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* gnu: Use 'install-file' instead of 'mkdir-p' and 'copy-file' in obvious cases.Ludovic Courtès2015-08-29
| | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/bioinformatics.scm (bedtools, bowtie, bwa, hisat, samtools, plink, star): Use 'install-file' instead of 'mkdir-p' + 'copy-file'. * gnu/packages/check.scm (catch-framework): Likewise. * gnu/packages/code.scm (global): Likewise. * gnu/packages/emacs.scm (magit-svn, haskell-mode, emacs-pdf-tools): Likewise. * gnu/packages/engineering.scm (fastcap, fasthenry): Likewise. * gnu/packages/gnuzilla.scm (nss): Likewise. * gnu/packages/guile.scm (guile-minikanren): Likewise. * gnu/packages/java.scm (swt): Likewise. * gnu/packages/make-bootstrap.scm (%static-binaries): Likewise. * gnu/packages/maths.scm (lpsolve): Likewise. * gnu/packages/mp3.scm (mpc123): Likewise. * gnu/packages/ninja.scm (ninja): Likewise. * gnu/packages/python.scm (python-numpy, python-pyparsing): Likewise. * gnu/packages/screen.scm (dtach): Likewise. * gnu/packages/synergy.scm (synergy): Likewise. * gnu/packages/textutils.scm (utf8proc): Likewise. * gnu/packages/version-control.scm (git-test-sequence): Likewise. * gnu/packages/wicd.scm (wicd): Likewise.
* gnu: Bump python-six to 1.9.0.Cyril Roelandt2015-08-09
| | | | * gnu/packages/python.scm (python-six): Bump to 1.9.0.
* gnu: python-2: Update to 2.7.10.Eric Dvorsak2015-08-06
| | | | | | | | * gnu/packages/patches/python2-sqlite-3.8.4-test-fix.patch, gnu/packages/patches/python-libffi-mips-n32-fix.patch: Remove files. * gnu-system.am (dist_patch_DATA): Remove them. * gnu/packages/python.scm (python-2): Update to 2.7.10. Remove patches. Update comment showing test failures.
* gnu: Move python2-ansible to (gnu packages admin).Eric Dvorsak2015-08-01
| | | | | * gnu/packages/python.scm (python2-ansible): Move to ... * gnu/packages/admin.scm (ansible): ... here.
* gnu: python-ipython: Update to 3.2.1.Federico Beffa2015-08-01
| | | | | | * gnu/packages/python.scm (python-ipython, python2-ipython): Update to 3.2.1. Add optional dependencies required for notebooks. (python-ipython): Fix and enable tests (1 still failing).
* gnu: Add python-terminado.Federico Beffa2015-08-01
| | | | | * gnu/packages/python.scm (python-terminado, python2-terminado): New variables.
* gnu: Add python-ptyprocess.Federico Beffa2015-08-01
| | | | | * gnu/packages/python.scm (python-ptyprocess, python2-ptyprocess): New variables.
* gnu: Add python-mistune.Federico Beffa2015-08-01
| | | | * gnu/packages/python.scm (python-mistune, python2-mistune): New variables.
