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* gnu: r-nloptr: Update package hash.Efraim Flashner2017-10-26
| | | | | | | The source was repacked and reuploaded without incrementing the version number. The difference was windows line endings on the windows files. * gnu/packages/statistics.scm (r-nloptr)[source]: Update package hash.
* gnu: Add r-forcats.Kyle Meyer2017-10-25
| | | | | | * gnu/packages/statistics.scm (r-forcats): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* Use HTTPS for bioconductor.org.Tobias Geerinckx-Rice2017-10-21
| | | | | | | | | | | | | | | | | | | | | | | | | | | | * doc/guix.texi (Invoking guix import, Invoking guix refresh): Use HTTPS for bioconductor.org URLs. * gnu/packages/bioinformatics.scm (r-annotate, r-geneplotter, r-genefilter) (r-deseq2, r-dexseq, r-annotationforge, r-rbgl, r-gseabase, r-category) (r-gostats, r-shortread, r-biocgenerics, r-biocinstaller, r-biocviews) (r-biocstyle, r-bioccheck, r-s4vectors, r-iranges, r-genomeinfodbdata) (r-genomeinfodb, r-xvector, r-genomicranges, r-biobase, r-annotationdbi) (r-biomart, r-biocparallel, r-biostrings, r-rsamtools, r-delayedarray) (r-summarizedexperiment, r-genomicalignments, r-rtracklayer) (r-genomicfeatures, r-graph, r-topgo, r-bsgenome, r-impute, r-seqpattern) (r-seqlogo, r-motifrg, r-bamsignals, r-mutationalpatterns, r-tximport) (r-rhdf5, r-chipseq, r-sva, r-affy, r-vsn, r-mzid, r-msnid) (r-interactivedisplaybase, r-annotationhub)[home-page]: Likewise. * gnu/packages/bioinformatics.scm (r-txdb-hsapiens-ucsc-hg19-knowngene) (r-go-db, r-bsgenome-hsapiens-1000genomes-hs37d5, r-org-hs-eg-db) (r-org-ce-eg-db, r-org-dm-eg-db, r-org-mm-eg-db) (r-bsgenome-hsapiens-ucsc-hg19, r-bsgenome-mmusculus-ucsc-mm9) (r-bsgenome-mmusculus-ucsc-mm10, r-txdb-mmusculus-ucsc-mm10-knowngene) (r-bsgenome-celegans-ucsc-ce6, r-bsgenome-celegans-ucsc-ce10) (r-bsgenome-dmelanogaster-ucsc-dm3, r-copyhelper)[source, home-page]: Likewise. * gnu/packages/statistics.scm (r-rcurl)[source]: Likewise. * guix/build-system/r.scm (bioconductor-uri): Likewise. * guix/import/cran.scm (%cran-url, bioconductor-package?) (bioconductor-data-package?, bioconductor-experiment-package?): Likewise.
* gnu: r-tidyr: Update to 0.7.2.Ricardo Wurmus2017-10-17
| | | | * gnu/packages/statistics.scm (r-tidyr): Update to 0.7.2.
* gnu: r-tidyselect: Update to 0.2.2.Ricardo Wurmus2017-10-17
| | | | * gnu/packages/statistics.scm (r-tidyselect): Update to 0.2.2.
* gnu: r-rcpparmadillo: Update to 0.8.100.1.0.Ricardo Wurmus2017-10-17
| | | | | * gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.8.100.1.0. [native-inputs]: Add r-knitr.
* gnu: r-data-table: Update to 1.10.4-2.Ricardo Wurmus2017-10-17
| | | | * gnu/packages/statistics.scm (r-data-table): Update to 1.10.4-2.
* gnu: r-chron: Update to 2.3-51.Ricardo Wurmus2017-10-17
| | | | * gnu/packages/statistics.scm (r-chron): Update to 2.3-51.
* gnu: r-dplyr: Update to 0.7.4.Ricardo Wurmus2017-10-17
| | | | * gnu/packages/statistics.scm (r-dplyr): Update to 0.7.4.
