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* gnu: netcdf: Update to 4.7.4.Christopher Baines2020-10-26
| | | | | | | | | | | This will fix an issue building qgis. * gnu/packages/maths.scm (netcdf): Update to 4.7.4. [source]: Remove the netcdf-tst_h_par.patch, also change the naming of the source tarball, as the name seems to have changed for recent releases. [inputs]: Update hdf5 and add curl. * gnu/packages/patches/netcdf-tst_h_par.patch: Delete. * gnu/local.mk (dist_patch_DATA): Remove deleted patch.
* gnu: u-boot: Update to 2020.10.Vagrant Cascadian2020-10-24
| | | | | * gnu/packages/bootloaders (u-boot): Update to 2020.10. * gnu/packages/patches/u-boot-riscv64-fix-extlinux.patch: Refresh patch.
* gnu: rcs: Update to 5.10.0.Efraim Flashner2020-10-23
| | | | | | | | | * gnu/packages/version-control.scm (rcs): Update to 5.10.0. [source]: Update patches. [arguments]: Remove field. * gnu/packages/patches/rcs-5.9.4-noreturn.patch: Remove file. * gnu/packages/patches/rcs-5.10.0-no-stdin.patch: Add file. * gnu/local.mk (dist_patch_DATA): Register changes.
* Revert "gnu: u-boot: Update to 2020.10."Maxim Cournoyer2020-10-23
| | | | | This reverts commit fe6067fc248673d6509b557ff010778f7762382f. This commit broke u-boot-tools.
* gnu: openocd: Update to 9a877a83a1c8b1f105cdc0de46c5cbc4d9e8799e.Malte Frank Gerdes2020-10-22
| | | | | | | | | | | | * gnu/packages/embedded.scm (openocd): Update to 9a877a83a1c8b1f105cdc0de46c5cbc4d9e8799e. [version]: Substitute release with current master. [source]: Remove openocd-nrf52.patch [arguments]: Replace bootstrap build phase. * gnu/local.mk: Remove openocd-nrf52.patch. * gnu/packages/patches/openocd-nrf52.patch: Remove file. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: icecat: Update to 78.4.0-guix0-preview1 [security fixes].Mark H Weaver2020-10-20
| | | | | | | | Includes fixes for CVE-2020-15683 and CVE-2020-15969. * gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update. (icecat-source): Update gnuzilla commit, base version, and hashes. * gnu/packages/patches/icecat-makeicecat.patch: Adapt to new version.
* gnu: Add farstream.Raghav Gururajan2020-10-20
| | | | | | | | * gnu/packages/freedesktop.scm (farstream): New variable. * gnu/packages/patches/farstream-make.patch: New file. * gnu/local.mk (dist_PATCH_DATA): Add it. Signed-off-by: Julien Lepiller <julien@lepiller.eu>
* gnu: u-boot: Update to 2020.10.Vagrant Cascadian2020-10-18
| | | | | * gnu/packages/bootloaders (u-boot): Update to 2020.10. * gnu/packages/patches/u-boot-riscv64-fix-extlinux.patch: Refresh patch.
* gnu: LLVM, Clang: Add 11.0.0.Marius Bakke2020-10-19
| | | | | | | * gnu/packages/patches/clang-11.0-libc-search-path.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/llvm.scm (llvm-11, clang-runtime-11, clang-11, clang-toolchain-11): New variables.
* gnu: xpra: Fix HTML serverLars-Dominik Braun2020-10-17
| | | | | | | | * gnu/packages/patches/xpra-4.0.4-norequests.patch: Add file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (xpra)[patches]: Apply it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: unison: Build with ocaml-4.09.Julien Lepiller2020-10-15
| | | | | | | * gnu/packages/ocaml.scm (unison)[sources]: Add an upstream patch. [native-inputs]: Use ocaml-4.09. * gnu/packages/patches/unison-fix-ocaml-4.08.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* gnu: Add nginx-socket-cloexec.Oleg Pykhalov2020-10-14
| | | | | | * gnu/packages/patches/nginx-socket-cloexec.patch: New file. * gnu/local.mk (dist_patch_DATA): Add this. * gnu/packages/web.scm (nginx-socket-cloexec): New variable.
