| Commit message (Collapse) | Author | Age |
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* gnu/packages/bioinformatics.scm (bedtools, bowtie, bwa, hisat, samtools,
plink, star): Use 'install-file' instead of 'mkdir-p' + 'copy-file'.
* gnu/packages/check.scm (catch-framework): Likewise.
* gnu/packages/code.scm (global): Likewise.
* gnu/packages/emacs.scm (magit-svn, haskell-mode, emacs-pdf-tools):
Likewise.
* gnu/packages/engineering.scm (fastcap, fasthenry): Likewise.
* gnu/packages/gnuzilla.scm (nss): Likewise.
* gnu/packages/guile.scm (guile-minikanren): Likewise.
* gnu/packages/java.scm (swt): Likewise.
* gnu/packages/make-bootstrap.scm (%static-binaries): Likewise.
* gnu/packages/maths.scm (lpsolve): Likewise.
* gnu/packages/mp3.scm (mpc123): Likewise.
* gnu/packages/ninja.scm (ninja): Likewise.
* gnu/packages/python.scm (python-numpy, python-pyparsing): Likewise.
* gnu/packages/screen.scm (dtach): Likewise.
* gnu/packages/synergy.scm (synergy): Likewise.
* gnu/packages/textutils.scm (utf8proc): Likewise.
* gnu/packages/version-control.scm (git-test-sequence): Likewise.
* gnu/packages/wicd.scm (wicd): Likewise.
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* gnu/packages/python.scm (python-six): Bump to 1.9.0.
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* gnu/packages/patches/python2-sqlite-3.8.4-test-fix.patch,
gnu/packages/patches/python-libffi-mips-n32-fix.patch: Remove files.
* gnu-system.am (dist_patch_DATA): Remove them.
* gnu/packages/python.scm (python-2): Update to 2.7.10. Remove patches.
Update comment showing test failures.
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* gnu/packages/python.scm (python2-ansible): Move to ...
* gnu/packages/admin.scm (ansible): ... here.
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* gnu/packages/python.scm (python-ipython, python2-ipython): Update to 3.2.1.
Add optional dependencies required for notebooks.
(python-ipython): Fix and enable tests (1 still failing).
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* gnu/packages/python.scm (python-terminado, python2-terminado): New
variables.
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* gnu/packages/python.scm (python-ptyprocess, python2-ptyprocess): New
variables.
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* gnu/packages/python.scm (python-mistune, python2-mistune): New variables.
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* gnu/packages/python.scm (python2-ansible): New variable.
Signed-off-by: Alex Kost <alezost@gmail.com>
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* gnu/packages/python.scm (python-passlib, python2-passlib): New variables.
Signed-off-by: Alex Kost <alezost@gmail.com>
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* gnu/packages/python.scm (python-py-bcrypt, python2-py-bcrypt): New variables.
Signed-off-by: Alex Kost <alezost@gmail.com>
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* gnu/packages/python.scm (python-paramiko, python2-paramiko): New variables.
Signed-off-by: Alex Kost <alezost@gmail.com>
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* gnu/packages/python.scm (python-httplib2, python-httplib2): New variables.
Signed-off-by: Alex Kost <alezost@gmail.com>
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* gnu/packages/python.scm (python-ecdsa, python2-ecdsa): New variables.
Signed-off-by: Alex Kost <alezost@gmail.com>
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* gnu/packages/python.scm (python-ccm, python2-ccm): New variables.
Signed-off-by: Alex Kost <alezost@gmail.com>
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* gnu/packages/python.scm (python2-pycrypto): New variable.
Signed-off-by: Alex Kost <alezost@gmail.com>
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* gnu/packages/python.scm (pelican): New variable.
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* gnu/packages/python.scm (python-blinker, python2-blinker): New variables.
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Partly fixes <http://bugs.gnu.org/20765>.
* gnu/packages/python.scm (python-pillow)[arguments]: Rewrite using
'modify-phases'. Add 'disable-egg-compression' phase.
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* gnu/packages/python.scm (python-gridmap, python2-gridmap): New variables.
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* gnu/packages/python.scm (python-psutil, python2-psutil): New variables.
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* gnu/packages/python.scm (python-rpy2, python2-rpy2): New variables.
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* gnu/packages/python.scm (python-2)[arguments]: Use 'modify-phases'. Return
true from phases where needed. Add 'set-source-file-times-to-1980' phase.
Add (ice-9 ftw) to #:modules.
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* gnu/packages/python.scm (python-feedgenerator, python2-feedgenerator): New
variables.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/admin.scm, gnu/packages/algebra.scm, gnu/packages/audio.scm,
gnu/packages/backup.scm, gnu/packages/base.scm, gnu/packages/bittorrent.scm,
gnu/packages/code.scm, gnu/packages/compression.scm,
gnu/packages/databases.scm, gnu/packages/enchant.scm,
gnu/packages/firmware.scm, gnu/packages/fonts.scm,
gnu/packages/freedesktop.scm, gnu/packages/games.scm, gnu/packages/gd.scm,
gnu/packages/gl.scm, gnu/packages/gnome.scm, gnu/packages/gsasl.scm,
gnu/packages/gstreamer.scm, gnu/packages/gtk.scm, gnu/packages/guile.scm,
gnu/packages/haskell.scm, gnu/packages/language.scm,
gnu/packages/lesstif.scm, gnu/packages/libreoffice.scm,
gnu/packages/linux.scm, gnu/packages/llvm.scm, gnu/packages/maths.scm,
gnu/packages/mcrypt.scm, gnu/packages/mit-krb5.scm, gnu/packages/mp3.scm,
gnu/packages/ncdu.scm, gnu/packages/networking.scm, gnu/packages/ntp.scm,
gnu/packages/ocaml.scm, gnu/packages/openbox.scm, gnu/packages/pdf.scm,
gnu/packages/perl.scm, gnu/packages/pretty-print.scm,
gnu/packages/pulseaudio.scm, gnu/packages/python.scm,
gnu/packages/rdesktop.scm, gnu/packages/rdf.scm, gnu/packages/ruby.scm,
gnu/packages/slang.scm, gnu/packages/slim.scm, gnu/packages/telephony.scm,
gnu/packages/tls.scm, gnu/packages/tmux.scm, gnu/packages/tre.scm,
gnu/packages/unrtf.scm, gnu/packages/version-control.scm,
gnu/packages/vpn.scm, gnu/packages/web.scm, gnu/packages/wget.scm,
gnu/packages/xdisorg.scm, gnu/packages/xfce.scm, gnu/packages/xiph.scm:
Fix typos. Trim long lines. Add missing periods in the end of sentences.