* gnu: Add r-ggdendro.Roel Janssen2017-10-11
| | | | * gnu/packages/statistics.scm (r-ggdendro): New variable.
* gnu: r-lme4: Update to 1.1-14.Ricardo Wurmus2017-09-28
| | | | * gnu/packages/statistics.scm (r-lme4): Update to 1.1-14.
* gnu: r-doparallel: Update to 1.0.11.Ricardo Wurmus2017-09-28
| | | | * gnu/packages/statistics.scm (r-doparallel): Update to 1.0.11.
* gnu: r-checkmate: Update to 1.8.4.Ricardo Wurmus2017-09-28
| | | | * gnu/packages/statistics.scm (r-checkmate): Update to 1.8.4.
* gnu: r-backports: Update to 1.1.1.Ricardo Wurmus2017-09-28
| | | | * gnu/packages/statistics.scm (r-backports): Update to 1.1.1.
* gnu: r-minimal: Update to 3.4.2.Ricardo Wurmus2017-09-28
| | | | * gnu/packages/statistics.scm (r-minimal): Update to 3.4.2.
* gnu: r-glmnet: Update to 2.0-13.Ricardo Wurmus2017-09-24
| | | | * gnu/packages/statistics.scm (r-glmnet): Update to 2.0-13.
* gnu: r-segmented: Update to 0.5-2.2.Ricardo Wurmus2017-09-24
| | | | * gnu/packages/statistics.scm (r-segmented): Update to 0.5-2.2.
* gnu: r-mgcv: Update to 1.8-22.Ricardo Wurmus2017-09-24
| | | | * gnu/packages/statistics.scm (r-mgcv): Update to 1.8-22.
* gnu: r-glmnet: Update to 2.0-12.Ricardo Wurmus2017-09-18
| | | | * gnu/packages/statistics.scm (r-glmnet): Update to 2.0-12.
* gnu: r-lambda-r: Update to 1.2.Ricardo Wurmus2017-09-18
| | | | * gnu/packages/statistics.scm (r-lambda-r): Update to 1.2.
* gnu: r-gridextra: Update to 2.3.Ricardo Wurmus2017-09-18
| | | | * gnu/packages/statistics.scm (r-gridextra): Update to 2.3.
* gnu: r-dplyr: Update to 0.7.3.Ricardo Wurmus2017-09-18
| | | | * gnu/packages/statistics.scm (r-dplyr): Update to 0.7.3.
* gnu: r-crayon: Update to 1.3.4.Ricardo Wurmus2017-09-18
| | | | * gnu/packages/statistics.scm (r-crayon): Update to 1.3.4.
* gnu: r-svglite: Update to 1.2.1.Ricardo Wurmus2017-09-18
| | | | * gnu/packages/statistics.scm (r-svglite): Update to 1.2.1.
* gnu: r-mgcv: Update to 1.8-21.Ricardo Wurmus2017-09-18
| | | | * gnu/packages/statistics.scm (r-mgcv): Update to 1.8-21.
* gnu: r-caret: Update to 6.0-77.Ricardo Wurmus2017-09-18
| | | | | * gnu/packages/statistics.scm (r-caret): Update to 6.0-77. [propagated-inputs]: Remove r-car; add r-recipes and r-withr.
* gnu: r-rstudioapi: Update to 0.7.Ricardo Wurmus2017-09-18
| | | | * gnu/packages/statistics.scm (r-rstudioapi): Update to 0.7.
* gnu: r-openssl: Update to 0.9.7.Ricardo Wurmus2017-09-18
| | | | | * gnu/packages/statistics.scm (r-openssl): Update to 0.9.7. [inputs]: Replace openssl with libressl.
* gnu: r-tidyr: Update to 0.7.1.Ricardo Wurmus2017-09-05
| | | | * gnu/packages/statistics.scm (r-tidyr): Update to 0.7.1.
* gnu: r-gdtools: Update to 0.1.6.Ricardo Wurmus2017-09-05
| | | | * gnu/packages/statistics.scm (r-gdtools): Update to 0.1.6.