* Revert "gnu: python-chardet: Enable tests."Marius Bakke2020-10-14
| | | | | | This causes too many rebuilds for the master branch. This reverts commit 331aaf52806b27430c4efaf8f230097ede69e61a.
* gnu: python-chardet: Enable tests.Lars-Dominik Braun2020-10-13
| | | | | | | | | * gnu/packages/python-xyz.scm (python-chardet) [source]: Add upstream patch. [arguments]: Remove. * gnu/packages/patches/python-chardet-3.0.4-pytest.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Marius Bakke <marius@gnu.org>
* gnu: knot: Update to 3.0.1.Tobias Geerinckx-Rice2020-10-13
| | | | | | | | * gnu/packages/dns.scm (knot): Update to 3.0.1. [source]: Remove patch. * gnu/packages/patches/knot-test_net_shortwrite-ensure-connection.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: libcanberra: Fix crashes on wayland.Julien Lepiller2020-10-12
| | | | | | * gnu/packages/patches/libcanberra-wayland-crash.patch: New file. * gnu/packages/libcanberra.scm (libcanberra): Add it. * gnu/local.mk (dist_PATCH_DATA): Add it.
* gnu: sunxi-tools: Fix build.Danny Milosavljevic2020-10-08
| | | | | | * gnu/packages/patches/sunxi-tools-remove-sys-io.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/admin.scm (sunxi-tools-source): Add it.
* gnu: knot: Fix test failure on aarch64-linux.Simon South2020-10-06
| | | | | | | | | | | * gnu/packages/dns.scm (knot)[source]: Apply patch from upstream that helps ensure the "test_net_shortwrite" test suite can complete regardless of platform or configuration. * gnu/packages/patches/knot-test_net_shortwrite-ensure-connection.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
* gnu: lsh: Fix X11 forwarding.Maxim Cournoyer2020-10-05
| | | | | | | | | | | Fixes <https://issues.guix.gnu.org/24049>. * gnu/packages/patches/lsh-fix-x11-forwarding.patch: Add patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/ssh.scm (lsh)[source]: Apply it. [inputs]: Add libxau. Reported-by: myglc2 <myglc2@gmail.com>
* gnu: picard: Update to 2.4.4.raingloom2020-10-05
| | | | | | | | | | | * gnu/packages/music.scm (picard): Update to 2.4.4. [native-inputs]: Add python-dateutil. [source]: Add temporary patch to fix failing test due to missing "." in temporary filename. * gnu/packages/patches/picard-fix-id3-rename-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: konversation: Update to 1.7.6.Tobias Geerinckx-Rice2020-10-05
| | | | | | | | * gnu/packages/kde-internet.scm (konversation): Update to 1.7.6. [source]: Remove obsolete patch. * gnu/packages/patches/konversation-Fix-build-with-Qt-5.11.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: hplip: Update to 3.20.9 [security fixes].Tobias Geerinckx-Rice2020-10-04
| | | | | | | | * gnu/packages/cups.scm (hplip): Update to 3.20.9. [source]: Add hplip-fix-bug-1898438.patch. [arguments]: Follow upstream defaults. * gnu/packages/patches/hplip-fix-bug-1898438.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* gnu: icecat: Update to 78.3.1-guix0-preview1.Mark H Weaver2020-10-03
| | | | | | * gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update. (icecat-source): Update gnuzilla commit, base version, and hashes. * gnu/packages/patches/icecat-makeicecat.patch: Adapt to new version.
* gnu: clamav: Update to 0.103.0.Tobias Geerinckx-Rice2020-10-03
| | | | | * gnu/packages/antivirus.scm (clamav): Update to 0.103.0. * gnu/packages/patches/clamav-system-tomsfastmath.patch: Update patch.
