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* Merge branch 'master' into core-updates-frozenMarius Bakke2021-08-12
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | Conflicts: gnu/packages/algebra.scm gnu/packages/games.scm gnu/packages/golang.scm gnu/packages/kerberos.scm gnu/packages/mail.scm gnu/packages/python.scm gnu/packages/ruby.scm gnu/packages/scheme.scm gnu/packages/tex.scm gnu/packages/tls.scm gnu/packages/version-control.scm
| * gnu: rapidjson: Adjust for GCC 10.Marius Bakke2021-08-11
| | | | | | | | * gnu/packages/patches/rapidjson-gcc-compat.patch: Add additional patch.
| * gnu: rocm-opencl-runtime: Shorten patch file name.Ludovic Courtès2021-08-11
| | | | | | | | | | | | | | | | | | | | This appeases 'guix lint -c patch-file-names'. * gnu/packages/patches/rocm-opencl-runtime-3.10.0-add-rocclr-include-directories.patch: Rename to... * gnu/packages/patches/rocm-opencl-runtime-3.10.0-includes.patch: ... this. * gnu/packages/rocm.scm (rocm-opencl-runtime)[source]: Adjust accordingly. * gnu/local.mk (dist_patch_DATA): Likewise.
| * gnu: Add rocm-opencl-runtime.Lars-Dominik Braun2021-08-08
| | | | | | | | | | | | | | | | | | * gnu/packages/rocm.scm (rocm-opencl-runtime): New variable. * gnu/packages/patches/rocm-opencl-runtime-3.10.0-add-rocclr-include-directories.patch, gnu/packages/patches/rocm-opencl-runtime-4.3-noclinfo.patch, gnu/packages/patches/rocm-opencl-runtime-4.3-nocltrace.patch, gnu/packages/patches/rocm-opencl-runtime-4.3-noopencl.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
| * gnu: Add rocm-comgr.Lars-Dominik Braun2021-08-08
| | | | | | | | | | | | * gnu/packages/rocm.scm (rocm-comgr): New variable. * gnu/packages/patches/rocm-comgr-3.1.0-dependencies.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
| * gnu: Add llvm-for-rocm.Lars-Dominik Braun2021-08-08
| | | | | | | | | | | | | | | | * gnu/packages/rocm.scm (llvm-for-rocm): New variable. * gnu/packages/patches/llvm-roc-3.0.0-add_libraries.patch, gnu/packages/patches/llvm-roc-4.0.0-remove-isystem-usr-include.patch, gnu/packages/patches/llvm-roc-4.2.0-add_Object.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
| * gnu: restic: Patch tests for go-1.16.Sarah Morgensen2021-08-05
| | | | | | | | | | | | | | | | | | * gnu/packages/patches/restic-0.9.6-fix-tests-for-go1.15.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/backup.scm (restic): Use it. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
| * gnu: pypy3: Update to 7.3.5.Maxim Cournoyer2021-08-05
| | | | | | | | | | | | | | | | | | | | The patch disabling tests is removed because it only fixes 2 out of 43 test failures. * gnu/packages/patches/pypy3-7.3.1-fix-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): De-register it. * gnu/packages/python.scm (pypy3): Update to 7.3.5. [patches]: Remove patch.
| * gnu: Rename u-boot-sifive-fu540 to sifive-unleashed.Pierre Langlois2021-08-05
| | | | | | | | | | | | | | | | * gnu/packages/bootloaders.scm (u-boot-sifive-fu540): Rename to ... (u-boot-sifive-unleashed): ... this. Change board name from sifive_fu540 to sifive_unleashed. * gnu/packages/patches/u-boot-riscv64-fix-extlinux.patch: Rename sifive_fu540 to sifive_unleashed.
| * gnu: Add python-pytorch.Ludovic Courtès2021-08-04
| | | | | | | | | | | | | | * gnu/packages/machine-learning.scm (python-pytorch): New variable. * gnu/packages/patches/python-pytorch-runpath.patch, gnu/packages/patches/python-pytorch-system-libraries.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
| * gnu: Add instead.Dmitry Polyakov2021-08-04
| | | | | | | | | | | | * gnu/packages/game-development.scm (instead): New variable. * gnu/packages/patches/instead-use-games-path.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it here.