* gnu: Add python2-ansible.Eric Dvorsak2015-07-31
| | | | | | * gnu/packages/python.scm (python2-ansible): New variable. Signed-off-by: Alex Kost <alezost@gmail.com>
* gnu: Add python-passlib.Eric Dvorsak2015-07-31
| | | | | | * gnu/packages/python.scm (python-passlib, python2-passlib): New variables. Signed-off-by: Alex Kost <alezost@gmail.com>
* gnu: Add python-py-bcrypt.Eric Dvorsak2015-07-31
| | | | | | * gnu/packages/python.scm (python-py-bcrypt, python2-py-bcrypt): New variables. Signed-off-by: Alex Kost <alezost@gmail.com>
* gnu: Add python-paramiko.Eric Dvorsak2015-07-31
| | | | | | * gnu/packages/python.scm (python-paramiko, python2-paramiko): New variables. Signed-off-by: Alex Kost <alezost@gmail.com>
* gnu: Add python-httplib2.Eric Dvorsak2015-07-31
| | | | | | * gnu/packages/python.scm (python-httplib2, python-httplib2): New variables. Signed-off-by: Alex Kost <alezost@gmail.com>
* gnu: Add python-ecdsa.Eric Dvorsak2015-07-31
| | | | | | * gnu/packages/python.scm (python-ecdsa, python2-ecdsa): New variables. Signed-off-by: Alex Kost <alezost@gmail.com>
* gnu: Add python-ccm.Eric Dvorsak2015-07-31
| | | | | | * gnu/packages/python.scm (python-ccm, python2-ccm): New variables. Signed-off-by: Alex Kost <alezost@gmail.com>
* gnu: Add python2-pycrypto.Eric Dvorsak2015-07-31
| | | | | | * gnu/packages/python.scm (python2-pycrypto): New variable. Signed-off-by: Alex Kost <alezost@gmail.com>
* gnu: Add pelican.Christopher Allan Webber2015-07-26
| | | | * gnu/packages/python.scm (pelican): New variable.
* gnu: Add python-blinker.Christopher Allan Webber2015-07-26
| | | | * gnu/packages/python.scm (python-blinker, python2-blinker): New variables.
* gnu: python-pillow: Disable egg compression.Ludovic Courtès2015-07-20
| | | | | | | Partly fixes <http://bugs.gnu.org/20765>. * gnu/packages/python.scm (python-pillow)[arguments]: Rewrite using 'modify-phases'. Add 'disable-egg-compression' phase.
* gnu: Add python-gridmap.Ricardo Wurmus2015-07-20
| | | | * gnu/packages/python.scm (python-gridmap, python2-gridmap): New variables.
* gnu: Add python-psutil.Ricardo Wurmus2015-07-20
| | | | * gnu/packages/python.scm (python-psutil, python2-psutil): New variables.
* gnu: Add python-rpy2.Ricardo Wurmus2015-07-20
| | | | * gnu/packages/python.scm (python-rpy2, python2-rpy2): New variables.
* Merge branch 'core-updates'Mark H Weaver2015-07-19
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| * Merge branch 'master' into core-updatesMark H Weaver2015-07-19
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| * | gnu: python: Set source file times to 1980 to fix test.Mark H Weaver2015-07-15
| | | | | | | | | | | | | | | | | | * gnu/packages/python.scm (python-2)[arguments]: Use 'modify-phases'. Return true from phases where needed. Add 'set-source-file-times-to-1980' phase. Add (ice-9 ftw) to #:modules.
* | | gnu: Add python-feedgenerator.Christopher Allan Webber2015-07-19
| |/ |/| | | | | | | | | | | * gnu/packages/python.scm (python-feedgenerator, python2-feedgenerator): New variables. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* | gnu packages: Clean up synopses and descriptions.Alex Kost2015-07-18
|/ | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/admin.scm, gnu/packages/algebra.scm, gnu/packages/audio.scm, gnu/packages/backup.scm, gnu/packages/base.scm, gnu/packages/bittorrent.scm, gnu/packages/code.scm, gnu/packages/compression.scm, gnu/packages/databases.scm, gnu/packages/enchant.scm, gnu/packages/firmware.scm, gnu/packages/fonts.scm, gnu/packages/freedesktop.scm, gnu/packages/games.scm, gnu/packages/gd.scm, gnu/packages/gl.scm, gnu/packages/gnome.scm, gnu/packages/gsasl.scm, gnu/packages/gstreamer.scm, gnu/packages/gtk.scm, gnu/packages/guile.scm, gnu/packages/haskell.scm, gnu/packages/language.scm, gnu/packages/lesstif.scm, gnu/packages/libreoffice.scm, gnu/packages/linux.scm, gnu/packages/llvm.scm, gnu/packages/maths.scm, gnu/packages/mcrypt.scm, gnu/packages/mit-krb5.scm, gnu/packages/mp3.scm, gnu/packages/ncdu.scm, gnu/packages/networking.scm, gnu/packages/ntp.scm, gnu/packages/ocaml.scm, gnu/packages/openbox.scm, gnu/packages/pdf.scm, gnu/packages/perl.scm, gnu/packages/pretty-print.scm, gnu/packages/pulseaudio.scm, gnu/packages/python.scm, gnu/packages/rdesktop.scm, gnu/packages/rdf.scm, gnu/packages/ruby.scm, gnu/packages/slang.scm, gnu/packages/slim.scm, gnu/packages/telephony.scm, gnu/packages/tls.scm, gnu/packages/tmux.scm, gnu/packages/tre.scm, gnu/packages/unrtf.scm, gnu/packages/version-control.scm, gnu/packages/vpn.scm, gnu/packages/web.scm, gnu/packages/wget.scm, gnu/packages/xdisorg.scm, gnu/packages/xfce.scm, gnu/packages/xiph.scm: Fix typos. Trim long lines. Add missing periods in the end of sentences. Use double spaces between sentences. Remove trailing whitespaces.
