Courtès2015-06-18
| | | | | | | | | | | | | | | | * gnu/build/install.scm (register-closure): Add #:deduplicate? parameter and honor it. (populate-single-profile-directory): Likewise. * gnu/system/install.scm (self-contained-tarball): Pass #:deduplicate? #f. Invoke tar with --check-links.
| * gnu: ocaml: Don't rely on (gnu packages commencement).Ludovic Courtès2015-06-18
| | | | | | | | | | * gnu/packages/ocaml.scm (ocaml)[inputs]: Use (canonical-package gcc-4.8) instead of GCC-FINAL.
| * gnu: guix: Update snapshot.Mark H Weaver2015-06-17
| | | | | | | | * gnu/packages/package-management.scm (guix-devel): Update to 2c04921.
| * gnu: miso: Use HTTPS URL.Ricardo Wurmus2015-06-17
| | | | | | | | | | * gnu/packages/bioinformatics.scm (miso)[source]: Use "https" protocol for downloading the source tarball.
| * gnu: bedops: Update to 2.4.14.Ricardo Wurmus2015-06-17
| | | | | | | | * gnu/packages/bioinformatics.scm (bedops): Update to 2.4.14.
| * gnu: Add wayland.宋文武2015-06-17
| | | | | | | | * gnu/packages/freedesktop.scm (wayland): New variable.
| * system: Rename 'sudoers' into 'sudoers-file'.Alex Kost2015-06-16
| | | | | | | | | | | | | | * gnu/system.scm (<operating-system>): Rename record field. (etc-directory): Rename argument. (operating-system-etc-directory): Adjust accordingly. * doc/guix.texi (operating-system Reference): Likewise.
| * gnu: talloc: Change source URI to use https.Mark H Weaver2015-06-16
| | | | | | | | * gnu/packages/samba.scm (talloc)[source]: Change URI to use https.
| * gnu: qt: Add more inputs.宋文武2015-06-16
| | | | | | | | * gnu/packages/qt.scm (qt)[inputs]: Add cups, libmng, postgresql and unixodbc.
| * gnu: Add libmng.宋文武2015-06-16
| | | | | | | | * gnu/packages/image.scm (libmng): New variable.
| * gnu: qt: Update to 5.4.2.宋文武2015-06-16
| | | | | | | | * gnu/packages/qt.scm (qt): Update to 5.4.2.
| * gnu: qt-4: Update to 4.8.7.宋文武2015-06-16
| | | | | | | | * gnu/packages/qt.scm (qt-4): Update to 4.8.7.
| * gnu: talloc: Update to 2.1.2.宋文武2015-06-16
| | | | | | | | * gnu/packages/samba.scm (talloc): Update to 2.1.2.
| * gnu: calibre: Update to 2.30.0.Andreas Enge2015-06-16
| | | | | | | | * gnu/packages/ebook.scm (calibre): Update to 2.30.0.
* | gnu: cpio: Fix symlink-bad-length test.Mark H Weaver2015-06-17
| | | | | | | | | | | | * gnu/packages/patches/cpio-fix-symlink-bad-length-test.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/cpio.scm (cpio): Add patch.
* | gnu: libtiff: Add fixes for several CVEs.Mark H Weaver2015-06-16
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/libtiff-CVE-2012-4564.patch, gnu/packages/patches/libtiff-CVE-2013-1960.patch, gnu/packages/patches/libtiff-CVE-2013-1961.patch, gnu/packages/patches/libtiff-CVE-2013-4231.patch, gnu/packages/patches/libtiff-CVE-2013-4232.patch, gnu/packages/patches/libtiff-CVE-2013-4243.patch, gnu/packages/patches/libtiff-CVE-2013-4244.patch, gnu/packages/patches/libtiff-CVE-2014-8127-pt1.patch, gnu/packages/patches/libtiff-CVE-2014-8127-pt2.patch, gnu/packages/patches/libtiff-CVE-2014-8127-pt3.patch, gnu/packages/patches/libtiff-CVE-2014-8127-pt4.patch, gnu/packages/patches/libtiff-CVE-2014-8128-pt1.patch, gnu/packages/patches/libtiff-CVE-2014-8128-pt2.patch, gnu/packages/patches/libtiff-CVE-2014-8128-pt3.patch, gnu/packages/patches/libtiff-CVE-2014-8128-pt4.patch, gnu/packages/patches/libtiff-CVE-2014-8128-pt5.patch, gnu/packages/patches/libtiff-CVE-2014-8129.patch, gnu/packages/patches/libtiff-CVE-2014-9330.patch, gnu/packages/patches/libtiff-CVE-2014-9655.patch: New files. * gnu-system.am (dist_patch_DATA): Add them. * gnu/packages/image.scm (libtiff)[source]: Add patches.