| * gnu: samba: Update to 4.13.10.Efraim Flashner2021-08-04
| | | | | | | | | | | | | | * gnu/packages/samba.scm (samba): Update to 4.13.10. [source]: Remove patch. * gnu/packages/patches/samba-fix-fcntl-hint-detection.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
| * gnu: Add onnx-optimizer.Ludovic Courtès2021-08-02
| | | | | | | | | | | | * gnu/packages/machine-learning.scm (onnx-optimizer): New variable. * gnu/packages/patches/onnx-optimizer-system-library.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
| * gnu: u-boot: Update to 2021.07.Pierre Langlois2021-08-02
| | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/u-boot-sifive-prevent-reloc-initrd-fdt.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/bootloaders.scm (%u-boot-sifive-prevent-relocating-initrd-fdt): New variable. (u-boot): Update to 2021.07. [native-inputs]: Add python-pycryptodomex. (u-boot-2021.07): Delete variable. (u-boot-tools)[arguments]: Adapt 'patch phase, disable failing test_spl test. (u-boot-sifive-unmatched): Use default u-boot package. (u-boot-pinebook-pro-rk3328): Use default u-boot package.
* | gnu: python-testtools: Update to 2.5.0.Efraim Flashner2021-08-11
| | | | | | | | | | | | | | | | | | * gnu/packages/check.scm (python-testtools): Update to 2.5.0. [propagated-inputs]: Remove python-mimeparse, python-pbr, python-six, python-traceback2, python-unittest2. (python-testtools-bootstrap)[source]: Remove patch. * gnu/packages/patches/python-testtools.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
* | gnu: python-fixtures: Fix building.Efraim Flashner2021-08-11
| | | | | | | | | | | | | | * gnu/packages/check.scm (python-fixtures-bootstrap)[source]: Add patch. * gnu/packages/patches/python-fixtures-remove-monkeypatch-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* | gnu: python-docopt: Fix test suite for pytest-6.Efraim Flashner2021-08-09
| | | | | | | | | | | | * gnu/packages/python-xyz.scm (python-docopt)[source]: Add patch. * gnu/packages/patches/python-docopt-pytest6-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* | gnu: vigra: Update to 1.11.1-0.9b514fa.Leo Famulari2021-07-27
| | | | | | | | | | | | | | * gnu/packages/image.scm (vigra): Update to 1.11.1-0.9b514fa. [source]: Use git-fetch. Remove obsolete patch. * gnu/packages/patches/vigra-python-compat.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* | gnu: gnupg-1: Fix build with gcc-10.Efraim Flashner2021-08-08
| | | | | | | | | | | | * gnu/packages/gnupg.scm (gnupg-1)[source]: Add patch. * gnu/packages/patches/gnupg-1-build-with-gcc10.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* | gnu: ocaml@4.09: Fix link failure.Ludovic Courtès2021-08-05
| | | | | | | | | | | | * gnu/packages/patches/ocaml-4.09-multiple-definitions.patch: New file. * gnu/packages/ocaml.scm (ocaml-4.09)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
* | gnu: ocaml@4.07: Fix link failure.Ludovic Courtès2021-08-05
| | | | | | | | | | | | | | | | | | The link failure shows up when using ld from GNU Binutils 2.37, and not with 2.34. * gnu/packages/patches/ocaml-multiple-definitions.patch: New file. * gnu/packages/ocaml.scm (ocaml-4.07-boot)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
* | gnu: mesa-opencl, mesa-opencl-icd: Build all the LLVM targets again.Ludovic Courtès2021-08-03
| | | | | | | | | | | | | | | | | | Reported by John Kehayias <john.kehayias@protonmail.com> in <https://issues.guix.gnu.org/49794>. * gnu/packages/patches/mesa-opencl-all-targets.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gl.scm (mesa-opencl)[source]: Use it.