* gnu: python-testtools: make python-mimeparse a propagated inputCyril Roelandt2015-07-08
| | | | | * gnu/packages/python.scm (python-testtools): move python-mimeparse from inputs to propagated-inputs.
* gnu: Move content of openssl module into tls module.Andreas Enge2015-07-05
| | | | | | | | | | | | | | * gnu/packages/openssl.scm (openssl, perl-net-ssleay): Move to... * gnu/packages/tls.scm: ...here. * gnu/packages/openssl.scm: Delete file. * gnu-system.am (GNU_SYSTEM_MODULES): Unregister deleted file. * gnu/packages/{admin.scm, bittorrent.scm, certs.scm, ci.scm, cyrus-sasl.scm, databases.scm, dns.scm, ebook.scm, enlightenment.scm, gnunet.scm, libreoffice.scm, links.scm, mail.scm, messaging.scm, networking.scm, ntp.scm, openldap.scm, package-management.scm, pdf.scm, python.scm, qt.scm, rdesktop.scm, rdf.scm, ruby.scm, ssh.scm, synergy.scm, tor.scm, version-control.scm, video.scm, vpn.scm, w3m.scm, web.scm, weechat.scm, xiph.scm}: Adapt module import.
* gnu: python-mccabe: Fix license field.Eric Bavier2015-06-29
| | | | | * gnu/packages/python.scm (python-mccabe)[license]: 'expat' -> 'license:expat'.
* gnu: Add python-flake8.Cyril Roelandt2015-06-30
| | | | * gnu/packages/python.scm (python-flake8, python2-flake8): New variables.
* gnu: Add python-mccabe.Cyril Roelandt2015-06-30
| | | | * gnu/packages/python.scm (python-mccabe, python2-mccabe): New variables.
* gnu: Add python-pyflakes.Cyril Roelandt2015-06-30
| | | | * gnu/packages/python.scm (python-pyflakes, python2-pyflakes): New variables.
* gnu: Add python-pep8.Cyril Roelandt2015-06-30
| | | | * gnu/packages/python.scm (python-pep8, python2-pep8): New variables.
* gnu: Add python2-fastlmm.Ricardo Wurmus2015-06-26
| | | | * gnu/packages/python.scm (python2-fastlmm): New variable.
* gnu: Add python2-pysnptools.Ricardo Wurmus2015-06-26
| | | | * gnu/packages/python.scm (python2-pysnptools): New variable.
* gnu: Replace versioned gfortran inputs with just "gfortran".Ricardo Wurmus2015-06-25
| | | | | | | | | | | | | | | * gnu/packages/julia.scm (julia)[inputs]: Replace "gfortran-4.8" with "gfortran". * gnu/packages/machine-learning.scm (randomjungle)[native-inputs]: Likewise. * gnu/packages/maths.scm (arpack-ng, lapack, petsc, superlu) (superlu-dist, openblas, openspecfun, atlas)[inputs]: Likewise. (octave)[native-inputs]: Likewise. (gmsh)[propagated-inputs]: Likewise. * gnu/packages/mpi.scm (openmpi)[inputs]: Likewise. * gnu/packages/python.scm (python-numpy-bootstrap)[native-inputs]: Likewise. * gnu/packages/python.scm (python-scipy)[native-inputs]: Likewise. * gnu/packages/statistics.scm (r)[inputs]: Replace "gfortran-4.9" with "gfortran".