* gnu: liblouisutdml: Update to 2.9.0.Tobias Geerinckx-Rice2020-10-02
| | | | | | | * gnu/packages/language.scm (liblouisutdml): Update to 2.9.0. [source]: Remove patch. * gnu/packages/patches/liblouisutdml-fix-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: grim: Fix output rotation interpretation with Sway 1.4.Tobias Geerinckx-Rice2020-10-02
| | | | | | * gnu/packages/image.scm (grim)[source]: Add patch. * gnu/packages/patches/grim-revert-output-rotation.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* gnu: Remove icecat-68 source.Jonathan Brielmaier2020-09-28
| | | | | | | | | | | | | | It was necessary for icedove@68 which is now based on icecat@78. * gnu/packages/gnuzilla.scm (mozilla-68-compare-locales): Remove. (all-mozilla-68-locales): Remove. (%icecat-68-version): Remove. (icecat-68-source): Remove. * gnu/packages/patches/icecat-68-makeicecat.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Modified-By: Mark H Weaver <mhw@netris.org> Signed-off-by: Mark H Weaver <mhw@netris.org>
* gnu: Add nss@3.56.Jonathan Brielmaier2020-09-28
| | | | | | | | | | | Icedove 78 requires nss > 3.53. This version is the only one building out-of-the-box. * gnu/packages/nss.scm (nss-3.56): New variable. * gnu/packages/patches/nss-3.56-pkgconfig.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Signed-off-by: Mark H Weaver <mhw@netris.org>
* gnu: fplll: Correct include files.Andreas Enge2020-09-23
| | | | | | | * gnu/packages/patches/fplll-std-fenv.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register patch. * gnu/packages/algebra.scm (fplll): Use patch and move all inputs to propagated-inputs.
* gnu: samba: Fix fcntl hint detection in configure script.Pierre Langlois2020-09-22
| | | | | | | | | | | | | | The configure script generates a C program to detect support for lifetime hints on files. But this program could crash, potentially leaving a stale unreadable file behind which could cause the patch-generated-file-shebang phase to fail. Reported upstream <https://bugzilla.samba.org/show_bug.cgi?id=14503>. * gnu/packages/patches/patches/samba-fix-fcntl-hint-detection.patch: New file. * gnu/packages/samba.scm (samba)[origin]: Add patch. * gnu/local.mk (dist_patch_DATA): Register patch.
* gnu: icecat: Update to 78.3.0-guix0-preview1 [security-fixes].Mark H Weaver2020-09-22
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Includes fixes for CVE-2020-15673, CVE-2020-15676, CVE-2020-15677, and CVE-2020-15678. * gnu/packages/gnuzilla.scm (mozilla-compare-locales): Update to RELEASE_8_0_0. (all-mozilla-locales): Update to newer versions. (mozilla-patch): Remove vestigial procedure. (%icecat-version, %icecat-build-id): Update to 78.3.0-guix0-preview1. (icecat-source): Update 'upstream-icecat-base-version', 'gnuzilla-commit', and hashes. Reverse order of makeicecat-patch and gnuzilla-fixes-patch. (icecat)[inputs]: Remove libogg, libvorbis, libvpx, icu4c, sqlite, startup-notification, and zlib. Add several "UNBUNDLE-ME!" comments. [native-inputs]: Update 'rust' and 'cargo' dependencies to version 1.41. Update 'rust-cbindgen' dependency to version 0.14. Update 'node' dependency to 10.22. [arguments]<configure-flags>: Change --enable-default-toolkit value to "cairo-gtk3-wayland". Change --with-unsigned-addon-scopes value to "app,system". Add "--allow-addon-sideload". Remove "--enable-startup-notification" and "--disable-gconf". Comment out "--with-system-zlib", "--with-system-bz2", and "--with-system-icu". <phases>: In the 'remove-bundled-libaries' phase, remove "modules/zlib" from the list of directories to delete. Update the 'patch-cargo-checksums' phase to update more modules. (mozilla-68-compare-locales, all-mozilla-68-locales, %icecat-68-version) (icecat-68-source): New variables preserving the previous icecat 68 source. (icedove)[source]: Use 'icecat-68-source'. * gnu/packages/patches/icecat-makeicecat.patch: Adapt to IceCat 78. * gnu/packages/patches/icecat-68-makeicecat.patch: New file containing the previous 'icecat-makeicecat.patch'. * gnu/local.mk: Add 'icecat-68-makeicecat.patch'.