* gnu: r-minimal: Update to 3.4.1.Ricardo Wurmus2017-09-01
| | | | * gnu/packages/statistics.scm (r-minimal): Update to 3.4.1.
* gnu: r-tidyr: Update to 0.7.0.Ricardo Wurmus2017-09-01
| | | | | | * gnu/packages/statistics.scm (r-tidyr): Update to 0.7.0. [propagated-inputs]: Remove r-lazyeval; add r-glue, r-purrr, r-rlang, and r-tidyselect.
* gnu: Add r-tidyselect.Ricardo Wurmus2017-09-01
| | | | * gnu/packages/statistics.scm (r-tidyselect): New variable.
* gnu: r-tclust: Update to 1.3-1.Ricardo Wurmus2017-09-01
| | | | * gnu/packages/statistics.scm (r-tclust): Update to 1.3-1.
* gnu: r-fastcluster: Update to 1.1.24.Ricardo Wurmus2017-09-01
| | | | * gnu/packages/statistics.scm (r-fastcluster): Update to 1.1.24.
* gnu: r-rcpparmadillo: Update to 0.7.960.1.2.Ricardo Wurmus2017-09-01
| | | | * gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.960.1.2.
* gnu: r-plotrix: Update to 3.6-6.Ricardo Wurmus2017-09-01
| | | | * gnu/packages/statistics.scm (r-plotrix): Update to 3.6-6.
* gnu: r-httr: Update to 1.3.1.Ricardo Wurmus2017-09-01
| | | | | * gnu/packages/statistics.scm (r-httr): Update to 1.3.1. [propagated-inputs]: Remove r-digest and r-stringr.
* gnu: r-commonmark: Update to 1.4.Ricardo Wurmus2017-09-01
| | | | * gnu/packages/statistics.scm (r-commonmark): Update to 1.4.
* gnu: r-ade4: Update to 1.7-8.Ricardo Wurmus2017-09-01
| | | | * gnu/packages/statistics.scm (r-ade4): Update to 1.7-8.
* gnu: r-tibble: Update to 1.3.4.Ricardo Wurmus2017-09-01
| | | | * gnu/packages/statistics.scm (r-tibble): Update to 1.3.4.
* gnu: r-rlang: Update to 0.1.2.Ricardo Wurmus2017-09-01
| | | | * gnu/packages/statistics.scm (r-rlang): Update to 0.1.2.
* gnu: r-knitr: Update to 1.17.Ricardo Wurmus2017-09-01
| | | | * gnu/packages/statistics.scm (r-knitr): Update to 1.17.
* gnu: r-bh: Update to 1.65.0-1.Ricardo Wurmus2017-09-01
| | | | * gnu/packages/statistics.scm (r-bh): Update to 1.65.0-1.
* gnu: r-scales: Update to 0.5.0.Ricardo Wurmus2017-09-01
| | | | | * gnu/packages/statistics.scm (r-scales): Update to 0.5.0. [propagated-inputs]: Add r-r6 and r-viridislite.
* gnu: r-mgcv: Update to 1.8-19.Ricardo Wurmus2017-09-01
| | | | * gnu/packages/statistics.scm (r-mgcv): Update to 1.8-19.
* gnu: r-matrix: Update to 1.2-11.Ricardo Wurmus2017-09-01
| | | | * gnu/packages/statistics.scm (r-matrix): Update to 1.2-11.
* gnu: Add r-dbplyr.Ricardo Wurmus2017-08-31
| | | | * gnu/packages/statistics.scm (r-dbplyr): New variable.
* gnu: r-minimal: Remove timestamp from man page.Ricardo Wurmus2017-08-28
| | | | | | * gnu/packages/statistics.scm (r-minimal)[arguments]: Adjust "build-reproducibly" phase to prevent the bundled help2man script from printing the current month and year.
* gnu: pspp: Update to 1.0.1.Efraim Flashner2017-08-28
| | | | * gnu/packages/statistics.scm (pspp): Update to 1.0.1.
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