* | Merge branch 'master' into core-updates-frozenMarius Bakke2021-08-01
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| * gnu: racket-minimal: Bootstrap from C.Philip McGrath2021-07-31
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This commit bootstraps the Racket compiler and runtime system from source, including Racket CS as well as both variants of Racket BC. (One remaining limitation is discussed in comments added to gnu/packages/racket.scm.) In the process, it moves to building minimal Racket from the Git repository, rather than the packaged source tarballs. The Git repository is slightly better as the ``corresponding source'': 1. A few packages especially closely tied to the Racket core implementation (like "compiler-lib", "base", and "racket-doc") are developed in the same Git repository. Having them use the same Guix origin, too, will help to keep them in sync. 2. The top-level Makefile in the Git repository is an important ``script[] used to control compilation and installation.'' In particular, it cooperates with the "distro-build" package to create the source tarballs and installers for a Racket distribution. (Racket supports a notion of custom distributions.) 3. It is ``the preferred form ... for making modifications'' to the core Racket implementation. Racket releases are tagged in the Git repository (e.g. "v8.1"). At the beginning of each release cycle, a branch is created to stabilizer a version for extra testing. Active development happens on the "master" branch. * gnu/packages/racket-minimal-sh-via-rktio.patch: Adjust for extra directory layer. * gnu/local/racket.scm (cfg-flag:sh-for-rktio, cfg-flag:enable-lt, cfg-flag:enable-racket, unpack-nanopass+stex, %main-repo-main-distribution-pkgs): New private variables. * gnu/local/racket.scm (racket-minimal)[source]: Use Git. [source](snippet): Unbundle nanopass, stex, and libffi. [native-inputs]: Use racket-bootstrap-chez-bootfiles, plus its dependencies (for Chez, plus a Racket for bootstrap pig). [arguments]: Revise extensively. * gnu/local/racket.scm (racket-minimal-bc-3m, racket-minimal-bc-cgc): New packages, hidden at least for now. (racket-bootstrap-chez-bootfiles): Another new package, but this one is especially likely to stay hidden. * gnu/local/racket.scm (racket)[origin](snippet): Unbundle packages developed in the main Git repository, but leave their links.rktd and pkgs.rktd entries in place. [native-inputs]: Add the main Racket Git repository. [arguments](#:phases): Adjust 'unpack-packages to also unpack package sources from the main Racket Git repository. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| * gnu: racket: Unbundle racket-minimal.Philip McGrath2021-07-31
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This change takes advantage of improved support for layered and tethered installations in Racket 8.2. * gnu/packages/racket.scm (extend-layer): New private variable. This is a script for configuring a new config-tethered layer chaining to an existing Racket installation. * gnu/packages/racket.scm (racket)[source](snippet): Unbundle `racket-minimal`. [inputs]: Remove inputs that properly belong to `racket-minimal`. [native-inputs]: Add `racket-minimal` and `extend-layer`. [arguments]: Stop inheriting from `racket-minimal`. Add phase 'unpack-packages to move the sources and links file into place. Replace 'configure phase using `extend-layer`. Replace 'build phase using `raco setup`. Delete 'install phase. * gnu/packages/patches/racket-sh-via-rktio.patch: Rename to ... * gnu/packages/patches/racket-minimal-sh-via-rktio.patch: ... this file to placate `guix lint`. * gnu/local.mk (dist_patch_DATA): Update accordingly. * gnu/packages/racket.scm (racket-minimal)[source]: Likewise. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| * gnu: onnx: Change source to 'git-fetch'.Ludovic Courtès2021-07-31
| | | | | | | | | | | | | | | | * gnu/packages/machine-learning.scm (onnx)[source]: Change to 'git-fetch'. Add "onnx-skip-model-downloads.patch". [arguments]: Add 'make-test-directory-writable' phase. * gnu/packages/patches/onnx-skip-model-downloads.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
| * gnu: python-onnx: Rename to "onnx".Ludovic Courtès2021-07-31
| | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/machine-learning.scm (python-onnx): Rename to... (onnx): ... this, and change 'name' field accordingly. (python-onnx): New variable. * gnu/packages/patches/python-onnx-shared-libraries.patch: Rename to... * gnu/packages/patches/onnx-shared-libraries.patch: ... this. * gnu/packages/patches/python-onnx-use-system-googletest.patch: Rename to... * gnu/packages/patches/onnx-use-system-googletest.patch: ... this. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
| * gnu: python-onnx: Install libonnx.so and libonnx_proto.so.Ludovic Courtès2021-07-31
| | | | | | | | | | | | | | * gnu/packages/patches/python-onnx-shared-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/machine-learning.scm (python-onnx)[source]: Use it. [arguments]: New field.