Use double spaces between sentences. Remove trailing whitespaces.
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* gnu/packages/python.scm (python-testtools): move python-mimeparse from inputs
to propagated-inputs.
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* gnu/packages/openssl.scm (openssl, perl-net-ssleay): Move to...
* gnu/packages/tls.scm: ...here.
* gnu/packages/openssl.scm: Delete file.
* gnu-system.am (GNU_SYSTEM_MODULES): Unregister deleted file.
* gnu/packages/{admin.scm, bittorrent.scm, certs.scm, ci.scm,
cyrus-sasl.scm, databases.scm, dns.scm, ebook.scm, enlightenment.scm,
gnunet.scm, libreoffice.scm, links.scm, mail.scm, messaging.scm,
networking.scm, ntp.scm, openldap.scm, package-management.scm, pdf.scm,
python.scm, qt.scm, rdesktop.scm, rdf.scm, ruby.scm, ssh.scm,
synergy.scm, tor.scm, version-control.scm, video.scm, vpn.scm,
w3m.scm, web.scm, weechat.scm, xiph.scm}: Adapt module import.
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* gnu/packages/python.scm (python-mccabe)[license]: 'expat' ->
'license:expat'.
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* gnu/packages/python.scm (python-flake8, python2-flake8): New variables.
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* gnu/packages/python.scm (python-mccabe, python2-mccabe): New variables.
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* gnu/packages/python.scm (python-pyflakes, python2-pyflakes): New variables.
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* gnu/packages/python.scm (python-pep8, python2-pep8): New variables.
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* gnu/packages/python.scm (python2-fastlmm): New variable.
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* gnu/packages/python.scm (python2-pysnptools): New variable.
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* gnu/packages/julia.scm (julia)[inputs]: Replace "gfortran-4.8" with
"gfortran".
* gnu/packages/machine-learning.scm (randomjungle)[native-inputs]: Likewise.
* gnu/packages/maths.scm (arpack-ng, lapack, petsc, superlu)
(superlu-dist, openblas, openspecfun, atlas)[inputs]: Likewise.
(octave)[native-inputs]: Likewise.
(gmsh)[propagated-inputs]: Likewise.
* gnu/packages/mpi.scm (openmpi)[inputs]: Likewise.
* gnu/packages/python.scm (python-numpy-bootstrap)[native-inputs]: Likewise.
* gnu/packages/python.scm (python-scipy)[native-inputs]: Likewise.
* gnu/packages/statistics.scm (r)[inputs]: Replace "gfortran-4.9" with
"gfortran".
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* gnu/packages/python.scm (python-scikit-learn): Update to 0.16.1.
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* gnu/packages/python.scm (python-scikit-learn)[inputs]: Replace "atlas" with
"openblas".
* gnu/packages/python.scm (python-scikit-learn)[arguments]: Remove build phase
'set-environment-variables, which is only needed when ATLAS is used.
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* gnu/packages/python.scm (python-scipy)[inputs]: Remove "atlas", add "lapack"
and "openblas".
* gnu/packages/python.scm (python-scipy)[arguments]: Replace phase
"set-environment-variables" with "configure-openblas".
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* gnu/packages/python.scm (python-numpy-bootstrap)[inputs]: Add lapack to
inputs, because OpenBLAS does not include lapack functions.
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* gnu/packages/patches/python-disable-ssl-test.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python): Add patch.
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* gnu/packages/python.scm (python-numpy)[inputs]: Use "openblas" instead of
"atlas".
* gnu/packages/python.scm (python-numpy)[arguments]: Configure build against
OpenBLAS.
Modified-By: Mark H Weaver <mhw@netris.org>
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* gnu/packages/python.scm (python-pillow): Update to 2.8.1.
[inputs]: Add freetype and libwebp.
(python-pillow, python2-pillow): Remove duplicated variables.
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* gnu/packages/glib.scm (dbus-glib): Propagate inputs dbus and glib.
* gnu/packages/audio.scm (patchage),
gnu/packages/gnuzilla.scm (icecat),
gnu/packages/python.scm (python-dbus): Drop inputs dbus and glib.
* gnu/packages/gnome.scm (colord, gconf, gnome-vfs, upower),
gnu/packages/mail.scm (claws-mail),
gnu/packages/messaging.scm (hexchat),
gnu/packages/wicd.scm (wicd): Drop input dbus.
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* gnu/packages/python.scm (python-rq, python2-rq): New variables.
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* gnu/packages/python.scm (python-redis, python2-redis): New variables.
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* gnu/packages/python.scm (python-click, python2-click): New variables.
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* gnu/packages/python.scm (python-pyzmq, python2-pyzmq): New variables.
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* gnu/packages/python.scm (python-seaborn, python2-seaborn): New variables.
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