* gnu: Add java-antlr4-runtime.Julien Lepiller2020-09-20
| | | | | | | | * gnu/packages/java.scm (java-antlr4-runtime): New variable. * gnu/packages/patches/java-antlr4-Add-standalone-generator.patch: New file. * gnu/packages/patches/java-antlr4-fix-code-too-large.java: New file. * gnu/local.mk (dist_patch_DATA): Add them.
* gnu: qemu: Install the full documentation as an info manual.Maxim Cournoyer2020-09-19
| | | | | | | | * gnu/packages/patches/qemu-build-info-manual.patch: Add patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/virtualization.scm (qemu)[source]: Use it. [phases]{install-info}: Remove phase. {create-samba-wrapper}: Add after 'install.
* gnu: gnome-settings-daemon: Add "guix gc" to low disk space notification.Ludovic Courtès2020-09-18
| | | | | | * gnu/packages/patches/gnome-settings-daemon-gc.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gnome.scm (gnome-settings-daemon)[source]: Use it.
* gnu: mailutils: Fix unitialized variable in readmsg.Pierre Langlois2020-09-16
| | | | | | | | | Fixes <https://bugs.gnu.org/43088>. * gnu/packages/patches/mailutils-fix-uninitialized-variable.patch: New file. * gnu/packages/mail.scm (mailutils)[source]: Add patch. * gnu/local.mk (dist_patch_DATA): Register patch.
* genimage: Add patch needed for the test on ARM architectures.Andreas Enge2020-09-08
| | | | | | * gnu/packages/patches/genimage-signedness.patch: New file. * gnu/packages/genimage.scm (genimage)[source]: Add patch. * gnu/local.mk (dist_patch_DATA): Register patch.
* gnu: Update gPodder to 3.10.16 and disable updater.raingloom2020-09-05
| | | | | | | | * gnu/packages/gpodder.scm (gpodder): Update to 3.10.16 and add patch. * gnu/packages/patches/gpodder-disable-updater.patch: New file * gnu/local.mk (dist_patch_DATA): Add patch Signed-off-by: Andreas Enge <andreas@enge.fr>
* gnu: r-httpuv: Unvendor libuv.Lars-Dominik Braun2020-09-04
| | | | | | | | | | | * gnu/packages/cran.scm (r-httpuv) [source]: Remove bundled libuv, add patch. [arguments] Rewrite header locations, fix pipe server issue. [inputs] Add libuv. * gnu/packages/patches/r-httpuv-1.5.4-unvendor-libuv.patch: New file. * gnu/local.mk: Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: xmonad: Add patch to support dynamic linking.Timothy Sample2020-09-02
| | | | | | | | Fixes <https://bugs.gnu.org/43131>. * gnu/packages/patches/xmonad-dynamic-linking.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/wm.scm (xmonad)[source]: Use it.
* gnu: ttfautohint: Update to 1.8.3.Efraim Flashner2020-09-01
| | | | | | | * gnu/packages/fontutils.scm (ttfautohint): Update to 1.8.3. [source]: Remove patch. * gnu/packages/patches/ttfautohint-source-date-epoch.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: xf86-video-sis: Update to 0.12.0.Efraim Flashner2020-09-01
| | | | | | | * gnu/packages/xorg.scm (xf86-video-sis): Update to 0.12.0. [source]: Remove patch. * gnu/packages/patches/xf86-video-sis-xorg-compat.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: wgetpaste: Update bpaste URL & regular expressions.Tobias Geerinckx-Rice2020-09-01
| | | | | | * gnu/packages/wget.scm (wgetpaste)[source]: Add patch. * gnu/packages/patches/wgetpaste-update-bpaste.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* gnu: sooperlooper: Update to 1.7.4.Tobias Geerinckx-Rice2020-08-31
| | | | | | | * gnu/packages/music.scm (sooperlooper): Update to 1.7.4. [source]: Remove upstreamed patch. * gnu/packages/patches/sooperlooper-build-with-wx-30.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: Add fpc.Kei Kebreau2020-08-29
| | | | | | | | | * gnu/packages/pascal.scm: New file. * gnu/packages/patches/fpc-reproducibility.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add pascal.scm. (dist_patch_DATA): Register patch. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* gnu: emacs: Update to 27.1.Mark H Weaver2020-08-28