| * gnu: python-onnx: Move comment to the patch header.Ludovic Courtès2021-07-31
| | | | | | | | | | * gnu/packages/machine-learning.scm (python-onnx): Move patch comment to... * gnu/packages/patches/python-onnx-use-system-googletest.patch: ... here.
| * gnu: Add XNNPACK.Ludovic Courtès2021-07-29
| | | | | | | | | | | | * gnu/packages/machine-learning.scm (xnnpack): New variable. * gnu/packages/patches/xnnpack-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
| * gnu: Add FP16.Ludovic Courtès2021-07-29
| | | | | | | | | | | | * gnu/packages/patches/fp16-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/maths.scm (fp16): New variable.
| * gnu: Add cpuinfo.Ludovic Courtès2021-07-29
| | | | | | | | | | | | * gnu/packages/parallel.scm (cpuinfo): New variable. * gnu/packages/patches/cpuinfo-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
| * gnu: Add pthreadpool.Ludovic Courtès2021-07-29
| | | | | | | | | | | | * gnu/packages/parallel.scm (pthreadpool): New variable. * gnu/packages/patches/pthreadpool-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
| * gnu: Add FXDiv.Ludovic Courtès2021-07-29
| | | | | | | | | | | | * gnu/packages/maths.scm (fxdiv): New variable. * gnu/packages/patches/fxdiv-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* | gnu: glib-networking: Skip failing test.Ludovic Courtès2021-07-31
| | | | | | | | | | | | * gnu/packages/patches/glib-networking-gnutls-binding.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gnome.scm (glib-networking)[source]: Use it.
* | gnu: gnutls: Patch the Guile bindings for EINTR/EAGAIN handling.Ludovic Courtès2021-07-31
| | | | | | | | | | | | * gnu/packages/patches/gnutls-guile-eintr-eagain.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/tls.scm (gnutls)[source]: Use it.
* | gnu: mesa: Update to 21.1.6.John Kehayias2021-07-31
| | | | | | | | | | | | | | | | * gnu/packages/gl.scm (mesa): Update to 21.1.6. * gnu/packages/patches/mesa-skip-tests.patch: Remove cache_test.c as it is no longer needed (test passes). Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* | Merge branch 'master' into core-updates-frozenMarius Bakke2021-07-29
|\| | | | | | | | | | | | | | | | | | | | | | | | | | | Conflicts: gnu/packages/bioinformatics.scm gnu/packages/cmake.scm gnu/packages/curl.scm gnu/packages/emacs-xyz.scm gnu/packages/gpodder.scm gnu/packages/music.scm gnu/packages/patches/glibc-bootstrap-system.patch gnu/packages/python-xyz.scm gnu/packages/shells.scm gnu/packages/statistics.scm
| * gnu: julia-tracker: Patch for julia-1.6.Efraim Flashner2021-07-29
| | | | | | | | | | | | * gnu/packages/julia-xyz.scm (julia-tracker)[source]: Add patch. * gnu/packages/patches/julia-tracker-16-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
| * gnu: glibc-for-bootstrap: Update patch.Franz Josef2021-07-28
| | | | | | | | | | | | | | | | | | | | | | | | There was/is something funny going on with the bootstrap glibc. The symbol for posix_spawnp points to getopt_r. Which in turn leads to a lot of crashed in tests later on. I extended the glibc-bootstrap patch to work around this bug. * gnu/packages/patches/glibc-bootstrap-system.patch: Adjust patch to work correctly with new architectures. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| * gnu: Add marble-qt.Wiktor Żelazny2021-07-25
| | | | | | | | | | | | | | | | * gnu/packages/patches/marble-qt-add-qt-headers.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/geo.scm (marble-qt): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
| * gnu: esmtp: Fix build with libesmtp >= 1.1.0.Tobias Geerinckx-Rice2021-07-24