* | Merge branch 'master' into core-updatesMark H Weaver2015-06-16
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| * gnu: qemu: Add fixes for CVE-2015-{4037,4103,4104,4105,4106}.Mark H Weaver2015-06-16
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/qemu-CVE-2015-4037.patch, gnu/packages/patches/qemu-CVE-2015-4103.patch, gnu/packages/patches/qemu-CVE-2015-4104.patch, gnu/packages/patches/qemu-CVE-2015-4105.patch, gnu/packages/patches/qemu-CVE-2015-4106-pt1.patch, gnu/packages/patches/qemu-CVE-2015-4106-pt2.patch, gnu/packages/patches/qemu-CVE-2015-4106-pt3.patch, gnu/packages/patches/qemu-CVE-2015-4106-pt4.patch, gnu/packages/patches/qemu-CVE-2015-4106-pt5.patch, gnu/packages/patches/qemu-CVE-2015-4106-pt6.patch, gnu/packages/patches/qemu-CVE-2015-4106-pt7.patch, gnu/packages/patches/qemu-CVE-2015-4106-pt8.patch: New files. * gnu-system.am (dist_patch_DATA): Add them. * gnu/packages/qemu.scm (qemu-headless)[source]: Add patches.
| * gnu: git: Update to 2.4.3.Mark H Weaver2015-06-16
| | | | | | | | * gnu/packages/version-control.scm (git, git-manpages): Update to 2.4.3.
| * gnu: ffmpeg: Update to 2.7.Mark H Weaver2015-06-15
| | | | | | | | | | * gnu/packages/video.scm (ffmpeg): Update to 2.7. [native-inputs]: Add texinfo.
| * gnu: Add ruby-multipart-post.David Thompson2015-06-15
| | | | | | | | * gnu/packages/ruby.scm (ruby-multipart-post): New variable.
| * gnu: Add ruby-slop.David Thompson2015-06-15
| | | | | | | | * gnu/packages/ruby.scm (ruby-slop): New variable.
| * gnu: Add ruby-git.David Thompson2015-06-15
| | | | | | | | * gnu/packages/ruby.scm (ruby-git): New variable.
| * gnu: Add ruby-minitest-bacon.David Thompson2015-06-15
| | | | | | | | * gnu/packages/ruby.scm (ruby-minitest-bacon): New variable.
| * gnu: Add ruby-minitest-sprint.David Thompson2015-06-15
| | | | | | | | * gnu/packages/ruby.scm (ruby-minitest-sprint): New variable.
| * gnu: Add ruby-minitest.David Thompson2015-06-15
| | | | | | | | * gnu/packages/ruby.scm (ruby-minitest): New variable.
| * gnu: Add ruby-daemons.David Thompson2015-06-15
| | | | | | | | * gnu/packages/ruby.scm (ruby-daemons): New variable.
| * gnu: Add ruby-net-http-persistent.David Thompson2015-06-15
| | | | | | | | * gnu/packages/ruby.scm (ruby-net-http-persistent): New variable.
| * gnu: Add ruby-connection-pool.David Thompson2015-06-15
| | | | | | | | * gnu/packages/ruby.scm (ruby-connection-pool): New variable.
| * gnu: Add ruby-arel.David Thompson2015-06-15
| | | | | | | | * gnu/packages/ruby.scm (ruby-arel): New variable.
| * gnu: Add ruby-bacon.David Thompson2015-06-15
| | | | | | | | * gnu/packages/ruby.scm (ruby-bacon): New variable.
| * gnu: Rename (gnu packages dwm) to (gnu packages suckless).amz32015-06-15
| | | | | | | | | | | | * gnu/packages/dwm.scm: Rename this ... * gnu/packages/suckless.scm: ... to this. * gnu-system.am (GNU_SYSTEM_MODULES): Change dwm.scm to suckless.scm.