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/emacs.scm (emacs): Update to 27.1. [source]: In snippet, use 'find-files' to find 'eshell/esh-groups.el' if it exists, but gracefully handle its absence. [arguments]: Add "--with-cairo" to configure-flags. Add 'restore-emacs-pdmp' and 'make-compressed-files-writable' phases. Explicitly return #t from 'install-site-start' phase. [inputs]: Add cairo, pango, harfbuzz, jansson, and gmp. Remove imagemagick. (emacs-next): Remove variable. (emacs-minimal, emacs-xwidgets): Use 'package/inherit'. [arguments]: Remove 'restore-emacs-pdmp' phase. (emacs-no-x): Use 'package/inherit'. [arguments]: Remove "--with-cairo" from configure-flags. Remove 'restore-emacs-pdmp' phase. [inputs]: Remove cairo, pango, and harfbuzz. (emacs-no-x-toolkit): Use 'package/inherit'. [arguments]: Remove 'restore-emacs-pdmp' phase. Remove superfluous quasiquote+unquote-splicing pair. (emacs-wide-int): Use 'package/inherit'. (guile-emacs): Use 'package/inherit'. [arguments]: Remove "--with-cairo" from configure-flags. Remove 'restore-emacs-pdmp' phase. * gnu/packages/patches/emacs-ignore-empty-xim-styles.patch, gnu/packages/patches/emacs-source-date-epoch.patch: Adapt to apply cleanly to emacs-27.1. * gnu/packages/patches/emacs-exec-path.patch: Replace with the previous contents of 'emacs27-exec-path.patch', but remove the superfluous comment about it being "like emacs-exec-path.patch, but for Emacs 27". * gnu/packages/patches/emacs27-exec-path.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove 'emacs27-exec-path.patch'.
* gnu: sssd: Pass '--localstatedir=/var' and '--sysconfdir=/etc'.Ludovic Courtès2020-08-27
| | | | | | | | | | This ensures notably that libnss_sss looks for the mmap cache files in the right place, /var/lib/sss/mc, rather than in the store. * gnu/packages/patches/sssd-system-directories.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/sssd.scm (sssd)[source]: Use it. [arguments]: Pass "--localstatedir" and "--sysconfdir".
* gnu: vcflib: Use shared libraries.Efraim Flashner2020-08-27
| | | | | | | | | | | | | | * gnu/packages/bioinformatics.scm (vcflib)[source]: Add patch. Add snippet to adjust files for new locations. [inputs]: Add fastahack, smithwaterman, tabixpp, xz. [native-inputs]: Add pkg-config. Remove the package-source of fastahack, fsom, smithwaterman, tabixpp. [arguments]: Remove make-flags. Add custom phase to add the output lib directory to the rpath. Adjust custom 'unpack-submodule-sources for the change in native-inputs. Adjust custom 'install phase to also install libraries and headers. * gnu/packages/patches/vcflib-use-shared-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: xorg-server: Update replacement to 1.20.9 [security-fixes].Mark H Weaver2020-08-27
| | | | | | | | | Includes fixes for CVE-2020-1436, CVE-2020-14345, CVE-2020-14346, and CVE-2020-14361. * gnu/packages/xorg.scm (xorg-server/fixed): Update to 1.20.9. * gnu/packages/patches/xorg-server-CVE-2020-14347.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: icecat: Update to 68.12.0-guix0-preview1 [security fixes].Mark H Weaver2020-08-25
| | | | | | | | Includes fixes for CVE-2020-15663, CVE-2020-15664, and CVE-2020-15669. * gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update. (icecat-source): Update gnuzilla commit, base version, and hashes. * gnu/packages/patches/icecat-makeicecat.patch: Adapt to new version.
* gnu: libmhash: Fix use-after-free in tests.Eric Bavier2020-08-20
| | | | | | * gnu/packages/patches/libmhash-hmac-fix-uaf.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/mcrypt.scm (libmhash)[source]: Use it.
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