| | | | | | | | | | | | * gnu/packages/mail.scm (esmtp)[source]: Add patch. * gnu/packages/patches/esmtp-add-lesmtp.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
| * gnu: extempore: Update to 0.8.9.Giacomo Leidi2021-07-21
| | | | | | | | | | | | | | | | | | | | | | * gnu/packages/music.scm (extempore): Update to 0.8.6. [source]: Portaudio is no more in-tree. [arguments]: Load external libraries through patched CMakeLists.txt. [phases]: Symlink assets. * gnu/packages/patches/extempore-unbundle-external-dependencies.patch: Update accordingly. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* | binutils: Fix Loongson workaround.Marius Bakke2021-07-27
| | | | | | | | | | | | | | | | This is a follow-up to 2fa26446a186664c6364de0536380e43113dc95f which inadvertently inverted the value of this variable. * gnu/packages/patches/binutils-loongson-workaround.patch: Flip variable value as it was before 2fa26446a186.
* | gnu: glibc: Remove versions 2.27 and 2.28.Ludovic Courtès2021-07-24
| | | | | | | | | | | | | | | | | | * gnu/packages/base.scm (glibc-2.28, glibc-2.27): Remove. * gnu/packages/patches/glibc-2.27-git-fixes.patch, gnu/packages/patches/glibc-2.27-supported-locales.patch, gnu/packages/patches/glibc-2.28-git-fixes.patch, gnu/packages/patches/glibc-2.28-supported-locales.patch: Remove. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* | gnu: libxml2: Update to 2.9.12.Marius Bakke2021-07-23
| | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/libxml2-parent-pointers.patch, gnu/packages/patches/libxml2-terminating-newline.patch, gnu/packages/patches/libxml2-xpath-recursion-limit.patch: New files. * gnu/packages/patches/python-libxml2-python39-compat.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/xml.scm (libxml2): Update to 2.9.12. (python-lxml)[source](modules, snippet): New fields.
* | gnu: binutils: Update to 2.37.Marius Bakke2021-07-23
| | | | | | | | | | | | | | | | | | * gnu/packages/patches/binutils-loongson-workaround.patch: Adjust for upstream changes. * gnu/packages/patches/binutils-libiberty-endianness-bug.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/base.scm (binutils): Update to 2.37. [source](patches): Remove obsolete patch.
* | gnu: Perl: Update cross-compilation code.Marius Bakke2021-07-23
| | | | | | | | | | | | | | * gnu/packages/perl.scm (perl)[native-inputs]: Update "perl-cross" to 1.3.6. [arguments]: Remove obsolete patch. * gnu/packages/patches/perl-cross.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* | gnu: binutils: Update binutils patch for mingw.Maxime Devos2021-07-23
| | | | | | | | | | | | | | | | | | | | This allows "./pre-inst-env guix build hello --target=x86_64-w64-mingw32" to succeed. The binary can be run successfully under wine. * gnu/packages/patches/binutils-mingw-w64-timestamp.patch: Update to the current version in Debian. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
* | gnu: glibc-2.31: Restore patches.Chris Marusich2021-07-21
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Commit 87961fc965b96ac0c7a5909ac2faab2d023b5339 inadvertently modified the patch set for glibc-2.31. This change restores the original patch set. Fixes: <https://bugs.gnu.org/49516>. * gnu/packages/base.scm (glibc-2.31) [source]: Use the same patches as glibc, but replace glibc-hurd-clock_gettime_monotonic.patch with glibc-2.31-hurd-clock_gettime_monotonic.patch, and add glibc-hurd-signal-sa-siginfo.patch. * gnu/packages/patches/glibc-2.31-hurd-clock_gettime_monotonic.patch: Add it. * gnu/packages/patches/glibc-hurd-signal-sa-siginfo.patch: Add it. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
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