| * gnu: Add st.amz32015-06-15
| | | | | | | | * gnu/packages/dwm.scm (st): New variable.
| * services: Remove lsh service from %DESKTOP-SERVICES.Ludovic Courtès2015-06-15
| | | | | | | | | | | | | | | | Suggested by Mark H Weaver and others at <http://lists.gnu.org/archive/html/guix-devel/2015-06/msg00227.html>. * gnu/services/desktop.scm (%desktop-services): Remove call to 'lsh-service'. * doc/guix.texi (Desktop Services): Adjust accordingly.
| * gnu: Add haskell-mode.Federico Beffa2015-06-15
| | | | | | | | * gnu/packages/emacs.scm (haskell-mode): New variable.
| * gnu: python-scikit-learn: Update to 0.16.1.Ricardo Wurmus2015-06-15
| | | | | | | | * gnu/packages/python.scm (python-scikit-learn): Update to 0.16.1.
| * gnu: orfm: Update to 0.4.1.Ricardo Wurmus2015-06-15
| | | | | | | | * gnu/packages/bioinformatics.scm (orfm): Update to 0.4.1.
| * gnu: python-scikit-learn: Use OpenBLAS instead of ATLAS.Ricardo Wurmus2015-06-15
| | | | | | | | | | | | | | * gnu/packages/python.scm (python-scikit-learn)[inputs]: Replace "atlas" with "openblas". * gnu/packages/python.scm (python-scikit-learn)[arguments]: Remove build phase 'set-environment-variables, which is only needed when ATLAS is used.
| * gnu: python-scipy: Build with OpenBLAS and lapack.Ricardo Wurmus2015-06-15
| | | | | | | | | | | | | | * gnu/packages/python.scm (python-scipy)[inputs]: Remove "atlas", add "lapack" and "openblas". * gnu/packages/python.scm (python-scipy)[arguments]: Replace phase "set-environment-variables" with "configure-openblas".
| * gnu: python-numpy-bootstrap: Add lapack to inputs.Ricardo Wurmus2015-06-15
| | | | | | | | | | * gnu/packages/python.scm (python-numpy-bootstrap)[inputs]: Add lapack to inputs, because OpenBLAS does not include lapack functions.
| * gnu: lv2: Update to 1.12.0.Ricardo Wurmus2015-06-15
| | | | | | | | * gnu/packages/audio.scm (lv2): Update to 1.12.0.
| * gnu: screen: Update to 4.3.0.Mark H Weaver2015-06-14
| | | | | | | | * gnu/packages/screen.scm (screen): Update to 4.3.0.
* | gnu: sqlite: Update to 3.8.10.2.Mark H Weaver2015-06-15
| | | | | | | | * gnu/packages/databases.scm (sqlite): Update to 3.8.10.2.
* | gnu: tar: Skip tests that rely on undefined unlinkat(2) behavior.Ludovic Courtès2015-06-16
| | | | | | | | | | | | | | | | | | Fixes <http://bugs.gnu.org/20597>. Reported by Andrew Patterson <ajpatter@uwaterloo.ca>. * gnu/packages/patches/tar-skip-unreliable-tests.patch: New file. * gnu/packages/base.scm (tar)[source](patches): Add it. * gnu-system.am (dist_patch_DATA): Add it.
* | gnu: gettext: Fix non-deterministic msgunfmt behavior.Ludovic Courtès2015-06-15
| | | | | | | | | | | | | | | | Suggested by Alírio Eyng <alirioeyng@gmail.com>. * gnu/packages/patches/gettext-msgunfmt.patch: New file. * gnu/packages/gettext.scm (gnu-gettext)[source]: Use it. * gnu-system.am (dist_patch_DATA): Add it.
* | gnu: make-bootstrap: Build libbacktrace, required by cc1.Ludovic Courtès2015-06-15
| | | | | | | | | | | | | | Fixes <http://hydra.gnu.org/build/506982/nixlog/1/tail-reload>. * gnu/packages/make-bootstrap.scm (%gcc-static): Remove --disable-libbacktrace. It is needed by cc1-checksum.
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