* gnu: python-scikit-learn: Update to 0.16.1.Ricardo Wurmus2015-06-15
| | | | * gnu/packages/python.scm (python-scikit-learn): Update to 0.16.1.
* gnu: python-scikit-learn: Use OpenBLAS instead of ATLAS.Ricardo Wurmus2015-06-15
| | | | | | | * gnu/packages/python.scm (python-scikit-learn)[inputs]: Replace "atlas" with "openblas". * gnu/packages/python.scm (python-scikit-learn)[arguments]: Remove build phase 'set-environment-variables, which is only needed when ATLAS is used.
* gnu: python-scipy: Build with OpenBLAS and lapack.Ricardo Wurmus2015-06-15
| | | | | | | * gnu/packages/python.scm (python-scipy)[inputs]: Remove "atlas", add "lapack" and "openblas". * gnu/packages/python.scm (python-scipy)[arguments]: Replace phase "set-environment-variables" with "configure-openblas".
* gnu: python-numpy-bootstrap: Add lapack to inputs.Ricardo Wurmus2015-06-15
| | | | | * gnu/packages/python.scm (python-numpy-bootstrap)[inputs]: Add lapack to inputs, because OpenBLAS does not include lapack functions.
* gnu: python: Disable ssl test that fails with openssl-1.0.2b.Mark H Weaver2015-06-13
| | | | | | * gnu/packages/patches/python-disable-ssl-test.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/python.scm (python): Add patch.
* gnu: python-numpy: Build against OpenBLAS.Ricardo Wurmus2015-06-07
| | | | | | | | | * gnu/packages/python.scm (python-numpy)[inputs]: Use "openblas" instead of "atlas". * gnu/packages/python.scm (python-numpy)[arguments]: Configure build against OpenBLAS. Modified-By: Mark H Weaver <mhw@netris.org>
* python-pillow: Update to 2.8.1, remove duplicated ones.宋文武2015-05-29
| | | | | | * gnu/packages/python.scm (python-pillow): Update to 2.8.1. [inputs]: Add freetype and libwebp. (python-pillow, python2-pillow): Remove duplicated variables.
* gnu: dbus-glib: Propagate inputs dbus and glib.Andreas Enge2015-05-23
| | | | | | | | | | | * gnu/packages/glib.scm (dbus-glib): Propagate inputs dbus and glib. * gnu/packages/audio.scm (patchage), gnu/packages/gnuzilla.scm (icecat), gnu/packages/python.scm (python-dbus): Drop inputs dbus and glib. * gnu/packages/gnome.scm (colord, gconf, gnome-vfs, upower), gnu/packages/mail.scm (claws-mail), gnu/packages/messaging.scm (hexchat), gnu/packages/wicd.scm (wicd): Drop input dbus.
* gnu: Add python-rq.Ricardo Wurmus2015-05-22
| | | | * gnu/packages/python.scm (python-rq, python2-rq): New variables.
* gnu: Add python-redis.Ricardo Wurmus2015-05-22
| | | | * gnu/packages/python.scm (python-redis, python2-redis): New variables.
* gnu: Add python-click.Ricardo Wurmus2015-05-22
| | | | * gnu/packages/python.scm (python-click, python2-click): New variables.
* gnu: Add python-pyzmq.Ricardo Wurmus2015-05-22
| | | | * gnu/packages/python.scm (python-pyzmq, python2-pyzmq): New variables.
* gnu: Add python-seaborn.Ricardo Wurmus2015-05-15
| | | | * gnu/packages/python.scm (python-seaborn, python2-seaborn): New variables.
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